mRNA_H-akashiwo_Contig1111.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A7S4DE18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE18_HETAK) HSP 1 Score: 846 bits (2185), Expect = 1.870e-291 Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 1
Query: 1 PRGGAPGVFGFRYEHLKMLLPPAGGDSFPMARFAHDLATGQLLPATREGLAISKLVGFEKPGGGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGLPADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLVDLTDNQRAQIHLPIRLGGFGLLSPHFTHIAGYFGSFVGCLQDVWQR 1248
PRGGAPGVFGFRYEHLKMLLPPAGGDSFPMARFAHDLATGQLLPATREGLAISKLVGFEKPGGGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGLPADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLVDLTDNQRAQIHLPIRLGGFGLLSPHFTHIAGYFGSFVGCLQDVWQR
Sbjct: 938 PRGGAPGVFGFRYEHLKMLLPPAGGDSFPMARFAHDLATGQLLPATREGLAISKLVGFEKPGGGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGLPADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLVDLTDNQRAQIHLPIRLGGFGLLSPHFTHIAGYFGSFVGCLQDVWQR 1353
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A7S3Y7Z7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7Z7_HETAK) HSP 1 Score: 769 bits (1985), Expect = 2.050e-266 Identity = 388/396 (97.98%), Postives = 390/396 (98.48%), Query Frame = 1
Query: 1 PRGGAPGVFGFRYEHLKMLLPPAGGDSFPMARFAHDLATGQLLPATREGLA-ISKLV-GFEKPG-GGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGLPADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLVDLTDNQRAQIHLPIRLGGFGLLS 1179
PRGGAPGVFGFRYEHLKMLLPPAGGDSFPMA FAHDLATGQLLPATR+GL ISKLV GFEKPG GGARPVAISS WRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGLPADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLVDL+DNQRAQIHLPIRLGGFGLLS
Sbjct: 938 PRGGAPGVFGFRYEHLKMLLPPAGGDSFPMAHFAHDLATGQLLPATRKGLLEISKLVVGFEKPGRGGARPVAISSIWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGLPADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLVDLSDNQRAQIHLPIRLGGFGLLS 1333
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A0G4GFY2_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GFY2_VITBC) HSP 1 Score: 222 bits (566), Expect = 2.270e-60 Identity = 158/442 (35.75%), Postives = 219/442 (49.55%), Query Frame = 1
Query: 1 PRGGAPGVFGFRYEHLKMLLPPA--GGDSFPMARFAHDLATGQLLPATREGLAISKLVGFEKPGGGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPD----PIC--LLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSH-----TLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPR-------PGALQDAGLPADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKE--LDDPQVAL----LILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLVDLTDNQRAQIHLPIRLGGFGLLSPHFTHIAGYFGSFVGCLQDVWQR 1248
