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Homology
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: A0A6T8J9T4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8J9T4_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.380e-54 Identity = 77/172 (44.77%), Postives = 123/172 (71.51%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALRVELGGGTLRLVPRDSY 519
+EFW+ L+P+N ++ + + L + FWK+Q+++ M+ Q+ + + G+ G AD R +L DT+PWLL +TF+V+ LH++FDFLAFKND+ F+KG K++ GLSVR++++N FFQ +IF YL+DN+TS+M+L+S+GVG+ IE+WK+TKA+R G L V ++
Sbjct: 18 SEFWMKTDSLIPINGTLKNITIALDFSVQPFWKWQMMSNMEEQWKKQEEAGGEE--GSADMLRTLLTDTNPWLLGITFVVSLLHTVFDFLAFKNDISFFKGAKSMNGLSVRSMVVNAFFQVIIFFYLMDNETSYMVLMSNGVGLVIEFWKITKAVRFSFENGKLTWVETSTF 187
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: A0A7S4B506_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B506_CHRCT) HSP 1 Score: 186 bits (472), Expect = 7.320e-53 Identity = 97/179 (54.19%), Postives = 128/179 (71.51%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALR----VELGGGTL---RLVPRDSY 519
++ W + QLLP+N + T++ L +S S ++QL AQMQA L+A L GD A D R+ML DTSPWLL +T +V+ LHS+FDFLAFKND++FWK K++ GLS+ +++LN FFQTVIFLYLLDN TS+MIL SSGVG+AIE WKV KA++ V+ G +L R+VP DSY
Sbjct: 257 SDMWTFNDQLLPINETTTDLTLTVSFSQISLMRWQLTAQMQASLELQASLHGDKA---MDDVRRMLGDTSPWLLGLTMLVSVLHSLFDFLAFKNDIKFWKNNKSMTGLSLGSMLLNLFFQTVIFLYLLDNDTSYMILASSGVGLAIEVWKVRKAIKEVRFVKPPGASLPRLRIVPTDSY 432
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: A0A0D2X1P3_CAPO3 (Transmembrane CLPTM1 family protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X1P3_CAPO3) HSP 1 Score: 187 bits (475), Expect = 8.020e-53 Identity = 91/173 (52.60%), Postives = 125/173 (72.25%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALR-VELGGGTLRLVPRDSY 519
N+FW++ L P+N + TE+PLE+S + S WK+ LL QM+ F ++ G +AD+F++M+ DT+P+LL +T +V+ LHS+FDFLAFKNDV FWK R ++AGLSVRTI +N FQ +IFLYLLDN TSW+ILISSGVG+AIE WKV+KA+ V ++PR +Y
Sbjct: 266 NDFWMMRDDLYPINETTTELPLEISFSLQSLWKWTLLIQMEQSFEMQHSW-GQMGENDADNFKRMITDTNPYLLGLTMVVSLLHSVFDFLAFKNDVVFWKKRDSMAGLSVRTIFMNIGFQFIIFLYLLDNDTSWLILISSGVGLAIEVWKVSKAVNLVPSEDKIFSIIPRLTY 437
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: A0A067BZ31_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZ31_SAPPC) HSP 1 Score: 185 bits (470), Expect = 2.440e-52 Identity = 87/173 (50.29%), Postives = 123/173 (71.10%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALRVELG-GGTLRLVPRDSY 519
NEFWLLD QLLP+N SV+ +PLE+ KF L QM F ++ + G ++ + D+ +KM +DT+P+LLAVTF+V+ LH++FD LAFKNDV FWK +K++ GLS+RT++LN FF VIFLYL+DN TSWMIL SSG+G+ +++WK+ KA+++ G L D+Y
Sbjct: 277 NEFWLLDEQLLPINGSVSSLPLEVEFAAIGMTKFALYHQMDQSFKMQQSM-GTSSKRDTDAMKKMFIDTNPYLLAVTFVVSILHTVFDMLAFKNDVSFWKSQKSLEGLSLRTVVLNAFFHLVIFLYLVDNDTSWMILFSSGLGVVLDFWKIKKAIKISRDENGKLVFAGEDNY 448
