mRNA_H-akashiwo_Contig1112.7.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 440 bits (1131), Expect = 1.400e-147 Identity = 223/235 (94.89%), Postives = 230/235 (97.87%), Query Frame = 1
Query: 1 VSKVLRSLDVNKSMGRDGVSPRVLKNCAGQLVAPLTCLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTLERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTLL 705
VSKVLRSLDVNKS+G DGVSPRVLK+CAGQLVAPLT LFQKIGKAAEFPTSWKVARVTPV+KKEDA+LPKNYRPISVLPTLATT ERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDF+GAF+KVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSI+SGVPQGAIW PLLFDLFVRN PQRVREALCLFYADDLTLL
Sbjct: 316 VSKVLRSLDVNKSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVHKKEDANLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYADDLTLL 550
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 359 bits (922), Expect = 2.460e-118 Identity = 190/235 (80.85%), Postives = 205/235 (87.23%), Query Frame = 1
Query: 1 VSKVLRSLDVNKSMGRDGVSPRVLKNCAGQLVAPLTCLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTLERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTLL 705
VSKVLRSLDVNKS+G DGVSPRVLK+CAGQLVAPLT LFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATT ERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDF+GAF+KVWWRGLLAHLWAVGVRSKAYQLFESYL + + G+ ++ + + + Y + LFVRN QRVR+ALCLFY +DLTLL
Sbjct: 316 VSKVLRSLDVNKSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLVGQG--PLRGGEWADLRASQHQIRCATGSYLVPPPLFVRNVRQRVRKALCLFYVNDLTLL 548
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK) HSP 1 Score: 182 bits (462), Expect = 1.350e-53 Identity = 88/104 (84.62%), Postives = 95/104 (91.35%), Query Frame = 1
Query: 391 ARKDVRLVALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTL 702
ARKDVRLV LDFKGA +KVWWRGLLAHLWAVGVRSKA++L +SYLSDRALFVVANG S +SI+SGVPQGAIW PLLFDLF+RN PQRVREALCLFYADDLTL
Sbjct: 1 ARKDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTL 104
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: A0A7D9HJ13_PARCT (Reverse transcriptase domain-containing protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HJ13_PARCT) HSP 1 Score: 176 bits (447), Expect = 1.140e-50 Identity = 98/237 (41.35%), Postives = 141/237 (59.49%), Query Frame = 1
Query: 1 VSKVLRSLDVNKSMGRDGVSPRVLKNCAGQLVAPLTCLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTLERVLMPQLASFLIEHIPSNQF--GFLPDTGTLDVGVILADQISRALEARKDVRLVALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTLL 705
V +L +D+ K+ G DG+ R++K C+ + TCL + E+PT WK A VTPVYKK+D KNYRPIS+LP+++ E+++ +L FL+E N F GF P T++ + +I ALE K+VR+V LDF AF+KVW +GLL L ++GV+ F SYLSDR V+ GQ S +S+ +GVPQ ++ PLLF +++ ND + C YADD +LL
Sbjct: 50 VINLLYKVDITKASGHDGIGNRIIKLCSRGIAKTFTCLINTSLRIGEYPTEWKKANVTPVYKKDDHQYKKNYRPISLLPSISKIPEKIVFTRLYEFLLEIRFLNDFQSGFRPGDSTVNQLTYIVHKIYEALEMGKEVRMVFLDFSKAFDKVWHKGLLYKLKSLGVKDPLLSWFCSYLSDRKQRVIIEGQCSSWLSVEAGVPQVSVLGPLLFLIYI-NDISSNIVSDCFLYADDTSLL 285
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK) HSP 1 Score: 174 bits (442), Expect = 3.450e-49 Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 1
