mRNA_H-akashiwo_Contig111.17.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: L1IWP6_GUITC (Cysteine dioxygenase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IWP6_GUITC) HSP 1 Score: 345 bits (884), Expect = 2.040e-114 Identity = 153/294 (52.04%), Postives = 210/294 (71.43%), Query Frame = 1
Query: 1 RRKLCSMGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRRYPPTPPRTRP--LKHMKIFAETGEV 876
+RKLCS+GTGE++ V ++++ P K EFER Q LAH YH ++GI+DV+VCHP CGEVCF++TFL+K D+E FQ GPERDA AL+ + PSF SG LMP + LL +LK N+ G+N+ HD V++ + KW+PR+ EYE+Y++WDP+DP KYTRNLVF NEHMDV+LMCWPP ++S+IH H+ SSCWVV VEG+VHE+QY VP D++F+ ++++PTGA GR +LR I L +++YAN++I +HR+ENR P L+ MKIF ++GEV
Sbjct: 12 KRKLCSLGTGEVVHVLNFRAHPDKTQEFERIAQRLAHCFYHMESGISDVRVCHPKCGEVCFVLTFLSKSDLERFQAGPERDATEALKSCIEGGIPSFAVSGTLMPDTHTFSSLLTFLKANIKGSNYNAHDCEVVKREMAKWFPRKEEYERYVYWDPADPTKYTRNLVFANEHMDVLLMCWPPHSKSAIHGHEDSSCWVVLVEGEVHEIQYNVPKLDKKFIETQMKNPTGAIGRCSKLRVIHEVKLSEDGLTNTYANDDIAVHRIENRSDRPAFTLHVYAPGLRKMKIFKDSGEV 305
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A6U2F8D9_HEMAN (Cysteine dioxygenase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2F8D9_HEMAN) HSP 1 Score: 338 bits (867), Expect = 8.160e-112 Identity = 160/294 (54.42%), Postives = 202/294 (68.71%), Query Frame = 1
Query: 1 RRKLCSMGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRRYPPTPPRTRP--LKHMKIFAETGEV 876
+RKLC +GTGE++ V Y++ ++EFER VQ AH LYH QAGI+DV+VCHP C DME F++GPE+DA RAL +V EP++ TSGCLMPAA +L LL +LK+++ GTN ++H V V++ L KW+PRR EYEKYIHWD DP KYTRNLVF N+ MDV+LMCWPPG S+IH HD SSCWV VEG+V EVQY +P D QF+ +E+++PTGA GR RLR IG L S +YAN+EIG+HR+ENR P L+ MKIF ETG+V
Sbjct: 7 KRKLCELGTGEVVHVISYRAKEGMVEEFERIVQETAHCLYHLQAGISDVRVCHPKCXXXXXXXXXXXXXDMEKFKDGPEQDAARALGPVVEKGEPTYATSGCLMPAAHTLPSLLAFLKRSISGTNFSQHKVGKVREELSKWFPRREEYEKYIHWDQQDPKKYTRNLVFANDAMDVLLMCWPPGCVSAIHSHDESSCWVALVEGEVFEVQYTMPKMDIQFIEKEMKNPTGAVGRCTRLRVIGETRLSQSSASGAYANDEIGVHRIENRSSQPAFTLHVYAPGLRKMKIFKETGQV 300
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7S2CQ95_9STRA (Cysteine dioxygenase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQ95_9STRA) HSP 1 Score: 326 bits (835), Expect = 5.500e-107 Identity = 158/301 (52.49%), Postives = 199/301 (66.11%), Query Frame = 1
Query: 4 RKLCSMGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVV-----NAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRR--------YPPTPPRTRPLKHMKIFAET 867
R LCS+GTGE + + YKS P +DEFE VQ A Y ++ +TDV+VCHPCCGEV FIITF++ E +E F+ GP+R L GL+ + P+F G LMPA +L L++YLK NVHGT+H EHDVR+V K +EKW+PR EY+K+I P +P KYTRNL+F NEH D ILMCWP GA SSIHDH+ SSCWVVAVEG VHEVQ+A+P D++F+ E P A G G+L+ + A L+ G + +YANNEIG+HRVENR Y P PLK M+IF ET
