mRNA_H-akashiwo_Contig1126.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1126.4.1
Unique NamemRNA_H-akashiwo_Contig1126.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A7S4DBW5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBW5_HETAK)

HSP 1 Score: 308 bits (788), Expect = 4.670e-97
Identity = 145/165 (87.88%), Postives = 157/165 (95.15%), Query Frame = 1
Query:  925 PDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFAWKGDGRAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLHLQAPVEGLKQASAKWARKIDGIMTTQGFQPVAMGLE 1419
            PDSD+WAKAMMEQ+ KWQKRGIGTL++R+PGME++RTRWVFAWK DGRAKARIA KGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEY LD++MDDVVAAFISSELGEDEVYLEVPEGF CPPGYVLHL+A VEGLKQASAKW RKIDGI+TT+GFQPVA GLE
Sbjct:    1 PDSDIWAKAMMEQLGKWQKRGIGTLIQRKPGMEVIRTRWVFAWKDDGRAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYDLDMYMDDVVAAFISSELGEDEVYLEVPEGFDCPPGYVLHLRAAVEGLKQASAKWTRKIDGILTTEGFQPVAKGLE 165          
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A7S3UVC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVC1_HETAK)

HSP 1 Score: 307 bits (787), Expect = 8.970e-97
Identity = 149/174 (85.63%), Postives = 159/174 (91.38%), Query Frame = 1
Query: 1687 EVKAHKPVDVLMDPQLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRDRKSTSVYVFFIGHTTLSWSSRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFP 2208
            EVKAHKPV+V +DP LDLFEE SL++EPRQYQSLIGALTWLTCCTAPTL TAVNRLAQFLVAPTE+HWAAA+AVLAYAHQHLDE+    GGGGLE+RGYADADFA DRDRKSTS YVFFIGHTTLSW+SRKQKG+VLHSTHAELNALLE GKE LHLRQLCGFLL LLQ D FP
Sbjct:    1 EVKAHKPVEVPLDPSLDLFEESSLLKEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAYAHQHLDELXXXXGGGGLEIRGYADADFARDRDRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKETLHLRQLCGFLLLLLQLDQFP 174          
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A146LH62_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LH62_LYGHE)

HSP 1 Score: 271 bits (694), Expect = 1.680e-74
Identity = 250/812 (30.79%), Postives = 378/812 (46.55%), Query Frame = 1
Query:    1 YLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHMYNCTKHKDRGTLTPYEGWHGRKPDLGHLHAFGC--FCVVTKLEREQKASSKMAPRGDPGIFLGLDEIFPPKYVVLNGTTGKEI-RSRSVVFNKNIFTGLARCDLWVAYRDLVDGIEAVTDTPGPAREPXXXXXXXXXTRPTQELRAPQRPLQQEKAASMLPNDPEEEEAEPGDQTGAMAFNPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDQAKEAAVEQFCGLVA-AVEAGPEKITPQSFNQAIDGPDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFAWK----GDGRAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPG--YVLHLQAPVEGLKQASAKWARKIDGIMTTQGFQPVAMGLETCLYYKVKDGIPCFVARYVDDTATGVHPSQHHIYDGLIKALEAEGLELHRLGNLISQKLLGIQVR-AKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVLMDPQL--DLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPD-RDRKSTSVYVFFIGHTTLSWSSRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVITKPM 2394
            +L++ G   E T    P  N  AE A +++  MAR M+L + LP  +W  A   A ++ N   H+      P + W G+K DL HL  FGC  F  + K  R+     K   +    IF+G   +    Y +L+    K I R+R V F +N F            +  V    +V +        XXXXXX    R                  S   + PE EE E   +TGA           EG  R  +R       KPR                   +F G V        E   P+++   +   + D W  AM E+M+   +  +  L  R P  +IV  +WV+  K    G  R KAR+  KGF Q  G+ Y E+FSP ++ +S+RL L L  +  L I   DV  AF+  EL ++ V+++ PEGF        V  L+  + GLKQ+S  W  K++ ++   G++  ++  E C+Y K K      +A YVDD     H  +    D L   LE    ++  LG   ++  LG+++R ++ GT  L LDQ  YI A +++F  +   KPV   ++ +L  D  E    ++    YQ+L+G L +L   T P +  A + L+Q+    T  HW  A  VL Y     +   +   G  L+L G+ D+D+A + RDRKST+ Y F +G   +SW S+KQ  V L ST AE   L EG KEA+HL++L   L  +++ DG  P +I+ DN S + L+      + TKHIDIK  ++++ I+   ++L  + T  M AD++TK +
Sbjct:  243 FLEKSGIRHEVTIPHTPEQNGVAERANRTICEMARSMLLESDLPKPFWAEACSTAVYLKNRQPHRSLDGAIPEQLWTGKKIDLSHLRVFGCTAFAHIPKQFRK-----KFDAKSQQLIFVGYC-LRSKGYRLLDLKNPKRIIRARDVSFIENGFCPGVNSSTSDELQLTVTPASSVLEEXXXXXXXXXXXXXTISDR------------------SSNYSTPEGEEDE---ETGAEL--------EEGVVRYPQRDR-----KPR-------------------EFPGFVLYQAMINEENFDPRTYKDVLSSANKDEWMLAMKEEMSSLLENEVWELTDRPPDAKIVDCKWVYKTKIDTDGKIRYKARLVAKGFSQHYGIDYFETFSPVVRRSSIRLLLSLAAQMDLKIVHFDVQTAFLHGEL-QETVFMKQPEGFSSADSKDQVCRLKKAIYGLKQSSRTWNMKVNDVLIKNGYE--SLKNEACIYMKRKGPSLILIALYVDDFYV-FHNDEKEKND-LFLTLE-RFFKIKDLGE--ARSCLGMRIRRSEDGT--LFLDQAQYIDAVLQRF-HMSECKPVATPLETKLKDDSEELPKTLESSLPYQNLVGCLMYLAVNTRPDIAHAASFLSQYNTCYTVTHWKWAKRVLRYLKGTSNFCLVYRKGCNLKLTGFVDSDWAGNPRDRKSTTGYAFELGGGLISWESKKQPTVALSSTEAEYMGLTEGSKEAIHLQRL---LSEIMKSDG-QPIVIYNDNQSALKLSMNHMFHNRTKHIDIKHHFVRECIENAQVILEYMPTNKMPADMLTKSL 980          