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: L8H030_ACACA (Transmembrane protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H030_ACACA) HSP 1 Score: 184 bits (468), Expect = 2.880e-52 Identity = 85/157 (54.14%), Postives = 113/157 (71.97%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALRV 474
NEFW+ L P+N + E+PL L S WK+Q++ QMQ F ++ G AA GE+D ++ML++T+PWLL +TF V+ LHS+FDFLAFKND+ FWK +KN+ GLSVRTI +NC Q +I LYL DN TSW+ILIS+ VG+ IE WK+TKA+ V
Sbjct: 246 NEFWIFREHLYPINDTTPELPLRLEYNTLSMWKWQMMVQMQHSFKMQESW-GSAAEGESDEIKRMLVETNPWLLVLTFAVSILHSVFDFLAFKNDISFWKEKKNLEGLSVRTIFVNCITQFIILLYLFDNDTSWIILISASVGLLIEAWKITKAVEV 401
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: A0A7J9JG86_9ROSI (Uncharacterized protein n=2 Tax=Gossypium armourianum TaxID=34283 RepID=A0A7J9JG86_9ROSI) HSP 1 Score: 174 bits (442), Expect = 1.040e-51 Identity = 84/176 (47.73%), Postives = 120/176 (68.18%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALRVELGGG----TLRLVPRDSY 519
NEFWLL +L+ +N SVTE+PL L VG S K+QL Q+ F + G GEAD +++ ++ +P+LL +T +V+ LHS+FDFLAFKND+QFW K++ GLS ++++++ Q V+FLYLLDN+TSWMIL SSG+G+ IE+WK+ KA+ +E+ LR RDSY
Sbjct: 11 NEFWLLRDKLIAINESVTELPLNLEVGPISMMKWQLFLQIDQSFQIHRSY-GSMLEGEADELKRVFLEGNPYLLVITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVVSFLCQLVVFLYLLDNETSWMILASSGIGVCIEFWKIGKAMHIEIDRSGRIPMLRFRDRDSY 185
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: UPI001CFC47A5 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFC47A5) HSP 1 Score: 182 bits (463), Expect = 4.030e-51 Identity = 83/159 (52.20%), Postives = 117/159 (73.58%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALRVEL 480
NEFW + +PLN S+ +PL + + + S +K+Q QM+ ++ L + E D ++ML DT+P+LLAVT IV+ LHSIFDFLAFKND+QF+K +K++ GLS+R+I +NCFFQTVIFLYL DN TSWM+LIS+G+G+ IEYWKVTK + +++
Sbjct: 274 NEFWTIREHYVPLNDSLASIPLTIELSVTSAYKWQFFLQMEESLKMQKQLGSEEE--EQDEIKRMLFDTNPYLLAVTIIVSILHSIFDFLAFKNDIQFYKNQKSMEGLSIRSIFVNCFFQTVIFLYLFDNDTSWMVLISNGIGLLIEYWKVTKVVDIKI 430
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: A0A371FPR4_MUCPR (CLPTM1-like membrane protein cnrB (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371FPR4_MUCPR) HSP 1 Score: 176 bits (447), Expect = 7.870e-51 Identity = 86/176 (48.86%), Postives = 122/176 (69.32%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALRVELGGG----TLRLVPRDSY 519
NEFWLL +L+PLN +VTE+ L L VG S K+QL Q+ F + + G GEAD +++ ++ +P+LLA+T +V+ LHS+FDFLAFKND+QFW K++ GLS +T++++ Q +IFLYLLDN TSWMIL SSG+G IE+WK+ KA+R+E+ L+L R+SY
Sbjct: 59 NEFWLLRDKLIPLNETVTELSLNLEVGPISMTKWQLFLQVDQSFQIHRNY-GSMLEGEADELKRVFLEGNPYLLAITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKTVVVSFICQLIIFLYLLDNDTSWMILASSGIGCVIEFWKIGKAMRIEIDRSGKIPMLKLRDRESY 233