Sbjct: 36 RHLCSLGTGEQVHMMFYKSKPGNVDEFEARVQCAARCFYKMESSVTDVRVCHPCCGEVVFIITFVSLEGLEKFKAGPQRCFESKLAGLLALDPNGDGSPAFSKCGSLMPACHTLDSLVEYLKLNVHGTDHREHDVRSVSKEMEKWFPRESEYKKHITLCPDNPTKYTRNLIFGNEHFDCILMCWPAGAVSSIHDHEESSCWVVAVEGTVHEVQFAMPMLDKKFLQTEKNDPANAVGTCGKLKIVNVAELDTGGVTGTYANNEIGIHRVENRTDSLACTLHVYAP------PLKKMRIFDET 330
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7R9UQQ6_DIALT (Cysteine dioxygenase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQQ6_DIALT) HSP 1 Score: 274 bits (700), Expect = 5.300e-86 Identity = 139/294 (47.28%), Postives = 180/294 (61.22%), Query Frame = 1
Query: 4 RKLCSMGTGEIILVEHYKSLP-AKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAAL-EPGVCSSSYANNEIGLHRVENRRRYPPTPPRTR--PLKHMKIFAETGE 873
RKLCSMGTGE++ + Y++ I +FER VQ +A SL+ +AG++DV+VCHP CGE F++T ++ + + F+ AL + + F SG LMP A SL LL L+ V G +H EHDV V+ + +W+PRR EY Y+HWD KYTRNLV + M+V+LMCWPPGARS IH HD SSCWV AVEG+VHEVQY +P DR+F + +PTGA GR G LR L + G + +YANN IGLHR+ENR P PL M IF E G+
Sbjct: 74 RKLCSMGTGEVVHILSYQAKDEVAIPDFERLVQCIARSLHEMEAGVSDVRVCHPRCGEATFVVTVVSAFESQRFEREIAPRVAAALRLVALEGSAVFSRSGTLMPRAHSLGSLLQKLQTLVRGRHHAEHDVSGVRAEVARWFPRREEYAPYVHWDEHSSSKYTRNLVHSSAEMEVLLMCWPPGARSLIHCHDESSCWVRAVEGEVHEVQYGMPTMDRKFFKDAMTNPTGAIGRCGPLRVQNVTPLGQGGSPTDTYANNNIGLHRIENRSDQPAITLHVYAPPLAKMTIFREAGD 367
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7S4B6X6_CHRCT (Cysteine dioxygenase n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B6X6_CHRCT) HSP 1 Score: 271 bits (694), Expect = 2.240e-83 Identity = 133/295 (45.08%), Postives = 183/295 (62.03%), Query Frame = 1
Query: 4 RKLCSMGTGEIILVEHYKSLPA-KIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNA-EPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALE-PGVCSSSYANNEIGLHRVENRRRYPPTP-----PRTRPLKHMKIFAE 864
RKLCS+GTGE++ V + + A +++ FE+ VQ +A L+ + G++DV+VCHP CGE F++T + + + + F+ A+ + PSF G LMP A SL LL +L++ V G +H+ HDV +++ ++KW+PR EYE Y+HWD P KYTRNL+ ++ M+V+LMCWP GA SSIH HD SSCWV AVEG+VHEVQYA P DR+F+ +LR P+GA GR G LR L S+SY N IG+HR+ENR P PR L+ MK F E
Sbjct: 223 RKLCSLGTGEVVHVLSFAAADATQVERFEQRVQRIAFELHRMEGGVSDVRVCHPKCGEATFVVTMVGRAESDRFERAVRPSIEAAMRDVASGGGAPSFAKVGSLMPQAHSLASLLAFLQQEVRGVHHSGHDVALIRREMDKWFPRMSEYESYVHWDEDSPSKYTRNLICSSDDMEVLLMCWPAGAASSIHCHDDSSCWVAAVEGEVHEVQYAFPTCDRKFLHEQLRKPSGAIGRCGALRVTNVTKLGGDDAPSTSYICNNIGVHRIENRSSQPAITMHVYAPR---LRRMKAFRE 514