PRG A G G+RYEHL++L+ A D+ P+ +F + G L P + LA ++L EKPGGG RP+AI RR V + LC +K + E P QFAVG AG EKL + AQT + D SPD P+ LL +D NAFN SRQ + L ++P +V + Q+Y PL + T+ SR+G QQGD G FLFCL +PAL R+ A DD L + S + + E A L + L KC A+ P P A+ G+ A S EGI+ L P GT AF++R ++++ + LL + ++D A+ L+LR +PR ++ R + S ++ HD HI L+ + R Q+ LPIRLGGFGL+S A Y GS + DVW R
Sbjct: 1376 PRGSAAGPTGWRYEHLQVLVGEAHTNADAVPVLKFVQRMLDGDLPPVVTKLLAAARLFALEKPGGGVRPIAIGDALRRWVTRALCLQHKLEFEEEFRPHQFAVGTSAGGEKLFRTAQTYIQTQDAASPDADGPPLTRTLLSLDCRNAFNEISRQRIVDELAAKHPAMVAFFWQFYGTAAPLWYTMEGGRVETVHSRQGVQQGDVAGPFLFCLAFQPALRRLQEGFPDALVGGFMDDGLGGMDESSVPSFLTAAEEAFRAINLVLRLDKCHAWSPHWRSAADVPTAITRRGVRA----STEGIILLSAPIGTPAFVERTVNEVVASHQRLLDAVVAFAVNDGDYAVQGANLLLRYCGSPRFLYWCRLLA-PSPSVLAAARAHDAAKVAAFAHIQRTGALSLSARRQVQLPIRLGGFGLVSSARVAPAAYLGSVAATVGDVWDR 1812
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A0G4G029_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G029_VITBC) HSP 1 Score: 184 bits (468), Expect = 1.650e-47 Identity = 142/433 (32.79%), Postives = 197/433 (45.50%), Query Frame = 1
Query: 1 PRGGAPGVFGFRYEHLKMLL----PPAGGDSFPMARFAHDLATGQLLPATREGLAISKLVGFEKPGGGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSH-----TLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGLPADLPVS-----YEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKELDDP--QVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLV-DLTDNQRAQIHLPIRLGGFGLLSPHFTHIAGYFGSFVGCLQDVWQR 1248
PRG A G G+RYEHL+ + A + P+ F + G + + L+ ++L K GG R +A+ RR V K +C K + E P QFAVG AG EK+ + QT + DS D L+ +D NAFNS Q + L ++P LV + Q+Y P L + T+ ++EGTQQGD G FLFCLGL PAL ++ A DDI + G RV +CC +P QD+ + AD+ S EGI LG P G +FI L+KI + LL I Q + L+LR A+PR+ + R +P S+ + +HD + + D D+ AQ+ LPIRLGGFGL+S A + GS DV R
Sbjct: 280 PRGSAAGPTGWRYEHLRACMGEGDASAEDSTVPLPSFVGRMLAGNMPDSCTTTLSAARLFALMKDNGGVRLIAVGDVLRRWVTKAVCMENKLAFEEDFSPLQFAVGTSAGGEKIFQACQTYMETRHDDS-DKRVLVTLDCKNAFNSSDGQAILDELGTKWPSLVDFFWQFYGSPAELWYRMEDGRIETILTQEGTQQGDAAGPFLFCLGLHPALVKLQGEFPDDFISAFMDDI------------------DGGLDETRVTRQECCM---KPRWQQDSDISADIAASGVKCSTEGITVLGCPLGGKSFIQHSLEKITSSHQPLLDAIVTFAQKGLQGSGLLLRYCASPRLNYWLRLLPRESDVSLAAAERHDAAIITAFRRMFRFPGDFPDSVSAQVQLPIRLGGFGLVSASTIARAAFLGSIGVTASDVSSR 690
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A0G4GGP3_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GGP3_VITBC) HSP 1 Score: 159 bits (401), Expect = 6.920e-41 Identity = 104/316 (32.91%), Postives = 157/316 (49.68%), Query Frame = 1
Query: 4 RGGAPGVFGFRYEHLKMLLPPAGGDSFPMARFAHDLATGQLLPATREGLAISKLVGFEKPG------GGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSH-----TLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCP--RPGALQDAGLPADLPVSYEGILHLGVPFGTDAFIDRELDKIAR 912
RG A G G+RYEHL+ + P+ + D+ + R L ++L+G EK GG RP+AI RR V + +C L++ + E+L P Q+AVGV +G EK + +T LG+ D + L +DA NAF++ SRQ + + +PEL + QWY + L F + T+ S +GTQQGD G + GL L R+ A A +D++ + ++ F+ E+G+ + KC + RPG + A +PA++ + EGIL LGVP GTDAFI + I R
