mRNA_H-akashiwo_Contig111.17.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig111.17.1
Unique NamemRNA_H-akashiwo_Contig111.17.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: L1IWP6_GUITC (Cysteine dioxygenase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IWP6_GUITC)

HSP 1 Score: 345 bits (884), Expect = 2.040e-114
Identity = 153/294 (52.04%), Postives = 210/294 (71.43%), Query Frame = 1
Query:    1 RRKLCSMGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRRYPPTPPRTRP--LKHMKIFAETGEV 876
            +RKLCS+GTGE++ V ++++ P K  EFER  Q LAH  YH ++GI+DV+VCHP CGEVCF++TFL+K D+E FQ GPERDA  AL+  +    PSF  SG LMP   +   LL +LK N+ G+N+  HD   V++ + KW+PR+ EYE+Y++WDP+DP KYTRNLVF NEHMDV+LMCWPP ++S+IH H+ SSCWVV VEG+VHE+QY VP  D++F+  ++++PTGA GR  +LR I    L     +++YAN++I +HR+ENR   P          L+ MKIF ++GEV
Sbjct:   12 KRKLCSLGTGEVVHVLNFRAHPDKTQEFERIAQRLAHCFYHMESGISDVRVCHPKCGEVCFVLTFLSKSDLERFQAGPERDATEALKSCIEGGIPSFAVSGTLMPDTHTFSSLLTFLKANIKGSNYNAHDCEVVKREMAKWFPRKEEYERYVYWDPADPTKYTRNLVFANEHMDVLLMCWPPHSKSAIHGHEDSSCWVVLVEGEVHEIQYNVPKLDKKFIETQMKNPTGAIGRCSKLRVIHEVKLSEDGLTNTYANDDIAVHRIENRSDRPAFTLHVYAPGLRKMKIFKDSGEV 305          
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A6U2F8D9_HEMAN (Cysteine dioxygenase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2F8D9_HEMAN)

HSP 1 Score: 338 bits (867), Expect = 8.160e-112
Identity = 160/294 (54.42%), Postives = 202/294 (68.71%), Query Frame = 1
Query:    1 RRKLCSMGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRRYPPTPPRTRP--LKHMKIFAETGEV 876
            +RKLC +GTGE++ V  Y++    ++EFER VQ  AH LYH QAGI+DV+VCHP C             DME F++GPE+DA RAL  +V   EP++ TSGCLMPAA +L  LL +LK+++ GTN ++H V  V++ L KW+PRR EYEKYIHWD  DP KYTRNLVF N+ MDV+LMCWPPG  S+IH HD SSCWV  VEG+V EVQY +P  D QF+ +E+++PTGA GR  RLR IG   L     S +YAN+EIG+HR+ENR   P          L+ MKIF ETG+V
Sbjct:    7 KRKLCELGTGEVVHVISYRAKEGMVEEFERIVQETAHCLYHLQAGISDVRVCHPKCXXXXXXXXXXXXXDMEKFKDGPEQDAARALGPVVEKGEPTYATSGCLMPAAHTLPSLLAFLKRSISGTNFSQHKVGKVREELSKWFPRREEYEKYIHWDQQDPKKYTRNLVFANDAMDVLLMCWPPGCVSAIHSHDESSCWVALVEGEVFEVQYTMPKMDIQFIEKEMKNPTGAVGRCTRLRVIGETRLSQSSASGAYANDEIGVHRIENRSSQPAFTLHVYAPGLRKMKIFKETGQV 300          
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7S2CQ95_9STRA (Cysteine dioxygenase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQ95_9STRA)

HSP 1 Score: 326 bits (835), Expect = 5.500e-107
Identity = 158/301 (52.49%), Postives = 199/301 (66.11%), Query Frame = 1
Query:    4 RKLCSMGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVV-----NAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRR--------YPPTPPRTRPLKHMKIFAET 867
            R LCS+GTGE + +  YKS P  +DEFE  VQ  A   Y  ++ +TDV+VCHPCCGEV FIITF++ E +E F+ GP+R     L GL+      +  P+F   G LMPA  +L  L++YLK NVHGT+H EHDVR+V K +EKW+PR  EY+K+I   P +P KYTRNL+F NEH D ILMCWP GA SSIHDH+ SSCWVVAVEG VHEVQ+A+P  D++F+  E   P  A G  G+L+ +  A L+ G  + +YANNEIG+HRVENR          Y P      PLK M+IF ET
Sbjct:   36 RHLCSLGTGEQVHMMFYKSKPGNVDEFEARVQCAARCFYKMESSVTDVRVCHPCCGEVVFIITFVSLEGLEKFKAGPQRCFESKLAGLLALDPNGDGSPAFSKCGSLMPACHTLDSLVEYLKLNVHGTDHREHDVRSVSKEMEKWFPRESEYKKHITLCPDNPTKYTRNLIFGNEHFDCILMCWPAGAVSSIHDHEESSCWVVAVEGTVHEVQFAMPMLDKKFLQTEKNDPANAVGTCGKLKIVNVAELDTGGVTGTYANNEIGIHRVENRTDSLACTLHVYAP------PLKKMRIFDET 330          
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7R9UQQ6_DIALT (Cysteine dioxygenase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQQ6_DIALT)

