mRNA_H-akashiwo_Contig1126.5.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1126.5.1
Unique NamemRNA_H-akashiwo_Contig1126.5.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: A0A7S4PZI0_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4PZI0_9DINO)

HSP 1 Score: 427 bits (1099), Expect = 4.250e-147
Identity = 220/314 (70.06%), Postives = 231/314 (73.57%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQSPSAPCRSLRSQLACTSTLTAGASGSQCILVLSAFSTCGWSLSLTFSTTTFKLLLTMKVS------GTTCVVP*NSRQDPR-----------FGIDDIHHNITDGHVLHHIFFTQIPHYHLKGSHRCYCPCHPKVWQG 891
            LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQ                S+L+  A     + +   F + G   S+ F    F  +  + V+        T           R           FGIDDIHHNITDGHVLHHIFFTQIPHYHLK +     P   K  +G
Sbjct:   50 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQ-------------CAVSSLSVVAFS---VGMYFYFDSWGQWFSMYFGPLCFFNMWLVLVTYLQHHDDETLAYDEGEWNYLRGAFETVDRTYGFGIDDIHHNITDGHVLHHIFFTQIPHYHLKEATAAIVPVIQKYGKG 347          
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: A0A6V1NJB0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NJB0_HETAK)

HSP 1 Score: 366 bits (940), Expect = 2.840e-123
Identity = 189/312 (60.58%), Postives = 213/312 (68.27%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQSPSAPCRSLRSQLACTSTLTAGASGSQCILVLSAFSTCGWSLSLTFSTTTFKLLLTMKVSGTTCVVP*NSRQDPR-----------------------FGIDDIHHNITDGHVLHHIFFTQIPHYHLKGSHRCYCP 867
            LRAAIPSHCFVKSLPRSLFYMFRD +AI LCVYFYD FKALGW+GLFIYWNL GF MWCLFVVGHDCGHTSFSNYGWLNDLCGHIC+APL+VPYWPW+RSHHLHHSYHNHT+KDK  PW+++Q+WAQLNAIQ A MECPL+AF GYTWIYLLAGI DGSH SPFSKLFET QQR+Q                S+L+  A          ++S   W L        F + L +    T C+   + R+D                         FGID+IHHN TD HVLHHIFF +IPHYHLK +     P
Sbjct:   30 LRAAIPSHCFVKSLPRSLFYMFRDLVAICLCVYFYDTFKALGWSGLFIYWNLTGFSMWCLFVVGHDCGHTSFSNYGWLNDLCGHICNAPLLVPYWPWKRSHHLHHSYHNHTEKDKGRPWIKEQEWAQLNAIQTAAMECPLYAFFGYTWIYLLAGIRDGSHLSPFSKLFETMQQRIQ-------------CAVSSLSVAAFSVGMYFYFDSWSQ--WFLMYFGPLCFFNMWLAL----TDCL---SHREDQTLAYDEGEWNYLRGAFQTIDRTYGFGIDNIHHNSTDCHVLHHIFF-KIPHYHLKEATAAIVP 318          
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: I2CR09_NANGC (Glycerolipid omega-3 fatty acid desaturase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR09_NANGC)

HSP 1 Score: 268 bits (684), Expect = 2.210e-83
Identity = 142/296 (47.97%), Postives = 180/296 (60.81%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKA-LGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQSPSAPCRSLRSQLACTSTLTAGASG------SQCILVLSAFSTCGWSLSLTF------STTTFKLLLTMKVSGTTCVVP*NSRQDPRFGIDDIHHNITDGHVLHHIFFTQIPHYHLKGS 849
            L+ AIP  CF KSL RS++YM RDF A+      Y + +A  G  GLF++WNLAGFFMWCLFV+GHDCGH SFS Y W ND+CGHICHAPLMVPYWPW++SH LHH YHNH  KD SHPWM Q+ +  L   + A +E PL  F+ YT++YL AG  DGSH  P S LF  T++R+Q   +    L + +     L  GA G      S  ++ L  F+   W   +T+       T  +       + G    +     ++   GIDD+ HNITDGHV HH+FFTQIPHYHLK +