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: A0A1V9YRL3_9STRA (CLPTM1-like membrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRL3_9STRA) HSP 1 Score: 181 bits (459), Expect = 9.710e-51 Identity = 87/173 (50.29%), Postives = 122/173 (70.52%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALRVELG-GGTLRLVPRDSY 519
NEFWLLD QLLP+N++V +PLE+ KF L QM F ++ ++ G + + D+ +KM +DT+P+LLAVTFIV+ LH++FD LAFKNDV FWK +K++ GLS+RT++LN FF VIFLYL+DN TSWMIL SSG+G+ +++WK+ KA+++ G L D Y
Sbjct: 275 NEFWLLDEQLLPINSTVATLPLEIEFYPLGITKFALYHQMDQSFKMQQEM-GTSTKKDTDAMKKMFVDTNPYLLAVTFIVSILHTVFDMLAFKNDVSFWKQQKSLEGLSLRTVVLNAFFHLVIFLYLVDNDTSWMILFSSGLGVVLDFWKIKKAVKISRDENGRLVFAGEDHY 446
BLAST of mRNA_H-akashiwo_Contig112.14.1 vs. uniprot
Match: A0A6A5BLS5_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BLS5_NAEFO) HSP 1 Score: 181 bits (459), Expect = 1.270e-50 Identity = 82/158 (51.90%), Postives = 116/158 (73.42%), Query Frame = 1
Query: 4 NEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEADLSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFWKGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYWKVTKALRVE 477
NEFW + +PLN S+ +PL + + + S +K+Q QM+ ++ L + E D ++ML +T+P+LLAVT IV+ LHSIFDFLAFKND+QF+K +K++ GLS+R+I +NCFFQTVIFLYL DN TSWM+LIS+G+G+ IEYWKVTK + ++
Sbjct: 269 NEFWTIREHYVPLNGSLASIPLTIELSVTSAYKWQFFLQMEESLKMQKQLGSEEE--EQDEIKRMLFETNPYLLAVTIIVSILHSIFDFLAFKNDIQFYKNQKSMEGLSIRSIFVNCFFQTVIFLYLFDNDTSWMVLISNGIGLLIEYWKVTKVVDIK 424
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 192875.XP_004349086.1 |
| Preferred name | CLPTM1 |
| PFAMs | CLPTM1 |
| Model size | 521 |
| Max annot lvl | 33154|Opisthokonta |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0002682,GO:0002694,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007275,GO:0008150,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032501,GO:0032502,GO:0033081,GO:0044425,GO:0044459,GO:0044464,GO:0045580,GO:0045595,GO:0045619,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0051239,GO:0051249,GO:0065007,GO:0071944,GO:0098552,GO:1902105,GO:1903706,GO:2000026 |
| Exons | 6 |
| Evalue | 1.32e-53 |
| EggNOG OGs | KOG2489@1|root,KOG2489@2759|Eukaryota,38BC2@33154|Opisthokonta |
| Description | apoptotic process |
| Cds size | 519 |
| COG category | L |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681387088.402929-CDS-H-akashiwo_Contig112:352427..352527 | 1681387088.402929-CDS-H-akashiwo_Contig112:352427..352527 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig112 352428..352527 - |