Query: 412 VALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTL 702
VALDFKGAF+KVWWRGLLAHLWAVGVRSKA++L +SYLSDRALFVVANG S +SI+SGVPQGAIW PLLFDLF+RN PQRVREALCLFYADDLTL
Sbjct: 1 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTL 97
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: A0A8J9YR33_BRALA (Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YR33_BRALA) HSP 1 Score: 158 bits (399), Expect = 1.050e-40 Identity = 90/237 (37.97%), Postives = 134/237 (56.54%), Query Frame = 1
Query: 1 VSKVLRSLDVNKSMGRDGVSPRVLKNCAGQLVAPLTCLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTLERVLMPQLASFLIEH--IPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTLL 705
V KVL LD++K+ G D + RVLK+ A +L PL LFQ + P WKVA V PV+KK P NYRPIS+L ++ +E ++ L + ++ I QFGF T D + + A + R++ RL+ LD AF++VW RGL+A L A+GV + FE+YL+DR L +G+ S I +GVPQG+I PLLF L++ + +++ + YADD +++
Sbjct: 339 VQKVLTKLDISKATGPDSIPARVLKHAAPELSRPLAKLFQLLLNKHHMPKQWKVAHVIPVHKKNSKHDPNNYRPISLLCIISKVMEAIINKALWQHIDKNSLISDKQFGFRAGHSTADALTYVTQHLHDAKDKRQESRLICLDISRAFDRVWHRGLIAKLKAIGVDGHVLKWFENYLADRELKATISGKTSTARLINAGVPQGSILGPLLFILYIDDLTEKLTNT-AMLYADDSSIM 574
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: UPI001E1CE63E (uncharacterized protein LOC123503780 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CE63E) HSP 1 Score: 155 bits (391), Expect = 3.950e-40 Identity = 92/218 (42.20%), Postives = 137/218 (62.84%), Query Frame = 1
Query: 58 SPRVLKN-CAGQLVAPLTCLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTLERVLMPQLASFLIEH--IPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTL 702
SP L N CA L PL+ +F + + + +P+ WKVA V PV+KK + ++ KNYRP+S+LP L+ LE ++ ++ L +H + S QFGF P + D+ ++L + S AL+A K +VALD +GAF+KVW GLLA L A GV LF YL +R L VV +GQ SE+ ++++GV QG+ PLL+++++ ND + ++ YADDLTL
Sbjct: 364 SPPPLPNICADLLAHPLSTIFNQCLRTSRWPSVWKVASVVPVHKKNERTVAKNYRPVSLLPVLSKVLESIVASRVTDHLEKHHLLCSRQFGFRPGSSAADLHLLLISEWSAALDAGKATAVVALDIEGAFDKVWPAGLLAKLRAAGVDGPLLLLFGDYLRERNLKVVIDGQESEQHAVKAGVLQGSCLGPLLWNIYI-NDLLHLIPSVR-GYADDLTL 579
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: UPI001E1DFDAE (uncharacterized protein LOC123533210 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFDAE) HSP 1 Score: 155 bits (392), Expect = 1.060e-39 Identity = 93/233 (39.91%), Postives = 134/233 (57.51%), Query Frame = 1
Query: 10 VLRSLDVNKSMGRDGVSPRVLKNCAGQLVAPLTCLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTLERVLMPQLASFLIEH--IPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTL 702
VL+SL VNK+ G DG+S R+L + +L PL LF + + P WK A V+ +YKK DA+LP NYRPIS+L T+ ER++ + + L + Q GF+P T++ V + D + +AL+ +VR+V D AF+KVW RGLL L G+ FE+YLS+R VV G S +++GVPQG+I PLLF +F+ + +R + LF ADD +L
Sbjct: 449 VLKSLKVNKAAGPDGISNRILFEASHELSFPLCDLFNASLQLSIVPNMWKEAHVSAIYKKGDATLPSNYRPISLLNTIEKVFERLIFKHVFNHLHDSRFFTPVQSGFIPGDSTVNQLVFIYDTLCKALDNGLEVRVVFFDISKAFDKVWHRGLLCKLKHAGITGPLLNWFENYLSNRRQRVVLPGVKSNWAYVKAGVPQGSILGPLLFLIFINDIVDEIRSCVNLF-ADDTSL 680