Sbjct: 82 RGSAQGPTGWRYEHLRAIHDATS--HVPLTKLVDDIVQSNIPDHVRPILGSARLIGLEKTDDDGSLTGGVRPIAIGEVLRRWVTRAICFLHRERFGEALSPHQYAVGVSSGAEKCIAAIRTFLGSGAADEKRVV--LSLDAKNAFSTISRQAILEGVNDLFPELTDFFLQWYGASSDLWFAHYDGTVRTIASTQGTQQGDSGGPVWYVCGLHAVLRRLQAALPDCLVCAFADNVYIGRTEGRVEEAFRAAKTEMGSVDQILVDHKCVMWGEHFRPGMQRPASVPAEVALGEEGILVLGVPLGTDAFIAKHFAAIQR 393
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A0G4GRQ9_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GRQ9_9ALVE) HSP 1 Score: 160 bits (405), Expect = 1.880e-39 Identity = 135/452 (29.87%), Postives = 195/452 (43.14%), Query Frame = 1
Query: 1 PRGGAPGVFGFRYEHLKMLLPPAGGDSFPMARFAHDLATGQLLPATREGLAISKLVGFEKPGGGA--RPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKL--LKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHT-----LWSREGTQQGDPFGSFLFCLGLRPALDRILA--------RCSGARALASSDDILLAV------------RASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGL----PADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLVD---LTDNQRAQIHLPIRLGGFGLLSPHFTHIAGYFGSFVGCLQDVWQR 1248
P+G A GV G+RY+HL LP G + A LA G LA + K G RP+ + R V + + + + LGP QFAV AGTEKL ++ QT L P S +L +DA+NAFN+C RQ M + +P+L + + WY P+ LVF + + EG QQGD G FLFC+GL+P+LD + R G A DD + + ++V L ++GL + K + P L++ P + S G G GT + DK R + EL Q ++E DPQ A L+ R P++++LTR M + Q DR + ++ I+G+ + + R Q +LP GG GL+ T AG GS L V +R
Sbjct: 46 PKGSAQGVTGWRYKHLSYFLPRDGSVQARILHIATCLARGDAPVGFISLLAGGRCFALNKNARGTEVRPIVVGDVLRWWVTRAILLEFGIQFERHLGPLQFAVRTRAGTEKLFGIRCVQTYLQRS-PSS----AMLNLDASNAFNTCDRQVIMNQVYAHFPQLYSFFALWYRTPSDLVFRDQSGLLRRIICEEGVQQGDVVGPFLFCMGLKPSLDGLAMLGDLQAKHRGRGCFVGAFMDDASMVFPLCPFQQIPTDGHDDSILHAWRVDAARLQSFGLTLRPDKSSVHSPSWQGLRECPSAYPSPPGITPSLPGFRLCGAASGTTEYQSAHFDKKLREAWELSQAVEEYGDPQGAYLLFRFCVLPKLIYLTRIMG--DVITLGEWSQADRELGESWARIMGMTEQEWVYGEVRNQAYLPQYQGGLGLICFRATATAGLLGSCGATLSTVIER 490
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A0G4I9I0_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I9I0_9ALVE) HSP 1 Score: 148 bits (374), Expect = 2.400e-36 Identity = 125/444 (28.15%), Postives = 189/444 (42.57%), Query Frame = 1
Query: 1 PRGGAPGVFGFRYEHLKMLLPP----AGGDSFPMARFAHDLATGQLLPATREGLAISKLVGFEK--PGGGARPVAISSTWRRHVGKTLCGLYKG-PWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHT-----LWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASS------DDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGLPADLPVSYEGILHL----GVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTR----AMPLYSEQLVDHLVQHDRRVADTLTHILGLVD--LTDNQRAQIHLPIRLGGFGLLSPHFTHIAGYFGSFVGCLQDVWQR 1248
P+G A GV G+RYEHL LLPP A G + DL G+ P + LA + K G RP+ + RR + + + L KG P + LG Q+AV + G +L + T L D L++DA NAFN+ RQ M + +PE+ ++ +Y TP F T ++S EG QQGD G LFC+GL+P LDR+ R S+ DD+ L + L+ + EE ++ L++NL K + P ++ P P E + G G + + +++ + L ++ DPQ L+ R P++ L R A+P Q D ++ T LG+ + T +Q Q LP+ GG G+ G + CL DV +R