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL)

HSP 1 Score: 271 bits (694), Expect = 2.550e-73
Identity = 241/815 (29.57%), Postives = 380/815 (46.63%), Query Frame = 1
Query:   49 PRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHMYNC--TKHKDRGTLTPYEGWHGRKPDLGHLHAFGCFCVVTKLEREQKASSKMAPRGDPGIFLGLDEIFPPKYVVLNGTTGKEIRSRSVVFNKNIFTGLARCDLW---VAYRDL---VDGIEAVTDTPGPAREPXXXXXXXXXTRPTQELRAPQRPL--QQEKAASMLPNDPEEEEAEPGDQTGAMAFNPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDQAKEAAVEQFCGLVAAVEAGPEKI--------TPQSFNQAIDGPDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFAWK--GDG---RAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCP--PGYVLHLQAPVEGLKQASAKWARKIDGIMTTQGFQPVAMGLETCLYYKVKDGIPCFVARYVDDTATGVHPSQHHIYDGLIKALEAEGLELHRLGNLISQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVLMDPQLDLFE---EGSLMQEPRQ----YQSLIGALTWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRD-RKSTSVYVFFIGHTTLSWSSRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVITKPM 2394
            P +N  AE   ++++  ARCM+  A +P+ YW  AV  +A + N   T+ +D   ++P+E W  +KP L +L  FGC   V  + +E++  SK   R     FLG  +     Y     +TG+ + SR   F ++ F    R  +    V +RD    +DG     D      EP         T  T E    +RP   QQ +     P      E  PG +     ++  L A +E        R++R         SG ++    ++ + ++    L+ ++E   E           P SF  A++  D+  W +A   +    +K     LV    G + + ++WVF  K   +G   R KAR+  KGF Q  GV + E+F+P  K TS+R+ L L  +Y L +   DV  AF++  L E E+Y++ P+G++ P  P +   L+  + GLKQ+   W + ID  M   GF    M  + C+Y K  D    FV  YVDD     +     +     +AL +E  E+  LG L  +  LG++V+    +  + + Q  ++ + + KF  ++  KPV    DP L L +   EG    +       Y++ +GAL +L   T P L  +V  L+QF   P   HW A   VL Y            G    EL GY+DAD+A D + R+STS YV  +    +SW S+KQ+ V L ST AE  AL E  +EA+ L+    F+  L +  G     + +DN   + LA+       TKHIDI+  ++++++++  +VL    T+ MLAD++TKP+
Sbjct:  588 PELNGVAERMNRTLVECARCMLEHAGMPNEYWGEAVTTSAFLRNRLPTRAQDLH-MSPHEVWTKKKPTLANLKVFGCHAYV-HVPKEKR--SKFDARSVLCRFLGYSD-HEKAYRFEELSTGRIVVSRDAQFMEDTFDDGKREQVGGKTVEFRDEDGELDGNSGDEDMNEQPAEP---------TSTTAEQPTRERPQWQQQTQGQRFQPLQQPNAEYPPGAKRILRTYS--LEALSEPPVEKRYGRTSRT--------SGASSVPAPSQSSPLDDTSALLMSIEEEEEYAHVVYSVGDLPTSFKSAMESSDASQWMEACDSEFESLRKNETWELVPLPQGRKAISSKWVFKVKETAEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDE-EIYMKQPDGYIDPKYPNHACKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNM--DHCVYVKRNDSATMFVVIYVDDLILACNNKD--LLAATKRAL-SERFEMSDLGEL--KYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFG-MQDCKPVKTPQDPGLKLTKSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGELIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKS---FMCELGEDSGNGALTVFEDNQGAIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCPTQEMLADLMTKPL 1366          
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A1W7R6G9_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6G9_AEDAL)

HSP 1 Score: 268 bits (686), Expect = 3.620e-73
Identity = 241/827 (29.14%), Postives = 373/827 (45.10%), Query Frame = 1
Query:    1 YLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHMYNCTKHKDRGTLTPYEGWHGRKPDLGHLHAFGCFCVV----TKLEREQKASSKMAPRGDPGIFLGLDEIFPPKYVVLNGTTGKEIRSRSVVF-----------NKNIFTGLARCDLWVAYRDLVDGIEAVT---DTPGPAREPXXXXXXXXXTRPTQELRAPQRPLQQEKAASMLPNDPEEEEAEPGDQTGAMAFNPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDQAKE-AAVEQFCGLVAAVEAGPEKITPQSFNQAIDGPDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFAWKGDG-----RAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVC-PPGYVLHLQAPVEGLKQASAKWARKIDGIMTTQGFQPVAMGLETCLYYKVKDGIPCFVARYVDDTATGVHPSQHHIYDGLIKALEAEGLELHRLGNLISQKLLGIQV-RAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVLMDPQLDLFEEGSLMQEPRQ--YQSLIGALTWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPD-RDRKSTSVYVFFIGHTTLSWSSRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVITKPM 2394