| 1681387088.4126863-CDS-H-akashiwo_Contig112:352922..353038 | 1681387088.4126863-CDS-H-akashiwo_Contig112:352922..353038 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig112 352923..353038 - |
| 1681387088.4212759-CDS-H-akashiwo_Contig112:353387..353486 | 1681387088.4212759-CDS-H-akashiwo_Contig112:353387..353486 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig112 353388..353486 - |
| 1681387088.4295044-CDS-H-akashiwo_Contig112:355779..355857 | 1681387088.4295044-CDS-H-akashiwo_Contig112:355779..355857 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig112 355780..355857 - |
| 1681387088.4387574-CDS-H-akashiwo_Contig112:358047..358122 | 1681387088.4387574-CDS-H-akashiwo_Contig112:358047..358122 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig112 358048..358122 - |
| 1681387088.4483786-CDS-H-akashiwo_Contig112:362849..362900 | 1681387088.4483786-CDS-H-akashiwo_Contig112:362849..362900 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig112 362850..362900 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig112.14.1 >prot_H-akashiwo_Contig112.14.1 ID=prot_H-akashiwo_Contig112.14.1|Name=mRNA_H-akashiwo_Contig112.14.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=173bp
ANEFWLLDSQLLPLNASVTEVPLELSVGIASFWKFQLLAQMQAQFALEAD
LSGDAAGGEADSFRKMLMDTSPWLLAVTFIVTTLHSIFDFLAFKNDVQFW
KGRKNVAGLSVRTIMLNCFFQTVIFLYLLDNKTSWMILISSGVGMAIEYW
KVTKALRVELGGGTLRLVPRDSY back to topmRNA from alignment at H-akashiwo_Contig112:352426..362900- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig112.14.1 ID=mRNA_H-akashiwo_Contig112.14.1|Name=mRNA_H-akashiwo_Contig112.14.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=10475bp|location=Sequence derived from alignment at H-akashiwo_Contig112:352426..362900- (Heterosigma akashiwo CCMP452)
GCGAACGAGTTCTGGCTCCTCGACTCGCAGCTGCTGCCCCTCAACGCCTC
CGTGAGCTCCCTCCTCCGCCCCCCCCCCCCCCCTCGACTCCCTGCCAACA
TCCGAACGAAGACACAGAACCAGGCAGCGCCTTTCTTCCCTGTTTGCTTC
TTTGTTTTTCGTCATCATCATCATTTTTATTTTTGGTGTCATAGCCTATA
CTATGTATACTGCATAGTTCGATGATTGCCAGAATAATTTTATTCGACTG
TGGGTAAGTCCCTGAATAGGCGTTCCTGGTTTTTTTTTTTTTTTTTTTAA
ATTAAATTGTAGTCTCTGACAAGACGATCAGTATAGTTCTGTTCTGATGA
CTCTTTAAATCACACCTGGATGGGGGTGCTTGCCCGGAAAGTGGTCTGAT
ACACTGTGAGGCCGAATGCGGCCTCTGCAGTCTGGTGTAGGCCGTGGTAA
TAATGTTGATACTAGTATTCCTGCTGTTTTTTTTATTATTATATTTGATT
TTGCAGGGTGTTGGGTTTAAACAGAGAACCGCTTTCAACATCAGTGAGTA
TAGCTCCATACTGCCAAGAAGGCAATATGTCAAAGGTTTTTAATCATTAA
GTCCATGGCAACTATGCTGCATTTCGGCTACTACAAGCCACGGCTGGCGG
CTCTCTCCATCCTCCGCCAGCCTTCATCAGGCTGCCTCTGACTAAAATGA
AAACCAATTTGAAGATGGGAAGTGAATGAAAGAAGAAGAATGGACAACGA
AAATGAAAAGCTGCAATGGCTGGAGCCAACCGCCACCACCAGTCATTGTT
GTCTCATGTACCTCAGCTGTTAAGGAAACATTCTGCCCTCCTTCTCCTCC
ATGTTCACAACAAATCTGAGCATCATCATCATAACCGGCACAGGTGCTGG
TCACGAGCCTCAGAACAAAAGTCCAGGGCCTGAGGAACTACATAAGCTCA
