mRNA_H-akashiwo_Contig1124.6.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A7S4DEE9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEE9_HETAK) HSP 1 Score: 216 bits (549), Expect = 9.270e-65 Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 1
Query: 1 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTRG 339
DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVT+G
Sbjct: 284 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKG 396
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A7S3Y8R3_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8R3_HETAK) HSP 1 Score: 216 bits (549), Expect = 9.660e-64 Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 1
Query: 1 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTRG 339
DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVT+G
Sbjct: 284 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKG 396
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A0A9XTP4_LYGHE (Peptide chain release factor 2 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XTP4_LYGHE) HSP 1 Score: 125 bits (315), Expect = 2.420e-32 Identity = 58/108 (53.70%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 10 LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVT 333
LP +++ ++ + I +VAH++KGSAG SGTDS W+ +LL +G S RLR+A+A+L +MSN ++EW + ALL RRG+ LDK PG+RPIG+GEVLQRI AK + +VT
Sbjct: 254 LPTMKDIDVSGDHIAKVAHSLKGSAGPSGTDSETWRDMLLRFGAHSSRLRDAIAALVRRMSNGIMEWDKIKALLARRGVALDKNPGVRPIGVGEVLQRICAKTMVYVT 361
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A6H5FX45_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FX45_9HEMI) HSP 1 Score: 124 bits (311), Expect = 8.320e-32 Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 1 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVT 333
D+ LPV +V I+ I + AH +KGSAG SGTD W+++LL YGN S RLREAVASL ++N V+EW + A+L RRG+ LDK PG+RPIG+GEVLQRI AK +A VT
Sbjct: 250 DENLPVLVDVNISETHISKAAHRLKGSAGPSGTDGDQWRNMLLRYGNHSLRLREAVASLTRFLANSVVEWDQIKAILARRGVALDKCPGVRPIGVGEVLQRICAKTMAMVT 360
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A0A9XG89_LYGHE (Mediator of RNA polymerase II transcription subunit 13 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XG89_LYGHE) HSP 1 Score: 122 bits (305), Expect = 8.540e-32 Identity = 59/108 (54.63%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 10 LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVT 333
LP+ ++ +T+ IE++A ++GSAG SGTD+ WK++LL YG S +LREAVASL +++N V+EWS + ALL RRG+ LDK PG+RPIG+GE+LQRI AK +A +T
Sbjct: 22 LPLMVDIDVTSNHIEKIARRLRGSAGPSGTDAEQWKNMLLRYGAHSAQLREAVASLVRRLANGVIEWSRIKALLARRGVALDKCPGVRPIGVGELLQRICAKTMALIT 129
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A6H5GR62_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GR62_9HEMI) HSP 1 Score: 126 bits (317), Expect = 1.720e-31 Identity = 66/108 (61.11%), Postives = 84/108 (77.78%), Query Frame = 1
Query: 10 LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVT 333
LP++ +V I+A IER AH + GSAG SGTD+ WK+LLL YGN S RLREAVASLA ++N V++WS + ALL RRG+ LDK+PG+RPIG+GEVL RI AK +A +T
Sbjct: 98 LPLQVDVNISANHIERSAHRLGGSAGPSGTDAEQWKNLLLRYGNHSVRLREAVASLARLLANGVVDWSRIKALLARRGVALDKQPGVRPIGVGEVLHRICAKTMATLT 205
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A8D8V8S3_9HEMI (Hypothetical protein n=5 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8V8S3_9HEMI) HSP 1 Score: 126 bits (316), Expect = 2.370e-31 Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 1
Query: 10 LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVT 333
LP+ V ITA+ IE+VA + G AG SGTDS WKS L+ YGN S RLR+++ASL +++NE++ W + ALL RRGI LDK PG+RPIGIGEVLQR++AKA+A T
Sbjct: 296 LPIMIHVDITAQHIEKVARQISGGAGPSGTDSDQWKSFLIRYGNHSTRLRDSIASLTRRIANEIVNWDSIRALLARRGIALDKCPGVRPIGIGEVLQRVMAKAMATAT 403
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A7S3Y2Y7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2Y7_HETAK) HSP 1 Score: 118 bits (295), Expect = 2.400e-31 Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 1
Query: 133 YGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTRG 339
+G AS RL EAVA LATKMSNEV+EWSD+SALL RRG+MLDKKPGLRPIG+GEVLQRILAK VAWVT+G
Sbjct: 1 HGKASERLEEAVADLATKMSNEVMEWSDISALLARRGLMLDKKPGLRPIGVGEVLQRILAKLVAWVTKG 69
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A0A9YI10_LYGHE (Methionyl-tRNA formyltransferase (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YI10_LYGHE) HSP 1 Score: 116 bits (290), Expect = 3.510e-31 Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = 1
Query: 4 QPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVT 333
+ LP +V +T I AH +KGSAG SGTD+ W+ +LL YG S RLREAVA+L ++N +++W + ALL RRG+ LDK+PG+RPIGIGEVLQRI AK +A +T
Sbjct: 9 EELPTLLDVDVTESHIAVSAHRLKGSAGPSGTDAEQWRGMLLRYGAHSSRLREAVAALTRSLANGIVDWDRIRALLARRGVALDKRPGVRPIGIGEVLQRICAKTMAMLT 118
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Match: A0A0A9Z6I3_LYGHE (Methionyl-tRNA formyltransferase (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z6I3_LYGHE) HSP 1 Score: 117 bits (293), Expect = 3.550e-31 Identity = 57/111 (51.35%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 1 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVT 333
D+ LP+ +V I+A IE+ AH +KGSAG SGTD+ W+S+LL +G S RLREAVASL ++N +++W + ALL RRG+ ++K PG+RP+G+GEVL R+ AK +A +T
Sbjct: 15 DETLPLMLDVQISANHIEKSAHGLKGSAGPSGTDADQWRSMLLRFGTHSERLREAVASLTRYLANGIVDWDKIRALLARRGVAINKHPGVRPLGVGEVLLRLCAKTIATLT 125 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1124.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1124.6.1 >prot_H-akashiwo_Contig1124.6.1 ID=prot_H-akashiwo_Contig1124.6.1|Name=mRNA_H-akashiwo_Contig1124.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=115bp DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGback to top mRNA from alignment at H-akashiwo_Contig1124:251675..252019+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1124.6.1 ID=mRNA_H-akashiwo_Contig1124.6.1|Name=mRNA_H-akashiwo_Contig1124.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=345bp|location=Sequence derived from alignment at H-akashiwo_Contig1124:251675..252019+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1124:251675..252019+ >mRNA_H-akashiwo_Contig1124.6.1 ID=mRNA_H-akashiwo_Contig1124.6.1|Name=mRNA_H-akashiwo_Contig1124.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=345bp|location=Sequence derived from alignment at H-akashiwo_Contig1124:251675..252019+ (Heterosigma akashiwo CCMP452)back to top |