            Y +QEG   + T    P+ N  +E   +S++ MARCMIL A+LP++YW  AV  A ++ N    K   + TPYE W G KPDL HL  FG +  V     K  + Q  S KM       +F+G   +    Y  ++  T K   SR   F           ++         ++    RD  D I  VT   D P P                             E          EE++ +   ++        L  A EG+          + G P    S + T+G   +    V+++C              P+SF +A+  P+ D W +AM E++    +     +V      + V  +WV+  K DG     + KAR+  +GF Q  G  Y E F+P  K T++R  L +     L +   DV +A++  EL E+ +Y+  P GF     G V  L+  + GLKQA   W RKI  ++ + G+ P     + CL+ K + G   F+  YVDD            Y+ ++  L+    +L  LG++     LGI++ R + G  H +LDQ  YI     KF +  A +P  + MDP     ++      PR+  +QSL+GAL ++   T P +  + + L + +  PT+  W  A   L Y     D ++LE+GG G +L  + DAD+A D RDRKS S ++F +G   +SW++RKQ+ + L ST AE  AL E  +E L L++L    +  ++     P I+ +DN SC+ +      S  TKHID +  +I+  +    I +    T  M+AD +TKP+
Sbjct:  266 YCRQEGITQQFTTAYTPQQNGVSERKNRSLVEMARCMILDAQLPNKYWAEAVNTATYVQNRLPTKPIPS-TPYEIWTGEKPDLSHLKIFGSWAYVWIPSEKRSKFQAKSKKM-------LFVGYS-LQHKAYRFIDPETHKLTTSRDCRFLTHREVRETEPSQGSIVSYPFSEISPMNRDKPDEIPDVTADDDVPIPVDHTSDDDWDGDDC--------------SEDDFHGFETANEEDDQDDTIRSDDTVIEQHLPLAIEGQDE--------ISGTPDVRRSNRATKGIAPQRFMTVQEYC-------------EPRSFEEAMRCPERDFWKRAMEEEIQSLHENATWEVVPLPKDRKTVGCKWVYKRKTDGDGNVIQYKARLVAQGFSQRYGTDYDEVFAPVAKQTTVRTLLSIAARRKLQVKHVDVKSAYLYGEL-EETIYMRQPTGFQTGAKGDVCLLRKSLYGLKQAGRIWNRKITEVLRSLGYLPAEA--DPCLFVKKQRGQLSFILLYVDDMLIACQDDGE--YNRIVNTLKMH-FKLTTLGDV--NNYLGIRIERGQDG--HFLLDQSAYIRKIAAKFGQADA-RPSHIPMDPGYPKLQQKEEEPMPRKDDFQSLVGALLYVAVNTRPDIAISTSILGRKVSNPTQADWTEAKRTLRYLKSTAD-LKLELGGPG-QLEAHVDADWAGDHRDRKSNSGFIFHLGGP-ISWAARKQQCISLSSTEAEYVALAEACQELLWLQKL----MKDVEERPNGPIIVREDNQSCIAMLRTEGGSRRTKHIDTRFNFIRDLVSRNVIHVEYCPTGSMIADALTKPL 1030          
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A8H8JF23_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JF23_9AGAM)

HSP 1 Score: 270 bits (690), Expect = 8.810e-73
Identity = 246/819 (30.04%), Postives = 374/819 (45.67%), Query Frame = 1
Query:    1 YLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHMYNCTKHKDRGTLTPYEGWHGRKPDLGHLHAFGCFCVVTKLEREQKASSKMAPRGDPGIFLGLDEIFPPK---YVVLNGTTGKEIRSRSVVFNKNIFTGLARCDLWVAYRDLVDGIEAVTDTPGPAREPXXXXXXXXXTRPTQELRAPQRPLQQEKAASMLPNDPEEEEAEPGDQTGAMAFNPDLIAAAEGKPRSEERRSARLR---GKPRPNYSGKTTRGDQAKEAAVEQFCGLVAAVEAGPEKIT------PQSFNQAIDGPDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFAWKG--DG---RAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLHLQAPVEGLKQASAKWARKIDGIMTTQGFQPVAMGLETCLYYKVKDGIPCFVARYVDDTA-TGVHPSQHHIYDGLIKALEAEGLELHRLGNLISQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVLM--DPQLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDRDR-KSTSVYVFFIGHTTLSWSSRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVITKPM 2394
            YL+ EG   + T+      N  AE A +++    R M   A LPD+YW +A+L+AAH++N T  K     TP E + G+ P+L  L  FGC       +   K  +K+  R     +LG    + P    +V+++  TG+ + SR VVF++    G   C   V + D         DT G   E          T PT +L                P++PE +      ++                    E ++  L      P+P  SG+  R  +   A V     L A  E   + +T      PQSF +A++ PD+++W  AM+ +M   ++  + T V R     +V+ RWVF +K   DG   R KAR+  KGF Q  GV Y+E  SP     SLR  L +     L++   DV  AF+  EL E E+Y+E PEGFV   G V  L+  + GLKQA+  +  ++  I+   GF+      +  ++Y+        +  +VDD    G   S    +   IKA  A+ LE+  LG   ++  +GI++     T  L + QR YI   + +F  +   KP    M   P L   +E ++  +  +YQ LIG+L +    T   +  A   LAQ    P + HW AA  VL Y +  +D   +      LELRGY DAD+A D+   +ST+ + FF+    +++SSRKQ  + L ST AE  A     +E + +RQ    L  L +     PT +  DN S + LA+       TKHI +K  +I++ I    + L  + T   +ADV+TKP+