ACTGTTTTGTGGTTAGGTCTGAATGTTCTCTGCGCCCTCTATGCCTATAT
GCCCGATTCCTCCTTTTCCATGGTCGATCTCTTCGGCTAGGAGTTTCTAA
AATCTCGTAATAATGAAAGGAAAACATATATTTTCAAGGGTAATTAGGTT
CCTATGAATACTCTCAATCTCTATGACTGATTAAAAAAATGTGGAATTTA
TACAAATTTACCACGAAATCTGGATGAGATTTCTTTTCACAACGAGATTT
ATTTTCCACAAGTCTGTCGTTCAATCTCTAGTAAAGAAGTATTATTGAGA
AGAACTATGCAAACTTTTATCTAAGGTCGGCTCAGCTAGAAACTTCCCAA
ACTCGCTCAGCTTTTTGTCGAATTCTAAAAAAATGCTGCATTGAAACGAA
TGTTAAAATATGCCAATCTCTCGTTGAAACCTCATTAAAATCTTGATATT
CCCTCCGAAGCCCAGCTAATTGTGACAGATTTCGTCTGAATTCGTGTCAC
CTTCTTTTTTGGTGTGTAATCTTTTTATTGAACAGACAGAAATAAATAGA
TTGCGTATGAATTGAAATGATCAAAAAAGACAAATGATGAAATATGAGCT
TGAGAAAGGTTTAAGCCTGCTGCTGCCTCCTCGACGCCGCCGCCACCATC
ATCATCATTCACTTTTTTGTTTTGCTGCTGCTGCTGCCATCATTGTCGTC
GAAGCTAGTCGAAGCCGAAGCGCTCATGTAGTAGCAGGCACAAGAAGGCA
CAAGCGAGCGCTTGAGGCCTCTTCTGCAAAGATTGTTACAAAAGTAAAAA
TGATAGAGGTTTGTAACAGGCATCGAACCTGCGACGTTCAGATTTGGAGT
CAAGCTCTTACACAGCTGAGCTATTTGATTCTGTTCGAAGTCGGGGAAAA
ATGCTTTTTCGTGGCCAACTTCACCTCGTCACATGATTGGGATTTCACCT
TCAACTTCAAACGTCTGCGACAGAGATGAGGATAATTATGCCAATGGTTG
GCACTTCCAATCACTCGTCCCAGAAGGACTTCAACGATCAACTTTTCATC
ATTCTTAAAATCACATAATGATTTTCATTATGACAATGTGATTTCAAAAA
TTACTTTGTTTTTAAAATTATAATATCGTTACGAAAATTAACTCCGGCGA
AATCTTCAATAATTACCCGCAAGCTGCCCTATATATACGTACAAGAAGAC
ATTGGTTGTGGCTCAGGAAGTGAGAGGAGCACATTGCATGGGACAAAAAA
ACGTACACAAAAAAAAAATCTATATATATATACATACAGTTGTTTTGGTC
AAATTTAACTCTCCATTTCTCTATTAACTCTGCATGTATAAAATACATGC
ACACATAAATAAATAAATATATATATATAATAGCCATCAGTCACTCTGGC
TGCTGGTCGCTCGGGAGCTTCCTTTTCCCGTTGCCTGGAACAGGAGAATG
CAAGTAGTAGCAGAGGCTTGGTGACTGAAAATTCTTCACAGATTCCTGAG
GTGATTGGGGGTCTACATGACTTGTCTTTGGTTCTAGAGGAAGAAGCAAG
AAAAGATGGGACTGTTGGGAGCTTGGTTCACTCGATCCTTCATGAGGTGA
TTGATGAAGCTGTGGCACTTCATGAGATGGAGAGAGGTCCATGTGGCGAA
CTTGGCTTCATGATTCCATCTTCCTGGCTCCTGGAAGAGGCAGGTCTGAT
GAAGAGGATCAAGAGAGAAGCTGGTGAGGCCCGCTAAGCGGGTACTGCAG
CTTGAAGAAGGAGTGGGTATAGGTAGGTATATATTGTTATCATAGTATGC
AGATTAGCTAGTTTGTCATAGTAGGTATGTGTGAAGGAATGGCACCAAGA
TGCAAGGCGTAGATTGTCTTTGTTGAAATTTAACTTCTATATATATTATA
TATATATATATATTTATGCAAGGGCCAGGGAGGTGTTCGCGGAGTACCCT
GACCTTGAGATCTTCTCTCACCACAGGTTTTTGGGCGGATGCATTGGCGC
AAGTGCCGGGTTGGAGGCCTACGTGAAGAAGAAGGCCGCCACTTGGATGG
AGTGTGTACGGCACCTGCCGCAGGCGGCGGAAAAGTTCCCTCAGTCTGCG
TACGTGGCTTTCACTATGTCGCTGCAGAGTGGGTGGAAATTCCTTCAGCG
ACTGATTCCGGAGTCCTCCGCTTGGTTTGGGGAGTTGAACGATGTGATCC
AGCACGATTTCATCCCTGTGCTGCTTGCCAAGTGGCAGTTCTCTGAGGCT
GAGATGGAGCTCTTCGAGCTCCCCGTCAGGTGGGGGGGGCTAAGCATTCT
CAACCCAACCAAGGCCGCGCAGTCCTTCTACGAGCTGTCCTTTTCTGCCA
ACTCCATGGTGCGCGAAGCCATCCTGGGTGACGAGCCTCTGGATGTGCCT
GGACACCCTGCCTATTGTGCTGGCCAGCAGCGGAAGCGCAGGGCGGAGGG
GGGGCGGAGCTCAAGGCTAGGTATGAGGAGGTGCTGAGCAAGCTGAGGCC
GGAGCAGAGGCAGAAGGTGCAGGGCCAGGTGGACTCCAAGGACATGTCGT
AGATGTCTGTGGTGCCCCGTGCAAAAGAGTCATTTGACTTGTCCGCTCAG
