mRNA_H-akashiwo_Contig1122.7.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: A0A7S3XZE0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZE0_HETAK) HSP 1 Score: 267 bits (682), Expect = 1.890e-85 Identity = 148/158 (93.67%), Postives = 148/158 (93.67%), Query Frame = 2
Query: 2 YPGLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGLKGILLALC 475
YPGLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRK LLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGLKGILLALC
Sbjct: 323 YPGLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRK----------LLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGLKGILLALC 470
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: A0A835YW30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW30_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.050e-39 Identity = 84/147 (57.14%), Postives = 101/147 (68.71%), Query Frame = 2
Query: 11 LSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGL 451
+S IPI S+ TVAAAS P + PL ++G ++GV MQLFFA TGA+G IA V+ TAP + FS +Q+A H+ VG GRAL LP QLLLASNANVGGPT+AAA A +K W LVLP+LL GI GYA ATFVG+GL
Sbjct: 241 ISGIPITSLLTVAAASAFPKVLAPLGVAGAQVGVLFMQLFFAVTGASGSIAVVMRTAPTLLAFSAIQIAAHYAFTVGAGRALRLPFN----------QLLLASNANVGGPTTAAAFAASKRWSALVLPALLTGILGYAVATFVGIGL 377
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: D8LIU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU9_ECTSI) HSP 1 Score: 148 bits (373), Expect = 5.370e-39 Identity = 83/147 (56.46%), Postives = 105/147 (71.43%), Query Frame = 2
Query: 11 LSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGL 451
+S IP+V++ TVA A+ AP L G ++G+ LMQLFFA TGA G +A V+ TAP + VFS+VQ+A+HFGVLVG GR LP R +L LASNANVGGPT+AAAMA AK W +LVLP+LL G+ GYATATF+G+G+
Sbjct: 411 VSAIPLVTLVTVAGATAAPSWVGRLGSVGAQLGILLMQLFFAVTGAQGSLAVVMGTAPSLLVFSLVQIAVHFGVLVGVGRLFRLPFR----------ELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGI 547
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: A0A7S2JTJ9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTJ9_9STRA) HSP 1 Score: 135 bits (341), Expect = 8.210e-38 Identity = 82/156 (52.56%), Postives = 105/156 (67.31%), Query Frame = 2
Query: 5 PGLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGLKGILLAL 472
PG S +P++S+ TV AS P F L +G IG+ MQ+FFAA+GA G I V+ +AP +F+FSV Q+ +HF L+G G+ L L L +L LASNANVGGPT+AAAMA AKNW LV+P+LL+GI GYATAT + LGL GIL+ L
Sbjct: 10 PGTSSLPLISILTVVGASTFPKFFSSLRTTGTAIGILFMQMFFAASGAAGSILLVLRSAPSLFLFSVSQIGIHFLTLMGIGKYL-LKLDD--------NELYLASNANVGGPTTAAAMAQAKNWTRLVMPALLIGILGYATATAIALGLGGILVRL 156
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: A0A061SLX0_9CHLO (Duf819-domain-containing protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SLX0_9CHLO) HSP 1 Score: 133 bits (335), Expect = 1.030e-36 Identity = 76/149 (51.01%), Postives = 98/149 (65.77%), Query Frame = 2
Query: 5 PGLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGL 451
PGLSI PI+++ +V A+ AP + PL SG + +MQ+FFA GANG IA VV AP +FVF+++QVALH +++G G+ LG LR LLASNANVGGPT+AA MA AK W ++PSLLVG GYA ATF+ + L
Sbjct: 28 PGLSI-PIITLLSVCLATAAPRVLAPLVASGEGLAAIIMQIFFATVGANGSIASVVTKAPALFVFALIQVALHLAIVLGAGKILGYTLR----------DXLLASNANVGGPTTAAGMAAAKGWKSSIVPSLLVGTLGYAIATFISVAL 165
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: B7FUA6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUA6_PHATC) HSP 1 Score: 131 bits (330), Expect = 5.870e-34 Identity = 79/155 (50.97%), Postives = 108/155 (69.68%), Query Frame = 2
Query: 8 GLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGLKGILLAL 472
G S +P+ SV TVAAA+I P F + +G +G+ +Q+FFAA+GA G I+ V++ AP +F FS +Q+ +HFGVL+ GR + R +P +++L LASNANVGGPT+AAAMA AK+W LVLP+LLVGI GYA+AT + L L IL+ L
Sbjct: 219 GTSALPLTSVLTVAAATIFPKFFVNIRAAGSALGILCIQMFFAASGAAGSISLVMQKAPSLFAFSALQIGVHFGVLMSVGRGI---FR--IP----SKELYLASNANVGGPTTAAAMAKAKDWKSLVLPALLVGILGYASATAIALALGPILVRL 364