Sbjct:   62 LKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFEDLTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSDTKERIQCAVSTLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFN--AWITMVTYLQHHDEDTKVYAEGEWSYIKGALETID----REYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDA 351          
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: A0A1S7C7R3_9STRA (Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7R3_9STRA)

HSP 1 Score: 264 bits (674), Expect = 1.840e-82
Identity = 139/294 (47.28%), Postives = 175/294 (59.52%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKA-LGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQSPSAPCRSLRSQLACTSTLTAGASGSQC----ILVLSAFSTCGWSLSLTF------STTTFKLLLTMKVSGTTCVVP*NSRQDPRFGIDDIHHNITDGHVLHHIFFTQIPHYHLKGS 849
            ++ AIP  CF KSL RS +YM RDF A+    + Y   +A  G  GLF++WNLAGFFMWCLFV+GHDCGH SFS Y WLND+CGHICHAPLMVPYWPW++SH LHH YHNH  KD SHPWM ++ +  L   + A +E PL  F+ YT++YL AG  DGSH  PFS LF  T++RVQ   +    + +       L  G  G       I V+       W   +T+       T  +       + G    +     ++   GIDD+ HNITDGHV HH+FFTQIPHYHL  +
Sbjct:   12 IKKAIPEKCFQKSLLRSFYYMLRDFAALAALYFVYPTVQAKYGLPGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWLNDICGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTKEVFEDLTPFEQALLENPLSLFIKYTFLYLFAGKMDGSHVVPFSPLFTDTKERVQCAVSTLGMVVAGALVYIGLEGGKEGGMARIGSIYVVPLLVFNAWITMVTYLQHHDEDTKVYAEGEWNYIKGALETID----REYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLTAA 301          
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: A0A6H5JXI4_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXI4_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 1.530e-69
Identity = 124/285 (43.51%), Postives = 164/285 (57.54%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQ-LNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQSPSAPCRSLRSQLACTSTLTAGASGSQCILVLSAFSTCG-WSLSLTFSTTTFKLLLTMKVSGTTCVVP*NSRQDPRFG--IDDIHHNITDGHVLHHIFFTQIPHYHLK 843
            LR  +P  CF+KSLPRSLFYM RD   +    Y Y  + A  W   F++WN  GF +W LFV+GHDCGHT+FSNY W+N L GH+CHAPL+VP+WPW +SH+ HH YHNH +KD S+PW  +Q + Q +       ++ P   F  Y + YLLAG  DGSHF+PFS LF + +++VQ   +    L       S L      +  +  L        W + +T+     +   T   S            D +FG  IDD HHNITDGHV HH+FFT+IPHY+L+
Sbjct:   33 LRKQVPEECFIKSLPRSLFYMARDMGCVLALQYLYPIYVAGSWPLTFLWWNANGFMLWALFVIGHDCGHTTFSNYPWVNALVGHLCHAPLLVPFWPWAKSHNEHHKYHNHVEKDMSYPWFGKQQFEQEVKPFTKLFLKTPFHPFTSYLFTYLLAGWYDGSHFNPFSVLFWSRKEQVQCAVSTASVLTFIYLLVSVLFDFDWSAIVVRHLVPVMIMNYWLVMVTYLQHHEEDTKTFDNSDFHFATAAMETVDRKFGWGIDDAHHNITDGHVAHHLFFTKIPHYNLQ 317          
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: A0A835YPJ0_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ0_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.920e-67