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7S1NWT8_9EUGL (Cysteine dioxygenase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NWT8_9EUGL) HSP 1 Score: 225 bits (574), Expect = 2.010e-70 Identity = 103/165 (62.42%), Postives = 120/165 (72.73%), Query Frame = 1
Query: 193 FLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTG 687
FL + D+ FQ GPE+DA AL G++ P+F SGCLMP S + LL +LK N+ G +H HDV V LEKWYPRR EYEKYIHWD +P KYTRNLVF NEHMDV+LMCWPPG+RSSIH HD SSCWV VEG+V EV Y +P DR+FVA E+RSPTG
Sbjct: 1 FLDRADLVRFQRGPEKDALGALSGVLQQQGPAFAASGCLMPPTHSFESLLAFLKDNIKGRSHHCHDVDRVGAELEKWYPRRREYEKYIHWDRENPAKYTRNLVFSNEHMDVLLMCWPPGSRSSIHCHDESSCWVALVEGEVTEVHYKMPLVDRKFVALEMRSPTG 165
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: R1B838_EMIHU (Cysteine dioxygenase (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B838_EMIHU) HSP 1 Score: 229 bits (583), Expect = 1.040e-68 Identity = 128/305 (41.97%), Postives = 179/305 (58.69%), Query Frame = 1
Query: 19 MGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHT-EHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELR------SPTG-ATGRAGRLRQIGAAALE-PGV-----CSSSYANNEIGLHRVENRRRYPPTP-----PRTRPLKHMKIFAETGEV 876
+GTGE ++V +++ FER VQ L+ L +AG++DV+V GE F++T L++ + + F+ + AL + EP F + G L+P A +L LL L +++ GT+ T EHDVRAV L +WYPR+ EY ++ D DP +YTRN+V M+V++MCWPPG++S+IH HD SSCWV AVEG+VHEVQ+ +P DR+F R P G GR G LR+I + L PG C +YANNEIG+HR+ENR P PR L+ MKIF ++GEV
Sbjct: 61 IGTGETMVVLSFRAAAGMGAAFERVVQQLSLELDSVEAGVSDVRVMAGAGGEATFVVTLLSRAEAQRFERTIRPSIQTALAEVSEGGEPCFSSGGMLVPHAHTLGSLLQSLTRHLSGTSRTAEHDVRAVAAELRRWYPRKEEYGGFLSVDEDDPGRYTRNVVHSTPAMEVLMMCWPPGSQSTIHCHDESSCWVTAVEGEVHEVQFDLPLLDRKFERARARLEGAPADPAGHIRGRCGPLRRIRVSPLGGPGDGPELGCKQTYANNEIGIHRIENRSLEPAVTMHVYAPR---LRKMKIFRDSGEV 362
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7S4B6W7_CHRCT (Cysteine dioxygenase n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B6W7_CHRCT) HSP 1 Score: 197 bits (501), Expect = 4.930e-56 Identity = 86/197 (43.65%), Postives = 127/197 (64.47%), Query Frame = 1
Query: 4 RKLCSMGTGEIILVEHYKSLPA-KIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNA-EPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSC 588
RKLCS+GTGE++ V + + A +++ FE+ VQ +A L+ + G++DV+VCHP CGE F++T + + + + F+ A+ + PSF G LMP A SL LL +L++ V G +H+ HDV +++ ++KW+PR EYE Y+HWD P KYTRNL+ ++ M+V+LMCWP GA SSIH HD SSC
Sbjct: 223 RKLCSLGTGEVVHVLSFAAADATQVERFEQRVQRIAFELHRMEGGVSDVRVCHPKCGEATFVVTMVGRAESDRFERAVRPSIEAAMRDVASGGGAPSFAKVGSLMPQAHSLASLLAFLQQEVRGVHHSGHDVALIRREMDKWFPRMSEYESYVHWDEDSPSKYTRNLICSSDDMEVLLMCWPAGAASSIHCHDDSSC 419