CAGTGGCGCGACCAGGTGCACCTCCAGTACGGGTGGGACCTTCAGGGGCT
GCCTGAGAGCTTCGATGGACGTGGCAAGCGCTTCTCCACGGATCATGCCC
TCATCTGCATGAAAGGGGGTCTTGTGGGGTGGGGCCACAATCATTTCCGG
GATGTCATGGGGGAGTTCAGCCGGAAGGCCCGGAATAACTGCACCTGGGA
GTCGGTGGTGAGGGAGGCGTCGCAACGTGCCAGGGACGGAGGTAATAGCA
ATGGCTTGACCGAGGATTTTGTTGAGAGGGGTGTGTGGGAACCTGATAGG
GACTGTCTTTTTGATATTACCCGCATTATACATGCTGGCAGCCCTGGACG
TGCATCCCAACACATCTCTTACCAGAATGCCCTCAATACCTCTGCCCGTG
AAAAGGTGAGGAGGTACCAGTCTGCTACGGAAGAGCGCCGTGCTACTTTC
TGCCCCTTGATAGTCACTGCGGAGGGTATTGCCCACCAGTCCACGCGGGC
CTTCCTCAGGCGCATTGCTGCTCGGCTCTCGGAAAAGTGGCAGAAGCCTC
TCTCAACAGTCAGCAACTGGGTGCGTGTCCGCGTGCAGTTCACGCTCATC
AAAGCGGTTCGAGAATGGCGAGAGGATTGTCGTTTTCTTCCAGAGATAGT
GGTGTGTGCTGTATATTCTTGTTTGGATATTATGTTTTGTATTGATTCGG
GTTTTGGGATTTCATCTTAAGGTTTTAGTAGTTACCACAGGGACATCTGC
ATAGATGCGAGGTGTAGGTTGTTTTAGTTAAATTTAACTCTATATTTCTT
TGTGAGTGTTTGCATAGGGCAATAATTTGAAACAAAAAGCAAGTCGTTTT
GTTTTTGTTGCCAGAAATACAAAGTTTAAGTAAATCTGACTCATTGGGTC
TAAAGGAATAATTAATTGATTAATATATAAGACCATCAATCAGGGCATAG
AAAATTCCAAAAAGGAAGATGTTGACCCAGTCTAATGCTTCACGGACACC
ATCAAAGCTTAAAGGCCAAGGCCAAAATCACTGCTATAGCGCATGAAATA
CAACATCATGAAAGTATAATGTGTGATGATTCCAATATTTGAAAAGAACT
GTTGCAAAAATTAATTATTAAAATAAACAAAAAATATAAACTTCTCCGTT
TTTCAATGATGTAATTACTTCATAAAACACTTCAGGGGGAAGATTTTTTT
TTGGTGTGTGTGCTGCTTTTTTTGGCAGGTGACGGAGGTGCCACTGGAGC
TGAGCGTGGGTATCGCCTCCTTCTGGAAGTTCCAACTGCTGGCCCAGATG
CAGGTTTGATCCCGTCCATCGGTCTGCGGGGGCGGGGGGTGGGCAGTGCA
GCACACTTGCGAGAAGAAATGGGGGAGGGAGGGTGGAGGCAGAGCTTCGC
CAAGCCCATGGTGACGAATGATACCTTAGTCCCGCCCGCTGCCCTGCTCT
GATCTCTAGCCCTGAGGAGGTTGCGTGTGGAGTGATAAAGCAGCACCCCA
GCCTAAGGTGGGACGGGGGAAAAATATCGCACCTGGCACAGCCCATCACC
CGTTGCGAAGTTGTTGAATCGCTGCGCACACCATGGTACCTACATATTGA
CAATATTATATATTTATCATCAATTATATACACCACCAACCCAAAAAAAC
ACAATGAAAAGTGCTTTTATATTTCAGAGATCAAAGGAAATCGTATAGTA
AAGTGGGCACCCATCTCTGCTTCTCCTTTAGTAGGATAACCAACGCAGCT
GCTTCCGCCACATTCAAATTGGAAATCAACAACAACAACCAAAATATTAA
TGGAAAATACAGTTCTCCTATTTCTCCTGTAGTGACCAAACAACAGCTGG
CTATTCACAACCGACAAAGTCATCTGAAGCTATTTATTGCAGATCATCCA
AAAGAAGAAAGTCTAGAATCTATAATATTGACCATGATTGTCATTTTCAG
TCACCATATTATTTTCATGGATGAAAATAGGCGAATCATATTATGGCCAC
ATTCATACCTCGGAGTACGCTGTTCGCAGTCTCACATCGTCGTTCCGCAG
GTACACAAATTGTAGCACGCTCATGAAACAAAAATCCCAAAGGTGTATGT
CGCTAGACACTGGGAGCATCGAGTGTCATTCATCTAAACGCTTACCCCCT
TTGTGAAACGAGGTAAAGTGCTTACATACCAAAAAATCACTGCAGTATGA
AGGCCAGAAATCCCAAGGATGCTACCAAGTAGACCAAAGGCTTTTGGTGA
TGCTCCTGCATTTTGCATAGACCAAAGAAGAATACTGAAGACCGCGCTTA
TTAACTGGATAATACTGCCGTGAAATCAGCGTATCATAGAATCACTGAGC
AAAAGAAACAAACCTAGTTCGAGCTCAGATTAGATGGAAAGTGTCCAGCA
GGTGGTGATGGTGCAGTTACAGAAACCCATACACGCTCCTCTGCGCAGCC
GTAGACAAATCTAATCTCAGGTCCAAACAAATGTTGAAGGTAATACTATC
AGGGTAGTTGTCAAACACATCCAGGTTGAGCCTATCAGACTGATACAGGT
GCTGGGGAATGACTATTCAGCCAGCCAGTCAGAGCTACCAAGCGACCAAA
ACTCAAAAGCATAAGAGCTTCTCACGTAGCCAGTCAAATTTGAGTCACTA
