mRNA_H-akashiwo_Contig1126.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: A0A7S2UT75_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT75_9STRA) HSP 1 Score: 205 bits (521), Expect = 2.410e-62 Identity = 93/185 (50.27%), Postives = 131/185 (70.81%), Query Frame = 1
Query: 1 VKVIYSPQFLDHKAPTFHVECPERLIEIEAKLKGLQGGITWAAPSGESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEIR 555
V++IYS +FL+HK T+H ECP+RL KLK +QG I W P+ ER + LE K++H +Y+ E++ +S +GGG LD+DT+V+ +++ VA+LAA AW DAVDS +K+ PAF+L+RPPGHHA + GMGFC+ NFA IAA+YA E + R+A+ DWDVHHGNGV+ L+K+ +R
Sbjct: 32 VRIIYSDKFLEHKDTTYHPECPDRLKWTVPKLKSIQG-IDWRTPTSSYSKEREQLALEYIKKVHDPDYVEEIQKLSGQGGGRLDYDTYVNAETYEVAVLAACAWLDAVDSAVKEGTPAFALTRPPGHHALRGTGMGFCIFNFAAIAARYACEHH--SLARIALLDWDVHHGNGVQYLLKEDERMR 213
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: UPI0004761EF0 (histone deacetylase n=1 Tax=Geminocystis herdmanii TaxID=669359 RepID=UPI0004761EF0) HSP 1 Score: 186 bits (472), Expect = 2.710e-55 Identity = 97/189 (51.32%), Postives = 124/189 (65.61%), Query Frame = 1
Query: 1 VKVIYSPQFLDHKAPTFHVECPERLIEIEAKL-KGL-QGGITWAAPSG---ESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEI 552
+KV++SP+FLDHK FH ECP+RL I+ +L G+ Q I W PS ++ + S + ++IH YI ++ +I+ RGGG LD DT V +S+ VALLA +AW D V+ VLKDSEP F L+RPPGHHAT TVGMGFCL + A IAA YAL K+VAI DWDVHHGNG E ++ P I
Sbjct: 2 LKVVFSPRFLDHKTGHFHPECPQRLTAIQQRLITGVCQDKIQWLEPSSIARQTFTIEQSQAMYWVQKIHDSNYIEKVRTIAHRGGGKLDEDTPVSAQSYDVALLAVSAWLDGVNEVLKDSEPCFILARPPGHHATSTVGMGFCLFSNAAIAANYALSQ---GFKKVAILDWDVHHGNGTEEIIAHNPNI 187
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: A0A6P1ZPY5_9CYAN (Histone deacetylase n=1 Tax=Nodularia sp. (in: Bacteria) TaxID=2047085 RepID=A0A6P1ZPY5_9CYAN) HSP 1 Score: 181 bits (459), Expect = 2.190e-53 Identity = 98/186 (52.69%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 VKVIYSPQFLDHKAPTFHVECPERLIEIEAKLKG--LQGGITWAAPSGESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEI 552
+ VIYS +FLDHK +H ECPERL I LK ITW +P+ + SER S++ + K H YIN+++ I+ GGG LD DT + P+S+ VALLA +AW D VD+VL + PAF L+RPPGHHA GMGFCL + A IAA YALE PG KRVAI DWDVHHGNG + +V+ P+I
Sbjct: 2 LSVIYSHEFLDHKTGRYHPECPERLTVIVNALKSAVFAEKITWRSPT--ATSERRSLMSTLLK-AHDPAYINKVKEIATTGGGYLDSDTSISPRSYDVALLAVSAWLDGVDTVLTTANPAFVLARPPGHHAESHAGMGFCLFSNAAIAALYALEQ-PG-VKRVAILDWDVHHGNGTQAIVETHPQI 182
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: UPI0020228A97 (histone deacetylase n=1 Tax=Chroococcidiopsis sp. CCMEE 29 TaxID=155894 RepID=UPI0020228A97) HSP 1 Score: 179 bits (454), Expect = 1.200e-52 Identity = 93/184 (50.54%), Postives = 120/184 (65.22%), Query Frame = 1
Query: 7 VIYSPQFLDHKAPTFHVECPERLIEIEAKLKGLQ--GGITWAAPSGESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEI 552
+IYS +FLDHK H E PERL I LK + W +P+ + + I+ V +R+H+ +YI +++++Q+GGG LD DT V P+S+ VALLA +AW D VD VL S PAF L+RPPGHHA GMGFCL + A IAA YALE PG RVAI DWDVHHGNG + LV++ P+I