Identity = 126/291 (43.30%), Postives = 163/291 (56.01%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWA-QLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQ---SPSAPCRSLRSQLACT-----STLTAGASGSQCILVLSAFSTCGWSLSLTFSTTTFKLLLTMKVSGTTCVVP*NSRQDPRF--GIDDIHHNITDGHVLHHIFFTQIPHYHL 840
            L+  IP  CF KSL +SLFYM RD   I      Y  +    W   F++WN  GF MW LFVVGHDCGHT+FS Y W+N +CGH+CHAPL+VP+WPW +SHH HHSYHNH +KD S PW R++ +A QL+ +    ++ PL     Y   YL  G  DGSHF+PF  LF+   QRVQ   S  A    L   L        S      +   CI          W + +T+        +T   +  +  V      D ++  G+DD+HHNITDGHV+HH+FFT+IPHY+L
Sbjct:   34 LKRIIPDECFHKSLVKSLFYMVRDMGLICALWKAYPVYVEGNWPLTFVWWNAMGFMMWALFVVGHDCGHTTFSEYTWVNAVCGHLCHAPLLVPFWPWAQSHHQHHSYHNHVEKDHSFPWFRKEQYATQLSGVGRTILKTPLHPLFSYGVSYLFFGYWDGSHFNPFGSLFKNRTQRVQCAVSSLAVALFLGLFLHYVIEYSWSAFAVKYAAPWCIYNY-------WLVMVTYLQHHEPDSITYDDADYSFAVAAMETVDRKYCWGVDDLHHNITDGHVVHHLFFTKIPHYNL 317          
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: A0A4D9DBT0_9STRA (FA_desaturase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBT0_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.430e-64
Identity = 125/296 (42.23%), Postives = 161/296 (54.39%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKA-LGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQSPSAPCRSLRSQLACTSTLTAGASG------SQCILVLSAFSTCGWSLSLTF------STTTFKLLLTMKVSGTTCVVP*NSRQDPRFGIDDIHHNITDGHVLHHIFFTQIPHYHLKGS 849
            L+ AIP  CF KSL RS++YM RDF A+      Y + +A  G  GLF++WNLAGFFMWCLFV+GHDCGH SFS Y W ND+CGHICHAPLMVPYWPW++                            L   + A +E PL  F+ YT++YL AG  DGSH  P S LF  T++R+Q   +    L + +     L  GA G      S  ++ L  F+   W   +T+       T  +       + G    +     ++   GIDD+ HNITDGHV HH+FFTQIPHYHLK +
Sbjct:   12 LKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKD---------------------------LTPFEQALLENPLSLFIKYTFLYLFAGKLDGSHVLPTSPLFSGTKERIQCAVSTLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFN--AWITMVTYLQHHDEDTKVYAEGEWSYIKGALETID----REYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDA 274          
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: A0A7R9YMG6_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YMG6_DIALT)

HSP 1 Score: 209 bits (532), Expect = 8.660e-62
Identity = 122/300 (40.67%), Postives = 160/300 (53.33%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFI-YWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQSPSAPCRSLRSQLACT-STLTAGASGSQCILVLSAFSTCGWSLSLTFSTTTFKLLLTMK------------------VSGTTCVVP*NSRQDPRFGIDDIHHNITDGHVLHHIFFTQIPHYHL 840
            +R  IP  CFVK   RSL+++ RD   +      Y +  A     L++ YWN  GFFMW LFVVGHDCGHT+FSN   LND+CGHI HAPL+VPY+PW  SH  HH YHNH  KD SHPW  +    +L A   + ++ PL  F+ Y  IYL  G  DGSH  P SKL+               S R++L C  ST T  A G+   L   +++T   +    ++  TF L +                     + G    +     +   FG+D +HHNI+DGHV+HH+FFTQ+PHYHL
Sbjct:   29 IRKVIPQECFVKDTGRSLWFLARDLAVLATAPLVYPHVAASANPLLYLAYWNFYGFFMWALFVVGHDCGHTTFSNSKLLNDVCGHIAHAPLLVPYYPWAMSHRRHHMYHNHQKKDASHPWFTKASMPKLPAFTRSFLKSPLAPFLAYP-IYLFEGSFDGSHVFPLSKLYRGA------------STRAKLECAVSTATVLAFGAAAKLACGSWATLALAYGGCYACFTFWLFMVTYFQHHDHGTLVYDDADWSYLKGALQTID----RTYGFGLDSLHHNISDGHVVHHLFFTQVPHYHL 311          