Sbjct: 19 PKGSAQGVMGWRYEHLSFLLPPDRTVARGRQAAVLSMGQDLVAGKASPEVLDLLACGRCFALRKNVDGSKIRPIMVGDVVRRWITRAVL-LEKGEPIEKHLGVRQYAVHIADGCARLYHMVWTALQLDKS-----AVFLRLDAQNAFNTADRQQIMDEVYTHFPEIYTFLMFFYGSRTPTFFQKDTGETKVIFSEEGVQQGDVMGPTLFCIGLKPVLDRLSERLREQHRSKSTFIGTFMDDVGLIFPSGGLSRAWAAAEEEFRSFNLKLNLGKDKSLAFSPAWVETERYPETSPAGLELLKDRFKLGGGAIGKWEYEKKYFEEVRDEAVGLAFKVANYRDPQEGWLLFRFCVLPKLGFLLRLMTDAIPTSMWQAADDML------LKKCTQGLGIAENEWTLHQTVQASLPLSQGGLGIHRYSLMQKCALVGCYASCLADVLKR 450
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A1Q9DL84_SYMMI (132 kDa protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DL84_SYMMI) HSP 1 Score: 151 bits (382), Expect = 3.740e-36 Identity = 134/417 (32.13%), Postives = 179/417 (42.93%), Query Frame = 1
Query: 1 PRGGAPGVFGFRYEHLKMLLPPAGGDSF--PMARFAHDLATGQLLPATREGLAISKLVGFEKPGGGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKC--CAYCPRPGALQDAGLPADLPVSYEG---ILH----LGVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAA-PRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGLVDLTDNQRAQIHLPIRLGGFGLLSPHFTHIAGYFGS 1215
P APG G R +HL+ +SF +A LA G+ LA + LV KP GG RP+A+ +RR GK L L + P Q V V G EK + + A L+++D TNAFN SR+ ++ ++P L + Y PT L FG L S G QQGDP G LF L+P L L S A+ DD +LA + +A+ V A GL +NL KC P P A A PA+L +G +LH LG G+D+++ + + ELL I EL+DPQVA+ +LR A R+VH R P + + L D V G + T Q Q L + G GL S A Y S
Sbjct: 433 PAETAPGPTGLRVQHLRDACTAGSRESFLTQLAAVVQLLAQGRAPSFVAPVLAGAGLVALPKPSGGVRPIAVGEIFRRLTGKCLMALVQQEARTHFWPAQVGVAVKGGAEKAVHAVRA--WAQRHAGSATKALVKLDFTNAFNCISREAVLQQACTDFPALARWSVWCYRQPTRLQFGERALDSSSGVQQGDPLGPLLFSAALQP-LAADLRSSSLDIAVHFLDDGVLAGELADVASALVRVQRRAAAIGLTLNLGKCEVVVLGPVPSAALAASFPAELLQRSDGSSRVLHDFEFLGAAVGSDSYVHNHTEARVARAAELLDAIAELEDPQVAMRLLRACAGYARVVHSMRCNPPLYQHMA--LQAFDTMVRSCFAGFTG-IHPTAEQWRQAELGLAQAGLGLRSAAVHAPAAYLAS 843
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A0G4I4T6_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I4T6_9ALVE) HSP 1 Score: 150 bits (380), Expect = 4.920e-36 Identity = 126/441 (28.57%), Postives = 192/441 (43.54%), Query Frame = 1
Query: 1 PRGGAPGVFGFRYEHLKMLLPPAG----GDSFPMARFAHDLATGQLLPATREGLAISKLVGFEK--PGGGARPVAISSTWRRHVGKTLCGLYKGPWAES-LGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSHT-----LWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASS------DDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQDAGLP----ADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQH-DRRVADTLTHILGLVD--LTDNQRAQIHLPIRLGGFGLLSPHFTHIAGYFGSFVGCLQDVWQR 1248
P+G A GV G+RYEHL LLPP G G + DL G+ P + LA + K G RP+ + RR + + + L KG E LG Q+AV G +L + +T L D L++DA NAFN+ RQ M + +PE+ ++ +Y PTP F T ++ EG QQGD G LFC+GL+P LDR+ R S+ DD+ L + L+ + EE ++ L++NL K + P ++ P A L +S +G G G + + +++ + L ++ DPQ L+ R P++ L R M ++ + + Q D + T LG+ + T +Q Q LP+ GG G+ G + CL DV +R