AGAAGAGTCTCTTCGAGCTCTCTCCTCTAAAAGGACCAGGCTGTTCTGTC
TGTTGTTGCTTCGCAAATCAAGGACTGGCATCAAACTTGCATAAACCCAG
TCCTAGCAAGAGTGAGCTTCGCAAGCACGAAGAACACCGCAAGTGGCTTT
GACGGCCCAAAGAAGCAAGCCAAGCGCCCCCCGCAAAAGAATACTAGAGT
GTGCCGATAACCAATCAAATGTGAAGAACCACGATGAAAAGTGTGGGTTC
CCAACAAGGGAAGGCAAAGGAGCCAAAAACCAGGAAAAGACTTTTATGTT
TCAGATATCAAAGGAAATGTATAGTACAGTGGGCTTTGGTAGGGCGACCA
ACGCAGCTGCTTCTGCCATTCAAATTTGAAATCAACAACAATATAACCAA
AAAATGGAAAACACAGTTCCTATTTCTCCTGTATAGTGACCAAACAACAG
CCGGCTATTCACAAGCAACAAAGTAATCTGAAAGCTATTGCAGATCATCC
AAAAAAAAAAGGAAGAAAGAAGTCTAGAATCTAAAATAATCTTGACCATG
ATTCTCATTTTCAGTCACCATATTATTTTTCATGGATGGCAAGAGGCAAA
TCATAGTATAACCACAGTTGTGCCTCTGAGTACGCTGTCCGCAGTCTCAC
ATTGTCGCCCCACAGGTACAAAAATAGGAGCACGCTCGTGAAACAAAGCC
CAAAGGCGTATGTCGCTAGACACTGAGAGGTGTCAAGAGCCATTCATCTA
AATGTATGTATATAATATATATATTAAATACACCAATGAGCAATGCACTG
TCCATGTTGTGTGAAGGCCTGGGCAGCACAAGCCCCCCACCAGGCTCAGT
TTGCCCTCGAGGCTGACCTTTCCGGAGATGCCGCCGGCGGGGAGGCCGAC
TCCTTCCGCAAAATGCTCATGGTTAGCCCCCCCCCACCCCCCCGCTCCCG
CCCCGTCTGCCACCCTCCTGTCCCAGACGGGAGTGCCGCGGCCACCCTTC
TCCTGCTACGCACCCTGACCTGGCCTGGCGGTGGGGTGGCCGTTTTCTTT
GGCTGCGGTCTTGATTTAGAAGGCAGGAGTCTTCTATCATGGACAGTTTA
ACTCTCTTCCAAGTATAGTAGTGAAAGAGAATTAAATTGAAACAAAACAA
CCTACGCCGTGCATCTATGCAGATGTCCCTGTGGTAATGTGCTAAAACCT
AAACATGAAATCCCAAAACCCGAATCAATACAAAATACTATCCAAACAAG
AATACAGCACACCCCACTATCTCTGGGAGAAAACGGCAATCCCCTCGCCA
TCCCCAAACCCCGGGCTCCTCCACTTCTTCCTGGAGCCTCTGGTCCGCAG
ATCCACCGCTTTGATGAGCGCGAACTGCACGCAGACACGAACCCAGTTGG
TTACTGTTTAGAGAGGCTTCTGCCACTTTGCCGAGAGCCGAGCAGCAATG
CGCCTAAGGAAGGCCTGCATGGACTGGTGGGCAATACCCTCCACAGTGAC
TATCAAGGGGCAGAAAGTATAGCACGGCACTCTTCCGTATCAGCCTTGTA
CTTCTTCACCTTTTCACGGGCAGAGGTATTGAGGGCATTCTGGTAGGAGA
TGTGTTGGGTTGCACGTCCAGGGCTGCCAGGATGTATAATGCGGGTATCA
AAAAGACAGTCCCTGTCGGGTTCCCACACACCCCTCACATAAAATTCCGC
GGTCAAGCCATTGCCACCTCCGTCCCTGGCCCGTTGCAACGCCTCCATCA
CCACCGGCTCCCAGGCGCAGTTGTTCGAGGCTTTCCGGCTGAACTCCCCC
ATGACATCCTGGAACTGGTTGTGGCCCCACCACACAAGACCCCCCTTCAT
GCAGATGAGGGCATGATCCGTGGAGAAGCGCTTGCCACATCCATCGTACC
TCTCAGGGAGCCCCTGAAGGTCCCACCCGTACTGGAGGTGCACCTGGTCG
CGCCACTGCTGAGCGGACAAGTCATATGACTTGTTGATGATGATGATGAT
GGGCCTCCTTCTTCTCCTTCTCCCTCCTCCTCCCGCTGCGCAGCAGCAGC
CGGCGACTCTTCCTGTCACTCAGAGTTCCTCCCAGCCCCGCTCGCCGTGC
CCATTTACTGGTTGTCCTCTTCAGGCTCACCAAGCGGTGACGGCTGTGAA
TCTTCCCGCTGCCCGTTCTCCCCGTTGGGCTCCCCCCCCGAATCCAATTG
GCCATTCCCATGGCCAATCTCCTGCGAACCATCCGAAATGTTGTTGATGC
GGAGAATAATCCGTTCCCCTCTTCTGATCCTGTCAGTAAGCCCACCCCCC
TGTGCCCCCTGAGAATAATCTGTTCCCCTCTTCTGATCCTGTCAGTAAGC
TCATCCCCTTGTGCCCCCTGTTGTTTCCCCCCCCCCTTTGTCGCTCGCAC
GGCCATCGACCCTCCTCCTCTGCTGCCTCCTCTGCTCGTGCTCTCCTGCT
GCTGCAGCAGGAGACGGCGTGCTGTTTTGAGCAGCAGGCGAAGAAGAAAG
CGAAGGCCTTGATAATGGGCTTGCCCTTTGGTTGGGCTGACGACAAAACC
CTGCGCCCCCCAGTTGGCGCCCACTGCTACCACTAGCCCCAATGTTCCTT