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: A0A6U6CH16_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6CH16_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.120e-33 Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 2
Query: 8 GLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGLKGILLAL 472
G S +P+ SV TVAAA+ PG F L +G IG+ MQ+FFAA+GA G IA V++TAP +F+FS +Q+A+HF LV G+ + K +L LASNANVGGPT+AAAMA AKNW LVLP+LL+GI GYATAT + L L LL L
Sbjct: 359 GTSPLPLTSVLTVAAATTFPGFFSCLRETGSTIGILFMQMFFAASGAAGSIALVLKTAPSLFIFSALQIAVHFVSLVSLGKYVFRLDEK---------ELYLASNANVGGPTTAAAMAQAKNWQRLVLPALLIGILGYATATPIALVLGPHLLRL 504
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: A0A7S0TFM1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0TFM1_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.230e-32 Identity = 77/153 (50.33%), Postives = 103/153 (67.32%), Query Frame = 2
Query: 5 PGLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGLKGIL 463
P LS + I S+ TV AA+I P FR L SG IG+ +Q+FFAA+GA+G + V+ AP + FS++Q+A+HF L+G GR + ++ P +L LASNANVGGPT+AAAMA AK W+ L LP+LLVG+FGYATAT + L L +L
Sbjct: 243 PSLSSMVITSIVTVLAATIQPKWFRKLRSSGSAIGILFLQMFFAASGASGSLLLVLRRAPSLVAFSMMQIAIHFVFLIGIGRGI----FRLDP-----NELYLASNANVGGPTTAAAMAQAKEWNRLTLPALLVGVFGYATATALSLSLGPLL 386
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: A0A1E7EVM0_9STRA (DUF819-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM0_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.250e-32 Identity = 77/153 (50.33%), Postives = 101/153 (66.01%), Query Frame = 2
Query: 8 GLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGLKGILL 466
G+S +P++S TV AA+ P F L+ +G +GV +Q+FFA +GA G I V+E AP +F FS +Q+ +HF L+ GR + L K R+L LASNANVGGPT+AAAMA AK W LVLP+LL+GI GY+TAT + LGL ILL
Sbjct: 229 GVSSLPLISTLTVIAATAFPKFFSSLSETGTALGVIFVQMFFACSGAAGSIRMVLEKAPSLFAFSALQIGIHFATLMAIGRGI-FKLPK--------RELYLASNANVGGPTTAAAMAQAKEWKKLVLPALLIGILGYSTATALALGLGPILL 372
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Match: A0A7S3PV23_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV23_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.700e-32 Identity = 77/152 (50.66%), Postives = 103/152 (67.76%), Query Frame = 2
Query: 8 GLSIIPIVSVATVAAASIAPGLFRPLTLSGGKIGVFLMQLFFAATGANGHIAKVVETAPMVFVFSVVQVALHFGVLVGGGRALGLPLRKVVPVGGGARQLLLASNANVGGPTSAAAMAGAKNWHDLVLPSLLVGIFGYATATFVGLGLKGIL 463
G+S +P++S+ TV A+I P F LT++G IGV MQ+FFAA+GA G I V++ AP +F+FS +QV +HF L+G GR L +G ++L LASNA VGGPT+AAAMA +K W LVLP+L+VGI GYATAT + L L +L
Sbjct: 247 GMSSLPLISMFTVIGATIFPTFFSTLTITGTTIGVIFMQMFFAASGAAGSIKLVIQQAPSLFLFSGLQVLIHFASLIGIGRLL---------LGLKTKELYLASNACVGGPTTAAAMAQSKEWDRLVLPALMVGILGYATATPIALVLGQVL 389 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1122.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1122.7.1 >prot_H-akashiwo_Contig1122.7.1 ID=prot_H-akashiwo_Contig1122.7.1|Name=mRNA_H-akashiwo_Contig1122.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=159bp LPWSEHHPHCECCNCGCSVHCSGSFPPADTIWGQDWGLSHAALLCSHWSKback to top mRNA from alignment at H-akashiwo_Contig1122:355702..360646- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1122.7.1 ID=mRNA_H-akashiwo_Contig1122.7.1|Name=mRNA_H-akashiwo_Contig1122.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=4945bp|location=Sequence derived from alignment at H-akashiwo_Contig1122:355702..360646- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1122:355702..360646- >mRNA_H-akashiwo_Contig1122.7.1 ID=mRNA_H-akashiwo_Contig1122.7.1|Name=mRNA_H-akashiwo_Contig1122.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=477bp|location=Sequence derived from alignment at H-akashiwo_Contig1122:355702..360646- (Heterosigma akashiwo CCMP452)back to top |