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A8J2AWN2_9DINO (Cysteine dioxygenase n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2AWN2_9DINO) HSP 1 Score: 197 bits (502), Expect = 3.050e-55 Identity = 101/222 (45.50%), Postives = 136/222 (61.26%), Query Frame = 1
Query: 217 NFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRRYPP-TPPRTRP-LKHMKIFAETGEV 876
+F+ GP A G + SFQ +G LMP+ SL+ LL + + G N+ H+V+ V + ++W+PRR E+EKY+ WD +P KYTRNL+ +N++ D +LMCWPP +SSIH HD SSCWVVAV G+V EVQY +P FDRQF+ E R T A G+ L++I + YANNEI LHR+ENR P T P L+ +KIF E G+V
Sbjct: 275 SFRLGP-----MAGRGQFITTSSSFQATGALMPSTHSLQSLLQVFVQQIIGQNYRGHNVKEVAEECKRWFPRRHEWEKYVSWDEENPKKYTRNLIMKNDNFDCLLMCWPPHCQSSIHCHDRSSCWVVAVAGEVVEVQYQMPKFDRQFLEHESRDSTTAKGKCAPLKRIAETIIGFDAVRVGYANNEIALHRIENRTDQPAYTMHIYAPGLRKIKIFQEDGQV 491
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A8J2F525_9DINO (Cysteine dioxygenase n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2F525_9DINO) HSP 1 Score: 182 bits (461), Expect = 4.650e-48 Identity = 97/209 (46.41%), Postives = 125/209 (59.81%), Query Frame = 1
Query: 256 LEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRRYPP-TPPRTRP-LKHMKIFAETGEV 876
L G V SF+ +G LMPAA +LK LL L K + G +H H VR V + + W+PR E K++ W+ +P KYTRNL+++NE + +LMCWP + SSIH HD SSCWVVAV G+V EVQYA P DR+F+ E R+P A GR LR++ L YAN EI LHR+ENR P T P L+ ++IF E G V
Sbjct: 513 LGGRFVTNAYSFEATGSLMPAAHTLKSLLKKLVKMIKGRDHRSHPVRDVAEECKLWFPRDSEVAKFVSWNAENPSKYTRNLIYKNEAFECLLMCWPAHSVSSIHCHDESSCWVVAVGGEVVEVQYAQPKLDRKFLEAEARNPRQALGRCAPLRKLSETTLGFDAVRVGYANQEIALHRIENRTDEPAYTMHIYAPGLEKIRIFQECGTV 721 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig111.17.1 >prot_H-akashiwo_Contig111.17.1 ID=prot_H-akashiwo_Contig111.17.1|Name=mRNA_H-akashiwo_Contig111.17.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=328bp MGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCback to top mRNA from alignment at H-akashiwo_Contig111:1261981..1262982- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig111.17.1 ID=mRNA_H-akashiwo_Contig111.17.1|Name=mRNA_H-akashiwo_Contig111.17.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1002bp|location=Sequence derived from alignment at H-akashiwo_Contig111:1261981..1262982- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig111:1261981..1262982- >mRNA_H-akashiwo_Contig111.17.1 ID=mRNA_H-akashiwo_Contig111.17.1|Name=mRNA_H-akashiwo_Contig111.17.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=984bp|location=Sequence derived from alignment at H-akashiwo_Contig111:1261981..1262982- (Heterosigma akashiwo CCMP452)back to top |