Sbjct: 4 IIYSDEFLDHKTGRLHPEKPERLSAITTALKAASFANQLEWRSPTPVAETRAIAFV----ERVHSHKYIKTVQTLAQQGGGYLDLDTVVSPRSYDVALLAVSAWLDGVDQVLAISNPAFVLTRPPGHHAESDCGMGFCLFSNAAIAAYYALEK-PG-INRVAILDWDVHHGNGTQALVENHPQI 181
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: A0A6P0JUY3_9CYAN (Histone deacetylase n=1 Tax=Kamptonema sp. SIO4C4 TaxID=2607773 RepID=A0A6P0JUY3_9CYAN) HSP 1 Score: 177 bits (448), Expect = 9.860e-52 Identity = 90/184 (48.91%), Postives = 118/184 (64.13%), Query Frame = 1
Query: 7 VIYSPQFLDHKAPTFHVECPERLIEIEAKLKGLQGG--ITWAAPSGESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEI 552
+IYS +FLDHK +H ECPERL I LK + I W P+ E VL +++H+ +Y+ + ++++RGGG LD DT++ P+S+ VALLA +AW D VD VL PAF L+RPPGHHA T GMGFCL + IAA YALE +RVAI DWDVHHGNG ++LV++ P I
Sbjct: 4 IIYSDRFLDHKPRHYHPECPERLTAIVNALKSVSWSDRIDWQTPTPVEQRE----VLPWLEKLHSPKYLTLVRTMAERGGGMLDTDTYIAPESYDVALLAVSAWFDGVDRVLSSHNPAFVLARPPGHHAEATTGMGFCLFSNVAIAAHYALEK--PNVQRVAIVDWDVHHGNGTQHLVENNPNI 181
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: UPI0019DCE10C (Histone deacetylase n=1 Tax=Nostocales cyanobacterium LEGE 11386 TaxID=1828825 RepID=UPI0019DCE10C) HSP 1 Score: 176 bits (445), Expect = 2.780e-51 Identity = 94/184 (51.09%), Postives = 118/184 (64.13%), Query Frame = 1
Query: 7 VIYSPQFLDHKAPTFHVECPERLIEIEAKLKGLQGG--ITWAAPSGESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEI 552
VIY+ +FLDHK +H E PERL I LK I W +P+ + S+++ M + HT YIN+++ I+ GGG LD DT V P+S+ VALLA +AW D VD+VL + PAF LSRPPGHHA GMGFCL + A IAA YALE PG RVAI DWDVHHGNG + +V+ P+I
Sbjct: 4 VIYADEFLDHKTGRYHPEKPERLTAIVNTLKAATFAEKIVWRSPTPAAEK---SLLMPMLLKAHTPAYINKVKEIASTGGGYLDGDTPVSPRSYDVALLAVSAWLDGVDNVLATANPAFVLSRPPGHHAESDAGMGFCLFSHAAIAAFYALEQ-PG-INRVAILDWDVHHGNGTQAIVETHPQI 182
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: UPI0019FBC387 (Histone deacetylase n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019FBC387) HSP 1 Score: 175 bits (443), Expect = 5.270e-51 Identity = 94/184 (51.09%), Postives = 119/184 (64.67%), Query Frame = 1
Query: 7 VIYSPQFLDHKAPTFHVECPERLIEIEAKLKGLQGG--ITWAAPSGESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEI 552
VIYS +FL H H E P+RL I LK + I W P+ + + VL ++IHT+EYIN L I++ GGG LD+DT V P+S+ +ALLA +AW D VD V++ PAF L+RPPGHHAT+ GMGFCL + A IAA YAL PG +RVAI DWDVHHGNG E +V+D P+I
Sbjct: 4 VIYSEEFLLHDTGRSHPEKPQRLQAIVEALKKISWSEQIDWQLPTPVPNRD----VLPWIEQIHTQEYINRLRHIAETGGGMLDWDTPVSPRSYEIALLAVSAWLDGVDKVMETDNPAFVLARPPGHHATRDTGMGFCLFSNAAIAAHYALTK-PG-IERVAILDWDVHHGNGTEAIVEDNPQI 181
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: A0A073CYS4_PLAAG (Histone deacetylase 1 n=14 Tax=Oscillatoriales TaxID=1150 RepID=A0A073CYS4_PLAAG) HSP 1 Score: 175 bits (443), Expect = 5.560e-51 Identity = 93/184 (50.54%), Postives = 123/184 (66.85%), Query Frame = 1
Query: 7 VIYSPQFLDHKAPTFHVECPERLIEIEAKLKGL--QGGITWAAPSGESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEI 552
VIYS +FL+HK FH E PERL I LK L + + W P+ ++R+ ++++ +++HT YI ++++IS RGGG LD DT + +S+ VALLA +AW D VD VL + PAF L+RPPGHHA K GMGFCL + A IAA YAL+ PG +VAI DWDVHHGNG + LV+D P I