Sbjct:  644 YLRSEGIQHQKTEADSSPSNGVAERAIRTLNDQQRAMRFDANLPDKYWGYAILHAAHIWNVTPKKRLDGRTPNEVFSGKIPNLSGLRTFGCKAWARVPD---KMRTKLQARSLECHYLG----YAPNRKAHVLVHRPTGRILTSRDVVFDE----GANYCQR-VVFED--------NDT-GTLDE-------DEETEPTHKL-----------TVDFSPDEPETQTPSEHPESXXXXXXXXXXXXXXXXXXXXEIQNQILDLDPDPPQPRRSGRERRPPERYGAPVGASTRL-ATSEGIEDALTVMMESPPQSFQEAMNRPDANLWLAAMLLEMKSIEQHKVWTRVDRPTNKNVVKCRWVFDYKRGPDGEILRYKARLVAKGFSQRPGVDYTEISSPVAAADSLRTLLSIVAALELELLQIDVKTAFLHGELDE-EIYMEQPEGFVEGRGQVWELRKAIYGLKQAARAFYLRLKSILEQMGFKRCET--DHAVFYRRDGEELAIILAHVDDMLLAGTSLS----FLETIKADLAKHLEIVDLGE--AKMFVGIEIERNRSTGTLKISQRRYINDILARFG-MTGCKPCATPMAESPNLPKLDESTI--DRTRYQQLIGSLMYAMISTRADIAYATGLLAQHAANPGKEHWDAAHRVLRYLNSSIDLGIIYHRSDNLELRGYVDADYAGDKSSSRSTTGWAFFLAGGLIAYSSRKQPTISLSSTEAEYVATSSAARELIWIRQFISELGLLPEG----PTTVFSDNQSSIALAKNPANHQNTKHIRVKYHFIREVIALRELDLKYIPTNDQVADVLTKPL 1406          
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A182GFZ6_AEDAL (Integrase catalytic domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GFZ6_AEDAL)

HSP 1 Score: 263 bits (671), Expect = 1.690e-71
Identity = 229/814 (28.13%), Postives = 369/814 (45.33%), Query Frame = 1
Query:    1 YLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHMYNCTKHKDRGTLTPYEGWHGRKPDLGHLHAFGCFC---VVTKLEREQKASSKMAPRGDPGIFLGLDEIFPPKYVVLNGTTGKEIRSRSVVFNKNIFTGLARCDLWVAYRDLVDGIEAVTDTP--GPAREPXXXXXXXXXTRPTQELRAPQRPLQQEKAASMLPNDP----EEEEAEPG-DQTGAMAFNPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDQAKEAAVEQFCGLVAAVEAGPEKITPQSFNQAIDGPDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFAWKGDG-----RAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLHLQAPVEGLKQASAKWARKIDGIMTTQGFQPVAMGLETCLYYKVKDGIPCFVARYVDDTATGVHPSQHHIYDGLIKALEAEGLELHRLGNLISQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVLMDPQLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDR-DRKSTSVYVFFIGHTTLSWSSRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVITKPM 2394
            + ++EG   + T    P+ N  AE   + ++ M RC++  A L   YW  A+  A H+ N +  K    LTPYE WHG KPD+ +L  FG      V  +L ++  A++K        +F+G        Y  L+ +T K I SR V F                       IEA +  P     +E          +  T+E+      ++++    M P       EEEE   G D+ G M    D              R+  L                   E  ++Q   + A +E    +  P++F  A+  P+ D W  AM E++   ++     LV   PG ++V  +W +  K D      R KAR+  +G+ Q  G  + E F+P  +  +LR  L +     + +   D+ +A++ +EL ED +++  P GF      V  L+  + GLKQ++  W +KID    + GF P +   ++CLY + K+G  CF+  YVDD     +  +       I+ L  +  +L  LG+L  ++ LGI+V    G  H  +DQ+ YI   V +F    A KP  V +DP     +E +L+     Y+SL+G+L ++   + P +  + + L + +  P+   W  A  VL Y  +    + L +G G   L  + DAD+A +  DRKS S ++   G   +SW +RKQ  V L ST AE  AL EG +E + L++L    L  LQ +   PTI+ +DN S + + +  R+   +KHID +  + K    +  I +  + T  M AD++TKP+
Sbjct:  221 FYRREGIQVQYTARYSPQQNGVAERKNRYLVEMVRCLLFDANLHQCYWAEALNTAVHLQNISPTKST-KLTPYELWHGTKPDVQNLKVFGSRAWVHVPKELRKKLSATAKEL------VFVGYSSEHKA-YRFLDKSTRKVIVSRDVKF-----------------------IEAESGFPTEDSVKETCKQFLKDASSDDTEEIIIELDSVKKKNFNEMEPLSQDETLEEEEVFYGFDEDGTMLQGID-------------ERTVEL-------------------EGGMQQSLDVTAILENAVSE--PRTFEDALLSPERDAWQTAMQEEIDSLKENHTWELVDLPPGRKVVGCKWTYKKKEDANGKPVRYKARLVAQGYSQRYGTDFDEVFAPVARQATLRTLLTVASRDSMIVKHLDIKSAYLYAELEED-IFMRQPPGFQSGNNKVCRLKKCLYGLKQSARVWNKKIDMFFKSIGFLPGSA--DSCLYVREKNGKHCFIVVYVDDMVIFCNSEEEF---NEIRTLLEKHFKLSSLGDL--RQFLGIRVDKVNG--HYTMDQKGYIEKLVRRFGFEDA-KPSKVPLDPAYVKQKEETLLPTNDSYRSLVGSLLYVAVNSRPDICVSTSLLGRKVSNPSNRDWTEAKRVLRYL-KATQNLRLHLGSGTESLECFVDADWAGNEGDRKSNSGFIIKYGGGLISWGTRKQSCVALSSTEAEFVALSEGCQELIWLKKL----LADLQEERKDPTIVWEDNQSAIRMVQSDRIEKRSKHIDTRHAFTKDLRQKGVIDIRYLPTSQMEADIMTKPL 953          
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A811UW43_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811UW43_CERCA)

HSP 1 Score: 258 bits (659), Expect = 8.630e-71
Identity = 226/807 (28.00%), Postives = 370/807 (45.85%), Query Frame = 1
Query:    1 YLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHMYNCTKHKDRGTLTPYEGWHGRKPDLGHLHAFGCFCVVTKLEREQKASSKMAPRGDPGIFLGLDEIFPPKYVVLNGTTGKEIRSRSVVFNKNIFTGLARCDLWVAYRDLVDGIEAVTDTPGPAREPXXXXXXXXXTRPTQELRAPQRPLQQEKAASMLPNDPEEEEAEPGDQTGAMAFNPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDQAKEAAVEQFCGLVAAVEAGPEKITPQSFNQAIDGPDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFAWKGDG-----RAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFV--CPPGYVLHLQAPVEGLKQASAKWARKIDGIMTTQGFQPVAMGLETCLYYKVKDGIPCFVARYVDDTATGVHPSQHHIYDGLIKALEAEGLELHRLGNLISQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVK---AHKPVDVLMDPQLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPD-RDRKSTSVYVFFIGHTTLSWSSRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVITK 2388