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: UPI001E1D5DCD (uncharacterized protein LOC123531125 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5DCD) HSP 1 Score: 154 bits (390), Expect = 1.430e-39 Identity = 93/236 (39.41%), Postives = 134/236 (56.78%), Query Frame = 1
Query: 1 VSKVLRSLDVNKSMGRDGVSPRVLKNCAGQLVAPLTCLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTLERVLMPQLASFLIEH--IPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTL 702
V+ + S+D +K+ G D VSPR L+ A L PL F + +++ FP+ WK+A VTP++KK D SLP NYRPIS+L + +ER + + + LI H + NQ GF+ T++ L + I RAL+ K+VR V D AF++VW RG+L L +GVR Q SYLS R V S + +GVPQG+I PLLF +++ + Q + + LF ADD +L
Sbjct: 484 VADAVSSMDPSKASGPDLVSPRHLREGAPALAQPLATFFNTLLRSSNFPSQWKLANVTPIFKKSDPSLPSNYRPISLLSCIGKLMERCVHKHIYNHLIMHNLLTPNQSGFVKGDSTINQLSYLYNDICRALDEGKEVRAVFCDISKAFDRVWHRGVLYKLSRLGVRGSLLQWLSSYLSSRRQRVQYRNFSSSWSHVSAGVPQGSILGPLLFLVYINDIVQEIGCKIKLF-ADDTSL 718
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Match: UPI001E1D1C75 (uncharacterized protein LOC123507079 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D1C75) HSP 1 Score: 153 bits (386), Expect = 7.060e-39 Identity = 90/236 (38.14%), Postives = 134/236 (56.78%), Query Frame = 1
Query: 1 VSKVLRSLDVNKSMGRDGVSPRVLKNCAGQLVAPLTCLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTLERVLMPQLASFLIEH--IPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFKGAFNKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIRSGVPQGAIWYPLLFDLFVRNDPQRVREALCLFYADDLTL 702
V +L+SLD NK++G +SP VL+ CA +L PLT LF + +P WK + V P++KK + KNYRP+S+LP L+ LE ++ ++ L H + + QFGF D+ ++L+ + S AL+ K +VALD + AF++VW L+ L AV V L E+YL R L V+ NG+ S+ IR+GVPQG+ PLL++ V +A +ADD+TL
Sbjct: 749 VRAILKSLDENKAVGPQDISPHVLRQCAAELARPLTSLFNHCLATSTWPEMWKGSSVVPLHKKNSKAEAKNYRPVSLLPVLSKVLETIVASRVTQHLERHHLLSNRQFGFRQGRSVADLHLLLSTKWSEALDRGKATAVVALDIEAAFDRVWHAALITKLRAVKVDGALLHLLENYLRARHLKVIINGRESKPQPIRAGVPQGSCLGPLLWN---------VSKA----FADDITL 971 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1112.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1112.7.1 >prot_H-akashiwo_Contig1112.7.1 ID=prot_H-akashiwo_Contig1112.7.1|Name=mRNA_H-akashiwo_Contig1112.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=235bp VSKVLRSLDVNKSMGRDGVSPRVLKNCAGQLVAPLTCLFQKIGKAAEFPTback to top mRNA from alignment at H-akashiwo_Contig1112:354677..355381- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1112.7.1 ID=mRNA_H-akashiwo_Contig1112.7.1|Name=mRNA_H-akashiwo_Contig1112.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=705bp|location=Sequence derived from alignment at H-akashiwo_Contig1112:354677..355381- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1112:354677..355381- >mRNA_H-akashiwo_Contig1112.7.1 ID=mRNA_H-akashiwo_Contig1112.7.1|Name=mRNA_H-akashiwo_Contig1112.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=705bp|location=Sequence derived from alignment at H-akashiwo_Contig1112:354677..355381- (Heterosigma akashiwo CCMP452)back to top |