Sbjct: 356 PKGLAQGVTGWRYEHLSFLLPPDGTAARGRQAAVLSMGQDLVAGKAPPEVLDLLACGRCFALRKNVDGSKIRPITVGDVVRRWITRAVL-LKKGEQIEKHLGVRQYAVRTADGCARLYHMVRTALQLDKS-----AVFLRLDAQNAFNTADRQQIMDEVYTHFPEIYTFLMFFYGSPTPTFFQKDTGETKVIFLEEGVQQGDVMGPALFCIGLKPVLDRLSDRLREQHRSKSTFIGAFMDDVGLIFPSGGLSRAWAAAEEEFRSFNLKLNLGKDKSLAFSPAWVEIERCPETSRAGLELSKDGFKLGGGAIGKWEYEKKHFEEVRDEAVGLASKVANYHDPQGGWLLFRFCILPKLGFLLRLM---ADAIAISMWQAADDMLLKKCTRGLGIAENEWTLHQTVQASLPLSQGGLGIHRYSLMQKCALVGCYASCLADVLKR 787
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Match: A0A0G4GU28_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GU28_VITBC) HSP 1 Score: 143 bits (360), Expect = 1.610e-35 Identity = 101/288 (35.07%), Postives = 136/288 (47.22%), Query Frame = 1
Query: 118 GQLLPATREGLAISKLVGFEKPGGGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTIL------GADDPDSPDPICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVFGSH-----TLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALASSDDILLAVRASQLAAVFQVVVEELGAYGLRVNLAKCCAYCPRPGALQD---AGLPADLPVSYEGILHLGVPFGTDAFIDRELDKIARTSCELLQEI 939
G L P LA ++L EKPGGG RP+AI RR V + LC +K + E P QFAVG AG EKL + AQT + G D P LL +D NAFN RQ + L ++ +V + Q+Y L + T+ SR+G QQGD G FLFCL +PAL R+ + A DD L + + + E A L + L KC A+ P + D A + + S EGI+ L P GT AFI+R ++K+ LL +
Sbjct: 4 GDLPPLVTRLLAAARLFALEKPGGGVRPIAIGDVLRRWVTRALCMQHKLDFEEEFRPPQFAVGTSAGGEKLFRAAQTYIQTQDAVGQDADGRPITRTLLSLDCRNAFNEIGRQHIIDELAVKHLAMVAFFWQFYGIAALLWYTMEDGRVETIHSRQGVQQGDAAGPFLFCLAFQPALRRLQEQFPAALVGGFMDDGLRGMDERDVPSFLTAADAEFRAINLVLRLDKCHAWSPHWRSAADLPTATISRGVRASTEGIILLSAPIGTPAFIERTVNKVVAKHQRLLDAV 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1111.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1111.5.1 >prot_H-akashiwo_Contig1111.5.1 ID=prot_H-akashiwo_Contig1111.5.1|Name=mRNA_H-akashiwo_Contig1111.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=416bp PRGGAPGVFGFRYEHLKMLLPPAGGDSFPMARFAHDLATGQLLPATREGLback to top mRNA from alignment at H-akashiwo_Contig1111:125410..126657- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1111.5.1 ID=mRNA_H-akashiwo_Contig1111.5.1|Name=mRNA_H-akashiwo_Contig1111.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1248bp|location=Sequence derived from alignment at H-akashiwo_Contig1111:125410..126657- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1111:125410..126657- >mRNA_H-akashiwo_Contig1111.5.1 ID=mRNA_H-akashiwo_Contig1111.5.1|Name=mRNA_H-akashiwo_Contig1111.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1248bp|location=Sequence derived from alignment at H-akashiwo_Contig1111:125410..126657- (Heterosigma akashiwo CCMP452)back to top |