            +LKQ G   + T    P+ N  AE A ++++ MAR +++ + +P+  W  AV  A ++ N         +TPYE W GRKP++ ++  FG   V   L++ +K   K   +G    F+G   +    Y + +    + +  R V+F++ +   +   D  +A+    DG                          T + R         +   ++P    + E E    T +     D  A+AE +  +E+++  ++ G+ RP Y      G   K+  V Q      AV++  EK  PQ++ +AI       W  AM  +          T+     G + +  +WV+  K D      R KAR+  KG  Q  GV+Y+E+FSP  +  ++RL L L V+  L +   DV  A+++SEL +D VY++ PEG+      G VL L   + GLKQA  +W   ++G +   GF       E CLY +   G  C +  YVDD           +    +K++ +   E    G L  Q  LG+Q++       + ++Q  YI   +++    +   A  P+D     Q+    E  +  + ++YQS IG L WL   + P +  +V +LAQ    P   H+     V+ Y     D ++L     G  L G+ DAD+  D  + +S + Y+FF+    +SW S KQ  V L ST AE  AL    KEALHLR+L   ++ +   +   PT ++ DNLS   LA+     + +KHIDI+  ++++ I   ++ L  + TE M+ADV+TK
Sbjct:   54 FLKQHGIARQLTIPYSPQQNGVAERANRTLVEMARSLLVHSNMPEFLWAEAVQSACYIRNRAPTSALVGMTPYEAWSGRKPNVKNMRTFGS--VAIGLDKTRKG--KFHAKGKEYRFVGYS-LVSKAYRLYDEERHQIVEKRDVLFDEQV--SVLEPDDQIAFDLPADGA-------------------------TNDYRL--------EVGKLIPC---KSEVEKEKVTCSEDMQSDEYASAEEQ-EAEQKQDVKV-GRGRPKYVRSGMPGRPKKKYNVIQ------AVQSA-EKQLPQTYKEAISSEHVSYWQAAMEAEYDALVANSTWTVTDLPKGEQAIGCKWVYTVKRDKTGSVERYKARLVAKGCAQRFGVNYTETFSPVCRYETIRLVLALSVQLKLYLHQMDVCTAYLNSEL-KDVVYMKQPEGYADRASSGKVLRLNKAIYGLKQAGREWNSMLNGALCEIGFSQCQN--EPCLYKQDIKGSLCLILIYVDDLLIACQKKSDLMQ---VKSMISTKFECVDKGPL--QMFLGMQIQRDGEIGDISMNQSLYISDMLQRHDMQQCRTATTPLDTGY--QIVCERESCVKVDTKEYQSAIGELMWLALTSRPDIYHSVVKLAQRNNNPHSEHFTGVKHVMRYLAATRD-LKLNYRASGQALEGFVDADWGGDISNSRSYTGYIFFLAGGPISWKSEKQSSVALSSTEAEYMALTSAAKEALHLRRL---IIEIGCGNADTPTTLYGDNLSSQNLAKNPIYHARSKHIDIRHHFVREAIQSGDVELKYIPTEEMIADVLTK 794          
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A034VRL5_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034VRL5_BACDO)

HSP 1 Score: 256 bits (655), Expect = 2.030e-70
Identity = 237/807 (29.37%), Postives = 367/807 (45.48%), Query Frame = 1
Query:    1 YLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHMYNCTKHKDRGTLTPYEGWHGRKPDLGHLHAFGCFCVVTKLEREQKASSKMAPRGDPGIFLGLDEIFPPKYVVLNGTTGKEIRSRSVVFNKNIFTGLARCDLWVAYRDLVDGIEAVTDTPGPAREPXXXXXXXXXTRPTQELRAPQRPLQQEKAASMLPNDPEEEEAEPGDQTGAMAFNPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDQAKEAAVEQFCGLVAAVEAGPEKI-TPQSFNQAIDGPDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFAWKG--DG---RAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCP--PGYVLHLQAPVEGLKQASAKWARKIDGIMTTQGFQPVAMGLETCLYYKVKDGIPCFVARYVDDTATGVHPSQHHIYDGLIKALEAEGLELHRLGNLISQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVLMDP--QLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDR-DRKSTSVYVFFIGHTTLSWSSRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVITK 2388
            YLK  G   + T    P+ N  AE   ++++ MARCM+LGA L    W  AV  +A++ N +  K   ++TPYE WHG KP + HL AFG F V   L++ Q+   K  P+G   + +G  +     Y + +    + I SR V F              +         EA+ D   P                + + +  Q P+ Q   A    ND   E+    D       + D   +AE +P      +   RG  RP        G   K+     F           + I  P +  +A+    S  W  AM  +     K     LVK   G + VR +WVFA K   DG   R KAR+  KG  Q  GV+Y+E+FSP ++  ++R+   +  EY L +   DV  A+++S+L ED +Y+  PE FV    P + L L+  + GLKQ+  +W  K+D I+   GF+      E C+Y   +      +A YVDD         H  +   IK + +  +E+   G +  Q  L ++V     T  + + Q+ +I   + ++ +++  +P+ + +DP  Q+   ++     +  QYQSLIG+L +L  CT P +  +V +LAQ    P   H +AA  +L Y     D M+L     G  +  +AD+D+  D  DRKS + Y   +     S+  +KQ  V L ST AE  AL    KEA++L+QL    LT ++ +     I++ DNLS + L +     + +KHIDIK  +I+       I L    T +M+AD+ TK