GGCGTCGTGGCAGCTCCTCCAGATTGTGCTTGACCGCCCCAGCCTGTCCT
TGAATTCCTCTGACTTCTGCCCCTGCTCGCAAACCAAAGGGAGCCCCAGC
CTGCCTGTGTCACCGGCCCTGGAAAATCTCACGCCGGATGACTGCTGTTG
CAGACGAAGTACCCCGACAACTGTCCTTGCCGAAGCCCTATCCCCCTCCC
CTTAACTCCCACCTCCTCTCTGCAGCAAGTCGTTGCCGCGCTCGAGTCGA
TCCCAATTACAAAACACAGGTGCATGGTATTGCACAGCTGCCAGTGCTTA
TAAGCGCAAACATGCAGGCTGGGACACTCCTTCCCCTGAGCGTCATGTTG
GCATCTCACCCTAGTCAACCTAACCGCCAGGTGCGTATTTGCGCTTTGCA
GGCATTGCCAGCAACCCAAACACCGCTCCCGTGCCCCACAATGTGGGTAT
TAGCGGTGTAGCCCCCCGGCCATCGGTCCATAGACCGGGGCCTCTATTAG
CATTCTAGTATGACTCGATTTTTACTTCTCTAACAATTCTAAAAAGAAGT
GGGGGGTTATATATACATCTAATAAGTTGCCCTTGCTCCTCCCCCCCCCT
ACCCCTTGGTTCAGGATACTTCCCCTTGGCTTCTAGCAGTCACTTTCATT
GTCACCACTTTGCACAGCATTTTTGATTTTCTGGCGTTCAAAAATGACGT
GCAGTTTTGGAAGGTAAGAGCAGAATCAGTTAATGATTATTTGTGCATCA
TGCATATTATATAATAAAAATATATATATATCAAGCTGTCAGTATATTCA
TATGGTGGTATATCAAGTAGGAAACGGGAACCGAATCCATGATTCAAGAA
CCTCAGAGAAGAGGAAGAAATGGTGGAAAACGGGAAACAGGAAACCTGGT
GACAACAGCTGGATACAATAAAATAAAATTCAAATCATTCAGTACGCCAT
GTTTTGCTGCTATACATGCAGAAGGGGTACCAGACTGATCTCGGAGTGAT
TATATCGTAAAATTTACAATAATATACAACCTCAAATCTTTATCCAAAAC
CCAACACTTCAGGGACGCAAAAATGTAGCAGGGCTGAGCGTGCGAACAAT
CATGCTGAACTGTTTCTTTCAGACAGTGATCTTCCTCTATCTTCTAGACA
ACAAAACCAGCTGGATGATTCTCATCAGGTGAGATGCTCCTTCTTTTGCG
GTGTAACTTTTCTTCAGCATACATGGTTATATATATTCATAGATGGAGAA
GCAAAGCAGACTTCCATCACGTATAAACTACTTAATACTGGAACATATAT
ATATTTATGAACACTAGTAAAGAAAATGTTGTTGTTGGATGTTTTGAAAT
TAATTATATATGACATGATATAATGATGATGGCTTTTTAGTGAAAATATG
TTTTATATGTTAAGGAGTACAGAAGGGCCCATCAATGATGGTCAATCAAA
TATACAGCATAGAGAGGTTATATTAATCATTATTTTTTAAGTGCAATGTC
TTGAACCCACGGAGGGAAGGAAGCAAGCAAAAAGCGGTAGGCGGGCGCTG
CTGTTTTGGGGCGGGGGGGGCAGCTCCGGGGTGGGGATGGCCATCGAGTA
CTGGAAGGTGACCAAGGCCCTGCGCGTGGAGCTGGGGGGCGGGACGCTGC
GCCTGGTGCCCCGGGACTCCTACGT back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig112:352426..362900- >mRNA_H-akashiwo_Contig112.14.1 ID=mRNA_H-akashiwo_Contig112.14.1|Name=mRNA_H-akashiwo_Contig112.14.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=519bp|location=Sequence derived from alignment at H-akashiwo_Contig112:352426..362900- (Heterosigma akashiwo CCMP452)
GCGAACGAGTTCTGGCTCCTCGACTCGCAGCTGCTGCCCCTCAACGCCTC
CGTGACGGAGGTGCCACTGGAGCTGAGCGTGGGTATCGCCTCCTTCTGGA
AGTTCCAACTGCTGGCCCAGATGCAGGCTCAGTTTGCCCTCGAGGCTGAC
CTTTCCGGAGATGCCGCCGGCGGGGAGGCCGACTCCTTCCGCAAAATGCT
CATGGATACTTCCCCTTGGCTTCTAGCAGTCACTTTCATTGTCACCACTT
TGCACAGCATTTTTGATTTTCTGGCGTTCAAAAATGACGTGCAGTTTTGG
AAGGGACGCAAAAATGTAGCAGGGCTGAGCGTGCGAACAATCATGCTGAA
CTGTTTCTTTCAGACAGTGATCTTCCTCTATCTTCTAGACAACAAAACCA
GCTGGATGATTCTCATCAGCTCCGGGGTGGGGATGGCCATCGAGTACTGG
AAGGTGACCAAGGCCCTGCGCGTGGAGCTGGGGGGCGGGACGCTGCGCCT
GGTGCCCCGGGACTCCTAC back to top
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