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: A0A4Y5R1E4_9BILA (Delta-12 fatty acid desaturase n=1 Tax=Panagrolaimus rigidus TaxID=591433 RepID=A0A4Y5R1E4_9BILA)

HSP 1 Score: 208 bits (530), Expect = 2.880e-61
Identity = 117/303 (38.61%), Postives = 166/303 (54.79%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKAL-GWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQSPSAPCRSLRSQLACTSTLTAGASGSQCILVLS-AFSTCGWSL---------SLTFSTTTFKLLLTMK---------VSGTTCVVP*NSRQDPR---FGIDDIHHNITDGHVLHHIFFTQIPHYHL 840
            ++ A+P HCF K+  +S++++ +DF+ +G   Y     ++  GWTGL I++   G F   LF VGHDCGH SFSNY WLND+CGHI HAP++ P+WPW++SH  HH Y +H DKDK HPW+ + D    + I     + PL  F  +  IY +AG+ DGSHF P+S+LF  T++R+Q              C        SG  C++  S AF  C +S+          L F      ++  ++           GT   V   ++   R   FG+D   H+ITDGHV HH FFT+IPHY+L
Sbjct:   35 IKNALPPHCFEKNALKSIYFLIQDFVILGALYYILPTVESYAGWTGLLIWYWFTGMFASSLFCVGHDCGHGSFSNYTWLNDICGHIAHAPILAPFWPWQKSHRQHHQYTSHIDKDKGHPWVTENDHLDRDWIAKNFAKFPLSGFFRWNPIYTVAGLPDGSHFWPWSRLFSNTRERIQ--------------CV------VSGGLCLICASVAFYLCNYSIYNFIKYYYVPLLFQGFWMVMITYLQHQDEEIEVYEEGTWNFVKGQAQTIDRYYGFGMDSALHHITDGHVAHHFFFTRIPHYNL 317          
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Match: A0A0R3S3E1_9BILA (FA_desaturase domain-containing protein n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3S3E1_9BILA)

HSP 1 Score: 203 bits (517), Expect = 1.350e-59
Identity = 119/287 (41.46%), Postives = 161/287 (56.10%), Query Frame = 1
Query:    1 LRAAIPSHCFVKSLPRSLFYMFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHTSFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWMRQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFETTQQRVQSPSAPCRSLRSQLACTSTLTAGASGSQCILVLSAFSTCGWS----LSLTFSTTTFKLLLTMKVSGTTCVVP*NSRQDPR---FGIDDIHHNITDGHVLHHIFFTQIPHYHL 840
            +R A+PS CF +SL +SLFY+  DF  +     F   F++ G  GLFI++   G F   LFVVGHDCGH +FS Y W+NDL GHI HA ++ PYWPW++SH  HH Y +H D DK HPW+ ++D+     I     + PL  F+ ++ IY + G+ DGSHF P+SKLF T ++RV       + + S LAC            C +V  AF  C +S    +   +    F+    +   G    V    +   R   FGID + H+ITDGHV HH FFT+IPHYHL
Sbjct:   33 IRRAVPSSCFERSLLKSLFYLVLDFTILYGLYRFVGVFESFGIFGLFIWYCCMGMFGSSLFVVGHDCGHGTFSEYTWVNDLFGHIAHASILAPYWPWQKSHRQHHQYTSHLDNDKGHPWVVEKDFVTRGWIMRNFSKNPLSGFIRWSPIYTIVGLPDGSHFWPYSKLFNTNRERV-------KCVISGLACLF----------CAVV--AFVICNYSWFTFIKYYYIPLLFQGYWLVYEEGYWSYVMGQVQTIDRVYGFGIDTLLHHITDGHVAHHFFFTKIPHYHL 300          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1126.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4PZI0_9DINO4.250e-14770.06Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A6V1NJB0_HETAK2.840e-12360.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
I2CR09_NANGC2.210e-8347.97Glycerolipid omega-3 fatty acid desaturase (Fragme... [more]