Sbjct:   26 YLKANGILRQLTVPYTPQQNGAAERLNRTLLEMARCMLLGAGLEQSLWGEAVSTSAYLRNRSPTKALDSVTPYEAWHGHKPTVAHLRAFGSFAVA--LDKRQR--DKFKPKGKEYVMVGYSDT-SKAYRLYDKEAKRLIISRDVYF--------------IEQTQHKQQHEAILDVLNPIHV-------------SDDEQMAQVPVIQVDEA----NDNANEDEVVDDGGMQPEKSDDDFESAEDEP------TPLKRGPGRPRLIRTGGCGRPKKQHNYLSFLTY--------DNIKVPDTVGEALSSELSGDWYNAMKVEYESLLKNKTWELVKLPRGQKPVRNKWVFAIKRNKDGNVERFKARLVAKGCSQIYGVNYTETFSPVVRYNTIRMIFAIAAEYRLHLHQMDVSTAYLNSDLSED-IYMNQPEMFVDKRYPDHCLKLKKALYGLKQSGRQWNMKLDSILKQIGFKQCEC--EPCVYVMHRGKQLNIIAVYVDDLLIASSDYSHLKH---IKDMISNKVEVVDKGQV--QHFLSMEVERDGETGAIAISQKGHIKRLLREY-QMENCRPIAIPLDPGHQVVCNDQNCKKADQVQYQSLIGSLMYLAVCTRPDILHSVCKLAQRNNDPHVEHLSAAKRILRYLCTTQD-MQLRYNKTGKPIECFADSDWGGDTGDRKSYTGYAVMLAGGVFSYECKKQTTVALSSTEAEYMALACVVKEAIYLKQL----LTEMELECPNAMIVNGDNLSAMNLVKNPVYHARSKHIDIKYHFIRNIYRGGEIELNYCSTSNMIADIFTK 768          
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Match: A0A0A9WQD4_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WQD4_LYGHE)

HSP 1 Score: 262 bits (669), Expect = 3.810e-70
Identity = 229/807 (28.38%), Postives = 364/807 (45.11%), Query Frame = 1
Query:   49 PRMNARAEAAGKSVMRMARCMILGARLPDRYWPFAVLYAAHMYNCTKHKDRGTLTPYEGWHGRKPDLGHLHAFGC--FCVVTKLEREQKASSKMAPRGDPGIFLGLDEIFPPKYVVLNGTTGKEIRSRSVVFNKNIFTGLARC-----DLWVAYRDLVD-GIEAVTDTPGPAREPXXXXXXXXXTRPTQELRAPQRPLQQEKAASMLPNDPEEEEAEPGDQTGAMAFNPDLIAAAEGKPRSEERRSARLRGKPRPNYSGKTTRGDQAKEAAVEQFCGLVAAVEAGPEKITPQSFNQAIDGPDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFAWKGDG-----RAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLDIFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLH-------LQAPVEGLKQASAKWARKIDGIMTTQGFQPVAMGLETCLYYKVKDGIPCFVARYVDDTATGVHPSQHHIYDGLIKALEAEGLELHRLGNLISQKLLGIQVRAKPGTNHLILDQRDYILATVEKFPEVKAHKPVDVLMDPQLDLFE-EGSLMQEPRQYQSLIGALTWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELEIGGGGLELRGYADADFAPDR-DRKSTSVYVFFIGHTTLSWSSRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFPPTI---IHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVITKPM 2394
            P+ N  +E   ++++  AR M+L A+LP +YW  AV  A  + N +       +TP+E W  RKPDL HL  FGC  + +V K +R     SK  P+    +F G  +     Y +++ +TG   +SR V+F++ +F G  +      DL   + D  + G+E      G + +P           PT +   P               D  +E+    D +      PD        P  E +   R                D    AA+        ++E+  +   P + ++A+  PDS+ W  A+ME+     +     LV       +++ +WVF  K DG     R KAR+  KG  Q  G+ Y E+FSP +++T+LR+ L L   +   +   D V AF+  +L  DE+Y+  PE  +   G V+        L+  V GLKQAS  W +K D +MT  G        + C++Y+        +A YVDD    +  +   +   +   L A+ LE+  LG   +   LG+ +   P T  + +DQ+ YI + +++F  +   KP    M+  L L + EGS   +   Y++ +G+L +   CT P L+ AV  L++F   P   HW+    VL Y     D  +L        L GYAD+D+A D  DR S + YVF +    +SWSS+KQ  V   +T AE  ++    +EAL LR      + L +     P +   I  DN   V L +     S TKHID+   +I++ +    + +    TE M+AD++TK +
Sbjct:  556 PQQNGVSERVNRTLVEKARSMMLDAKLPAKYWAEAVNAACFLKNVSPTIAVNNMTPFEAWSNRKPDLSHLKVFGCTAYALVPKSKR-----SKWDPKSKEYVFTGYCDD-SKGYRLIDPSTGCVTKSRDVIFDETLFKGDTKAKSNEPDLTQFFEDFSEMGLEDF----GVSGQPVLP--------PTPQTTEPDXXXXXXXXEWHPAEDSFQEDLFSSDDSSDFHGFPDADLTERQLPERERKLPKRFE--------------DYVMSAAL--------SIESSED---PTTLDEALSQPDSENWKMAIMEEYDSLLRNKSWELVDHPKDHNVIKCKWVFRKKHDGNSDKVRYKARLVVKGCSQIYGIDYDETFSPVVRITTLRILLALAASHSWMVEQMDAVTAFLQPDL-HDEIYMYHPE--IIKDGKVIREFDRVCRLKKSVYGLKQASRLWYQKFDTVMTELGLTKAQF--DPCVFYRFDGDCIFILALYVDDAM--IFTNNDDLKTKIKGDLMAK-LEMKDLGP--ASYCLGMHIERDPITGTICVDQKRYIESVLKRF-HMSDCKPQGTPMEHGLKLMKNEGSECADV-PYRTAVGSLMYAANCTRPDLSFAVGALSRFNANPNMTHWSYVKRVLRYLQGTCDG-KLVFKKTEDPLHGYADSDYADDPIDRISVTGYVFLLSSGAISWSSKKQPTVARSTTEAEYMSISNATQEALWLR------MVLTELGELKPDMKIDIKCDNKGAVDLTKNSTHHSRTKHIDVHHHFIREAVKNGQVSITKESTEFMVADLLTKAL 1300          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1126.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DBW5_HETAK4.670e-9787.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3UVC1_HETAK8.970e-9785.63Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A146LH62_LYGHE1.680e-7430.79Retrovirus-related Pol polyprotein from transposon... [more]
A0A8K1FHK1_PYTOL2.550e-7329.57Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]
A0A1W7R6G9_AEDAL3.620e-7329.14Putative pol polyprotein (Fragment) n=1 Tax=Aedes ... [more]
A0A8H8JF23_9AGAM8.810e-7330.04Copia-like polyprotein/retrotransposon n=1 Tax=Cer... [more]
A0A182GFZ6_AEDAL1.690e-7128.13Integrase catalytic domain-containing protein n=2 ... [more]
A0A811UW43_CERCA8.630e-7128.00(Mediterranean fruit fly) hypothetical protein n=1... [more]