Sbjct: 4 VIYSDEFLNHKTGLFHPERPERLTAIVNALKSLSWREQLRWQKPT--PVADRLDSLIKLLEKVHTPTYIQQVKAISDRGGGYLDGDTPMSAESYDVALLAVSAWLDGVDRVLDNGRPAFVLARPPGHHAEKDRGMGFCLFSNAGIAAYYALKK-PG-INKVAILDWDVHHGNGTQGLVEDNPRI 183
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: B7K4E2_RIPO1 (Histone deacetylase superfamily n=1 Tax=Rippkaea orientalis (strain PCC 8801) TaxID=41431 RepID=B7K4E2_RIPO1) HSP 1 Score: 175 bits (443), Expect = 6.530e-51 Identity = 92/184 (50.00%), Postives = 116/184 (63.04%), Query Frame = 1
Query: 7 VIYSPQFLDHKAPTFHVECPERLIEIEAKLKGLQ--GGITWAAPSGESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEI 552
+IYS FL+HK FH ECPERL I LK + ++W +P+ + + I V +IHT YI +E I+ GGG LD DT V P+S+ +ALLA +AW D VD VL + PAF+L RPPGHHA K GMGFCL + A IAA Y+LE + KRVAI DWDVHHGNG E +V++ I
Sbjct: 8 IIYSDDFLNHKTGAFHPECPERLTAIVKGLKEVAWCDRLSWISPTPITQRDVIPYV----NKIHTTAYIQRVEQIATSGGGMLDMDTPVSPQSYDIALLAVSAWLDGVDQVLNNHHPAFALVRPPGHHAIKETGMGFCLFSNAAIAAYYSLEH--SQVKRVAILDWDVHHGNGTEAIVENNANI 185
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Match: A0A1B7WUJ3_9NOST (Hist_deacetyl domain-containing protein n=8 Tax=Nostocales TaxID=1161 RepID=A0A1B7WUJ3_9NOST) HSP 1 Score: 174 bits (442), Expect = 7.860e-51 Identity = 95/186 (51.08%), Postives = 120/186 (64.52%), Query Frame = 1
Query: 1 VKVIYSPQFLDHKAPTFHVECPERLIEIEAKLK--GLQGGITWAAPSGESHSERISMVLEMAKRIHTEEYINELESISQRGGGGLDFDTFVHPKSFRVALLAATAWCDAVDSVLKDSEPAFSLSRPPGHHATKTVGMGFCLMNFAVIAAKYALEAYPGKCKRVAIFDWDVHHGNGVENLVKDFPEI 552
++VIYS +FLDHK +H E P RL I LK ITW P+ + +E +H+ YIN++++I+ GGG LD DT V P+S+ VALLA +AW DAVD+VL ++PAF L+RPPGHHA GMGFCL + A IAA YAL+ PG KRVAI DWDVHHGNG E +V+ PEI
Sbjct: 2 LQVIYSEEFLDHKTGIYHPEKPARLTAIVDALKTASFAEKITWKLPTPVISKPSLMSWIES---VHSTTYINKVKNIAANGGGYLDRDTPVSPRSYDVALLAVSAWLDAVDTVLHTADPAFVLARPPGHHAVSDTGMGFCLFSNAAIAAFYALQQ-PG-IKRVAILDWDVHHGNGTEAIVETHPEI 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1126.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1126.2.1 >prot_H-akashiwo_Contig1126.2.1 ID=prot_H-akashiwo_Contig1126.2.1|Name=mRNA_H-akashiwo_Contig1126.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=186bp VKVIYSPQFLDHKAPTFHVECPERLIEIEAKLKGLQGGITWAAPSGESHSback to top mRNA from alignment at H-akashiwo_Contig1126:104832..105554+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1126.2.1 ID=mRNA_H-akashiwo_Contig1126.2.1|Name=mRNA_H-akashiwo_Contig1126.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=723bp|location=Sequence derived from alignment at H-akashiwo_Contig1126:104832..105554+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1126:104832..105554+ >mRNA_H-akashiwo_Contig1126.2.1 ID=mRNA_H-akashiwo_Contig1126.2.1|Name=mRNA_H-akashiwo_Contig1126.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=558bp|location=Sequence derived from alignment at H-akashiwo_Contig1126:104832..105554+ (Heterosigma akashiwo CCMP452)back to top |