A0A1S7C7R3_9STRA1.840e-8247.28Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 R... [more]
A0A6H5JXI4_9PHAE1.530e-6943.51FA_desaturase domain-containing protein n=2 Tax=Ec... [more]
A0A835YPJ0_9STRA1.920e-6743.30Fatty acid desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A4D9DBT0_9STRA1.430e-6442.23FA_desaturase domain-containing protein n=1 Tax=Na... [more]
A0A7R9YMG6_DIALT8.660e-6240.67Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]
A0A4Y5R1E4_9BILA2.880e-6138.61Delta-12 fatty acid desaturase n=1 Tax=Panagrolaim... [more]
A0A0R3S3E1_9BILA1.350e-5941.46FA_desaturase domain-containing protein n=1 Tax=El... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1126contigH-akashiwo_Contig1126:178566..179505 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSC6
Preferred nameFAD2
PFAMsDUF3474,FA_desaturase
Model size940
Max annot lvl2759|Eukaryota
KEGG rclassRC00917
KEGG koko:K10256,ko:K10257,ko:K21704,ko:K21710,ko:K21736
KEGG ReactionR11043,R11044
KEGG Pathwayko01040,ko01212,map01040,map01212
Hectar predicted targeting categorysignal anchor
GOsGO:0000003,GO:0002376,GO:0003674,GO:0003824,GO:0004497,GO:0004768,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006950,GO:0006952,GO:0006955,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016053,GO:0016215,GO:0016491,GO:0016705,GO:0016709,GO:0016717,GO:0016720,GO:0019752,GO:0030176,GO:0030497,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032787,GO:0033559,GO:0040002,GO:0040012,GO:0040017,GO:0042175,GO:0042335,GO:0042389,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0045485,GO:0046394,GO:0048518,GO:0048856,GO:0050183,GO:0050789,GO:0050896,GO:0055114,GO:0065007,GO:0071704,GO:0072330,GO:0098827,GO:1901576
Exons1
Evalue2.24e-51
EggNOG OGsCOG3239@1|root,2QQNB@2759|Eukaryota
EC1.14.18.4,1.14.19.16,1.14.19.22,1.14.19.25,1.14.19.33,1.14.19.34,1.14.19.35,1.14.19.36,1.14.19.6
Descriptionoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
Cds size672
COG categoryI
BRITEko00000,ko00001,ko01000,ko01004
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387090.7056828-UTR-H-akashiwo_Contig1126:178565..1786251681387090.7056828-UTR-H-akashiwo_Contig1126:178565..178625Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1126 178566..178625 +
1681387090.7303863-UTR-H-akashiwo_Contig1126:179297..1795051681387090.7303863-UTR-H-akashiwo_Contig1126:179297..179505Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1126 179298..179505 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387090.7201746-CDS-H-akashiwo_Contig1126:178625..1792971681387090.7201746-CDS-H-akashiwo_Contig1126:178625..179297Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1126 178626..179297 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1126.5.1prot_H-akashiwo_Contig1126.5.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1126 178626..179297 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1126.5.1