A0A034VRL5_BACDO2.030e-7029.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A0A9WQD4_LYGHE3.810e-7028.38Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1126contigH-akashiwo_Contig1126:143267..145876 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog161934.XP_010676254.1
PFAMsRVT_2
Model size2394
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.44e-74
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3894V@33090|Viridiplantae,3GY0Z@35493|Streptophyta
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size2394
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387090.6583745-CDS-H-akashiwo_Contig1126:143266..1451281681387090.6583745-CDS-H-akashiwo_Contig1126:143266..145128Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1126 143267..145128 -
1681387090.6690128-CDS-H-akashiwo_Contig1126:145344..1458761681387090.6690128-CDS-H-akashiwo_Contig1126:145344..145876Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1126 145345..145876 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1126.4.1prot_H-akashiwo_Contig1126.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1126 143267..145876 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1126.4.1

>prot_H-akashiwo_Contig1126.4.1 ID=prot_H-akashiwo_Contig1126.4.1|Name=mRNA_H-akashiwo_Contig1126.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=798bp
YLKQEGTHPEPTDVGEPRMNARAEAAGKSVMRMARCMILGARLPDRYWPF
AVLYAAHMYNCTKHKDRGTLTPYEGWHGRKPDLGHLHAFGCFCVVTKLER
EQKASSKMAPRGDPGIFLGLDEIFPPKYVVLNGTTGKEIRSRSVVFNKNI
FTGLARCDLWVAYRDLVDGIEAVTDTPGPAREPGPAPGPGPGTRPTQELR
APQRPLQQEKAASMLPNDPEEEEAEPGDQTGAMAFNPDLIAAAEGKPRSE
ERRSARLRGKPRPNYSGKTTRGDQAKEAAVEQFCGLVAAVEAGPEKITPQ
SFNQAIDGPDSDVWAKAMMEQMTKWQKRGIGTLVKREPGMEIVRTRWVFA
WKGDGRAKARIAPKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYGLD
IFMDDVVAAFISSELGEDEVYLEVPEGFVCPPGYVLHLQAPVEGLKQASA
KWARKIDGIMTTQGFQPVAMGLETCLYYKVKDGIPCFVARYVDDTATGVH
PSQHHIYDGLIKALEAEGLELHRLGNLISQKLLGIQVRAKPGTNHLILDQ
RDYILATVEKFPEVKAHKPVDVLMDPQLDLFEEGSLMQEPRQYQSLIGAL
TWLTCCTAPTLTTAVNRLAQFLVAPTEMHWAAALAVLAYAHQHLDEMELE
IGGGGLELRGYADADFAPDRDRKSTSVYVFFIGHTTLSWSSRKQKGVVLH
STHAELNALLEGGKEALHLRQLCGFLLTLLQRDGFPPTIIHQDNLSCVGL
AEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVITKPM
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mRNA from alignment at H-akashiwo_Contig1126:143267..145876-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1126.4.1 ID=mRNA_H-akashiwo_Contig1126.4.1|Name=mRNA_H-akashiwo_Contig1126.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2610bp|location=Sequence derived from alignment at H-akashiwo_Contig1126:143267..145876- (Heterosigma akashiwo CCMP452)
TATCTGAAACAGGAGGGGACTCACCCAGAGCCTACGGATGTAGGAGAGCC GCGGATGAATGCGAGGGCAGAGGCTGCTGGCAAGTCGGTGATGAGGATGG CGCGCTGCATGATCTTGGGTGCTAGGCTGCCAGACAGATACTGGCCTTTT GCAGTGCTGTACGCGGCTCACATGTACAACTGCACAAAACACAAGGATCG TGGCACTCTGACACCGTATGAGGGCTGGCATGGGCGGAAGCCGGACCTCG GGCATCTGCATGCCTTCGGGTGCTTCTGTGTGGTGACAAAGCTGGAGCGA GAACAAAAAGCTAGCAGTAAAATGGCGCCGCGCGGGGACCCTGGCATTTT TCTGGGGCTTGACGAGATTTTCCCGCCTAAGTATGTGGTTCTGAACGGGA CCACAGGCAAGGAAATCAGATCCCGGTCAGTGGTCTTCAACAAGAACATC TTCACTGGCCTGGCTCGTTGTGATCTTTGGGTGGCCTACAGGGACTTGGT GGATGGCATTGAGGCTGTGACTGATACACCGGGTCGCATGCCGAGGCCTC AGCGGAGGAGCCAGCAGAAGAAGCACGTCAGCTTTGCGGGGCCGGAAGCT GAGGAGCCAGGTGCGAGGCCGGCAGCTGGGGGACCGGGAGCCCGGGCGGG GCCTGCGCCGGCAGCTGGGGAGCCAGGAGCCCGGCCTGCGCCGAGGGCGG GGTCTGCGCCGGGGCAGGGACCTGGGGCCGGGCCTGCGTCGGAGCCAGGG CCTGCACGGGAGCCGGGACCTGCGCCGGGGCCGGGACCTGGGACCAGGCC GACACAGGAGCTGAGGGCGCCACAGAGACCGCTTCAGCAGGAGAAGGCCG CCTCCATGCTTCCGAATGATCCGGAGGAGGAGGAGGCTGAGCCGGGTGAC CAGACGGGAGCAATGGCTTTCAATCCCGACCTAATTGCAGCAGCGGAGGG CAAGCCACGGTCTGAGGAGAGAAGGTCTGCAAGGTTACGCGGGAAGCCGC GACCAAACTACTCGGGCAAGACCACACGCGGGGACCAAGCCAAGGAGGCG GCGGTGGAGCAGTTCTGCGGCCTGGTGGCGGCCGTGGAGGCGGGACCAGA GAAGATCACCCCGCAGTCCTTCAATCAGGCTATAGATGGGCCCGACAGTG ATGTGTGGGCCAAGGCCATGATGGAACAGATGACCAAGTGGCAGAAGCGC GGGATTGGCACCCTGGTGAAGCGTGAGCCTGGTATGGAGATAGTCCGCAC CCGGTGGGTCTTTGCCTGGAAAGGTGATGGGAGGGCTAAGGCGAGGATAG CACCCAAAGGCTTCGATCAGACACTTGGGGTATCTTACAGTGAGTCATTT AGTCCGACGCTTAAGATGACTAGTCTGCGTCTTTTTCTACACCTGTGTGT AGAGTATGGCCTCGACATCTTCATGGATGATGTCGTGGCGGCTTTCATCA