>prot_H-akashiwo_Contig1126.5.1 ID=prot_H-akashiwo_Contig1126.5.1|Name=mRNA_H-akashiwo_Contig1126.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=224bp
MFRDFLAIGLCVYFYDNFKALGWTGLFIYWNLAGFFMWCLFVVGHDCGHT
SFSNYGWLNDLCGHICHAPLMVPYWPWRRSHHLHHSYHNHTDKDKSHPWM
RQQDWAQLNAIQAAGMECPLFAFVGYTWIYLLAGICDGSHFSPFSKLFET
TQQRVQSPSAPCRSLRSQLACTSTLTAGASGSQCILVLSAFSTCGWSLSL
TFSTTTFKLLLTMKVSGTTCVVP*
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mRNA from alignment at H-akashiwo_Contig1126:178566..179505+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1126.5.1 ID=mRNA_H-akashiwo_Contig1126.5.1|Name=mRNA_H-akashiwo_Contig1126.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=940bp|location=Sequence derived from alignment at H-akashiwo_Contig1126:178566..179505+ (Heterosigma akashiwo CCMP452)
TTGAGGGCCGCAATCCCCTCCCACTGTTTTGTGAAGAGTTTGCCAAGATC TCTGTTCTACATGTTCAGGGACTTTCTGGCTATCGGTCTGTGCGTCTATT TCtACGACAATTTTAAGGCTCTTGGTTGGACTGGGCTCTTCATTTACTGG AACCTCGCCGGGTTTTTCATGTGGTGCCTGTTTGTTGTCGGTCATGACTG CGGTCATACATCTTTCAGCAATTACGGTTGGTTGAATGATCTCTGTGGCC ATATCTGCCACGCTCCTCTTATGGTTCCGTACTGGCCATGGAGAAGATCT CACCACCTTCACCACAGCTACCACAATCATACGGACAAGGATAAGTCTCA CCCTTGGATGAGACAGCAGGATTGGGCGCAGCTCAACGCAATTCAGGCTG CCGGTATGGAGTGCCCCCTCTTCGCTTTCGTTGGATACACTTGGATCTAC CTGCTTGCCGGCATTTGCGATGGTAGCCACTTCTCCCCTTTCAGCAAGCT GTTCGAGACTACGCAGCAGAGAGTCCAGTCGCCGTCAGCTCCCTGTCGGT CGTTGCGTTCTCAGTTGGCATGTACTTCTACTTTGACAGCTGGGGCCAGT GGTTCTCAATGTATTTTGGTCCTCTCTGCTTTTTCAACATGTGGCTGGTC CTTGTCACTTACCTTCAGCACCACGACATTTAAACTCTTGCTTACGATGA AGGTGAGTGGAACTACCTGCGTGGTGCCTTGAAACAGTCGACAGGACCCA CGGTTTGGCATTGATGACATCCACCACAACATTACCGACGGCCATGTGCT ACACCATATTTTCTTCACTCAGATTCCCCACTATCACCTCAAAGGAAGCC ACCGCTGCTATTGTCCCTGTCATCCAAAAGTATGGCAAGGGCCTCTACAA GCACCAGGAATCCCGGGACTTCTTGTACAAATACTCCAGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1126:178566..179505+

>mRNA_H-akashiwo_Contig1126.5.1 ID=mRNA_H-akashiwo_Contig1126.5.1|Name=mRNA_H-akashiwo_Contig1126.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=672bp|location=Sequence derived from alignment at H-akashiwo_Contig1126:178566..179505+ (Heterosigma akashiwo CCMP452)
ATGTTCAGGGACTTTCTGGCTATCGGTCTGTGCGTCTATTTCtACGACAA
TTTTAAGGCTCTTGGTTGGACTGGGCTCTTCATTTACTGGAACCTCGCCG
GGTTTTTCATGTGGTGCCTGTTTGTTGTCGGTCATGACTGCGGTCATACA
TCTTTCAGCAATTACGGTTGGTTGAATGATCTCTGTGGCCATATCTGCCA
CGCTCCTCTTATGGTTCCGTACTGGCCATGGAGAAGATCTCACCACCTTC
ACCACAGCTACCACAATCATACGGACAAGGATAAGTCTCACCCTTGGATG
AGACAGCAGGATTGGGCGCAGCTCAACGCAATTCAGGCTGCCGGTATGGA
GTGCCCCCTCTTCGCTTTCGTTGGATACACTTGGATCTACCTGCTTGCCG
GCATTTGCGATGGTAGCCACTTCTCCCCTTTCAGCAAGCTGTTCGAGACT
ACGCAGCAGAGAGTCCAGTCGCCGTCAGCTCCCTGTCGGTCGTTGCGTTC
TCAGTTGGCATGTACTTCTACTTTGACAGCTGGGGCCAGTGGTTCTCAAT
GTATTTTGGTCCTCTCTGCTTTTTCAACATGTGGCTGGTCCTTGTCACTT
ACCTTCAGCACCACGACATTTAAACTCTTGCTTACGATGAAGGTGAGTGG
AACTACCTGCGTGGTGCCTTGA
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