GCTCGGAGCTGGGTGAAGACGAGGTTTACCTGGAAGTGCCAGAGGGCTTT GTCTGCCCTCCAGGATATGTTCTTCATCTACAGGCACCGGTGGAGGGCCT GAAGCAGGCCTCAGCCAAATGGGCGCGGAAGATCGACGGCATCATGACCA CACAAGGTTTTCAGCCGGTGGCGATGGGACTCGAAACCTGCCTCTACTAC AAGGTGAAGGACGGGATCCCGTGTTTTGTGGCGCGCTATGTGGACGACAC GGCGACAGGTGTGCACCCCTCCCAGCACCACATCTATGATGGCCTCATCA AGGCGCTGGAGGCTGAGGGTCTGGAGCTACACAGACTAGGGAACCTCATC AGCCAGAAATTGCTGGGCATTCAAGTGCGAGCTAAGCCAGGGACCAACCA CCTGATTCTGGATCAACGGGACTATATTCTGGCGACTGTGGAGAAGTTTC CAGAGGTCAAGGCCCACAAGCCAGTGGATGTGCTGATGGACCCACAACTG GATCTCTTCGAGGAGGGCAGCCTAATGCAGGAGCCGCGCCAATACCAGTC GCTGATCGGCGCACTCACTTGGCTGACGTGCTGTACTGCGCCCACGCTTA CAACAGCGGTGAACAGGCTGGCGCAGTTTCTGGTTGCTCCAACGGAAATG CACTGGGCAGCAGCGCTTGCGGTCTTGGCCTATGCGCACCAGCACCTGGA CGAGATGGAGCTGGAGATCGGCGGCGGGGGCCTGGAGCTGAGGGGCTACG CGGATGCTGACTTCGCGCCGGACAGGGACCGCAAGTCTACCTCAGTGTAT GTCTTCTTTATTGGGCACACTACTCTGTCATGGTCCTCAAGGAAACAAAA GGGGGTTGTGCTTCACAGCACGCACGCGGAGCTTAATGCCTTGCTGGAGG GTGGTAAAGAGGCGCTTCATCTGCGGCAGTTGTGTGGGTTCTTGCTGACC CTGCTGCAGCGCGACGGTTTCCCGCCTACCATCATCCACCAGGATAATCT CAGCTGTGTGGGACTTGCTGAGAAGGGGCGGCTTTCCTCGTTGACCAAGC ACATTGACATCAAAGACCTGTGGATAAAACAGGAAATTGATGAGATGAAT ATTGTGCTGGTGCCGGTGAGGACGGAGCACATGCTAGCAGATGTTATCAC CAAGCCGATG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1126:143267..145876-

>mRNA_H-akashiwo_Contig1126.4.1 ID=mRNA_H-akashiwo_Contig1126.4.1|Name=mRNA_H-akashiwo_Contig1126.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=2394bp|location=Sequence derived from alignment at H-akashiwo_Contig1126:143267..145876- (Heterosigma akashiwo CCMP452)
TATCTGAAACAGGAGGGGACTCACCCAGAGCCTACGGATGTAGGAGAGCC
GCGGATGAATGCGAGGGCAGAGGCTGCTGGCAAGTCGGTGATGAGGATGG
CGCGCTGCATGATCTTGGGTGCTAGGCTGCCAGACAGATACTGGCCTTTT
GCAGTGCTGTACGCGGCTCACATGTACAACTGCACAAAACACAAGGATCG
TGGCACTCTGACACCGTATGAGGGCTGGCATGGGCGGAAGCCGGACCTCG
GGCATCTGCATGCCTTCGGGTGCTTCTGTGTGGTGACAAAGCTGGAGCGA
GAACAAAAAGCTAGCAGTAAAATGGCGCCGCGCGGGGACCCTGGCATTTT
TCTGGGGCTTGACGAGATTTTCCCGCCTAAGTATGTGGTTCTGAACGGGA
CCACAGGCAAGGAAATCAGATCCCGGTCAGTGGTCTTCAACAAGAACATC
TTCACTGGCCTGGCTCGTTGTGATCTTTGGGTGGCCTACAGGGACTTGGT
GGATGGCATTGAGGCTGTGACTGATACACCGGGGCCTGCACGGGAGCCGG
GACCTGCGCCGGGGCCGGGACCTGGGACCAGGCCGACACAGGAGCTGAGG
GCGCCACAGAGACCGCTTCAGCAGGAGAAGGCCGCCTCCATGCTTCCGAA
TGATCCGGAGGAGGAGGAGGCTGAGCCGGGTGACCAGACGGGAGCAATGG
CTTTCAATCCCGACCTAATTGCAGCAGCGGAGGGCAAGCCACGGTCTGAG
GAGAGAAGGTCTGCAAGGTTACGCGGGAAGCCGCGACCAAACTACTCGGG
CAAGACCACACGCGGGGACCAAGCCAAGGAGGCGGCGGTGGAGCAGTTCT
GCGGCCTGGTGGCGGCCGTGGAGGCGGGACCAGAGAAGATCACCCCGCAG
TCCTTCAATCAGGCTATAGATGGGCCCGACAGTGATGTGTGGGCCAAGGC
CATGATGGAACAGATGACCAAGTGGCAGAAGCGCGGGATTGGCACCCTGG
TGAAGCGTGAGCCTGGTATGGAGATAGTCCGCACCCGGTGGGTCTTTGCC
TGGAAAGGTGATGGGAGGGCTAAGGCGAGGATAGCACCCAAAGGCTTCGA
TCAGACACTTGGGGTATCTTACAGTGAGTCATTTAGTCCGACGCTTAAGA
TGACTAGTCTGCGTCTTTTTCTACACCTGTGTGTAGAGTATGGCCTCGAC
ATCTTCATGGATGATGTCGTGGCGGCTTTCATCAGCTCGGAGCTGGGTGA
AGACGAGGTTTACCTGGAAGTGCCAGAGGGCTTTGTCTGCCCTCCAGGAT
ATGTTCTTCATCTACAGGCACCGGTGGAGGGCCTGAAGCAGGCCTCAGCC
AAATGGGCGCGGAAGATCGACGGCATCATGACCACACAAGGTTTTCAGCC
GGTGGCGATGGGACTCGAAACCTGCCTCTACTACAAGGTGAAGGACGGGA
TCCCGTGTTTTGTGGCGCGCTATGTGGACGACACGGCGACAGGTGTGCAC
CCCTCCCAGCACCACATCTATGATGGCCTCATCAAGGCGCTGGAGGCTGA
GGGTCTGGAGCTACACAGACTAGGGAACCTCATCAGCCAGAAATTGCTGG
GCATTCAAGTGCGAGCTAAGCCAGGGACCAACCACCTGATTCTGGATCAA
CGGGACTATATTCTGGCGACTGTGGAGAAGTTTCCAGAGGTCAAGGCCCA
CAAGCCAGTGGATGTGCTGATGGACCCACAACTGGATCTCTTCGAGGAGG
GCAGCCTAATGCAGGAGCCGCGCCAATACCAGTCGCTGATCGGCGCACTC
ACTTGGCTGACGTGCTGTACTGCGCCCACGCTTACAACAGCGGTGAACAG
GCTGGCGCAGTTTCTGGTTGCTCCAACGGAAATGCACTGGGCAGCAGCGC
TTGCGGTCTTGGCCTATGCGCACCAGCACCTGGACGAGATGGAGCTGGAG
ATCGGCGGCGGGGGCCTGGAGCTGAGGGGCTACGCGGATGCTGACTTCGC
GCCGGACAGGGACCGCAAGTCTACCTCAGTGTATGTCTTCTTTATTGGGC
ACACTACTCTGTCATGGTCCTCAAGGAAACAAAAGGGGGTTGTGCTTCAC
AGCACGCACGCGGAGCTTAATGCCTTGCTGGAGGGTGGTAAAGAGGCGCT
TCATCTGCGGCAGTTGTGTGGGTTCTTGCTGACCCTGCTGCAGCGCGACG
GTTTCCCGCCTACCATCATCCACCAGGATAATCTCAGCTGTGTGGGACTT
GCTGAGAAGGGGCGGCTTTCCTCGTTGACCAAGCACATTGACATCAAAGA
CCTGTGGATAAAACAGGAAATTGATGAGATGAATATTGTGCTGGTGCCGG
TGAGGACGGAGCACATGCTAGCAGATGTTATCACCAAGCCGATG
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