HSP 1 Score: 274 bits (700), Expect = 5.300e-86
Identity = 139/294 (47.28%), Postives = 180/294 (61.22%), Query Frame = 1
Query:    4 RKLCSMGTGEIILVEHYKSLP-AKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAAL-EPGVCSSSYANNEIGLHRVENRRRYPPTPPRTR--PLKHMKIFAETGE 873
            RKLCSMGTGE++ +  Y++     I +FER VQ +A SL+  +AG++DV+VCHP CGE  F++T ++  + + F+         AL  + +     F  SG LMP A SL  LL  L+  V G +H EHDV  V+  + +W+PRR EY  Y+HWD     KYTRNLV  +  M+V+LMCWPPGARS IH HD SSCWV AVEG+VHEVQY +P  DR+F    + +PTGA GR G LR      L + G  + +YANN IGLHR+ENR   P         PL  M IF E G+
Sbjct:   74 RKLCSMGTGEVVHILSYQAKDEVAIPDFERLVQCIARSLHEMEAGVSDVRVCHPRCGEATFVVTVVSAFESQRFEREIAPRVAAALRLVALEGSAVFSRSGTLMPRAHSLGSLLQKLQTLVRGRHHAEHDVSGVRAEVARWFPRREEYAPYVHWDEHSSSKYTRNLVHSSAEMEVLLMCWPPGARSLIHCHDESSCWVRAVEGEVHEVQYGMPTMDRKFFKDAMTNPTGAIGRCGPLRVQNVTPLGQGGSPTDTYANNNIGLHRIENRSDQPAITLHVYAPPLAKMTIFREAGD 367          
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7S4B6X6_CHRCT (Cysteine dioxygenase n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B6X6_CHRCT)

HSP 1 Score: 271 bits (694), Expect = 2.240e-83
Identity = 133/295 (45.08%), Postives = 183/295 (62.03%), Query Frame = 1
Query:    4 RKLCSMGTGEIILVEHYKSLPA-KIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNA-EPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALE-PGVCSSSYANNEIGLHRVENRRRYPPTP-----PRTRPLKHMKIFAE 864
            RKLCS+GTGE++ V  + +  A +++ FE+ VQ +A  L+  + G++DV+VCHP CGE  F++T + + + + F+         A+  +      PSF   G LMP A SL  LL +L++ V G +H+ HDV  +++ ++KW+PR  EYE Y+HWD   P KYTRNL+  ++ M+V+LMCWP GA SSIH HD SSCWV AVEG+VHEVQYA P  DR+F+  +LR P+GA GR G LR      L      S+SY  N IG+HR+ENR   P        PR   L+ MK F E
Sbjct:  223 RKLCSLGTGEVVHVLSFAAADATQVERFEQRVQRIAFELHRMEGGVSDVRVCHPKCGEATFVVTMVGRAESDRFERAVRPSIEAAMRDVASGGGAPSFAKVGSLMPQAHSLASLLAFLQQEVRGVHHSGHDVALIRREMDKWFPRMSEYESYVHWDEDSPSKYTRNLICSSDDMEVLLMCWPAGAASSIHCHDDSSCWVAAVEGEVHEVQYAFPTCDRKFLHEQLRKPSGAIGRCGALRVTNVTKLGGDDAPSTSYICNNIGVHRIENRSSQPAITMHVYAPR---LRRMKAFRE 514          
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7S1NWT8_9EUGL (Cysteine dioxygenase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NWT8_9EUGL)

HSP 1 Score: 225 bits (574), Expect = 2.010e-70
Identity = 103/165 (62.42%), Postives = 120/165 (72.73%), Query Frame = 1
Query:  193 FLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTG 687
            FL + D+  FQ GPE+DA  AL G++    P+F  SGCLMP   S + LL +LK N+ G +H  HDV  V   LEKWYPRR EYEKYIHWD  +P KYTRNLVF NEHMDV+LMCWPPG+RSSIH HD SSCWV  VEG+V EV Y +P  DR+FVA E+RSPTG
Sbjct:    1 FLDRADLVRFQRGPEKDALGALSGVLQQQGPAFAASGCLMPPTHSFESLLAFLKDNIKGRSHHCHDVDRVGAELEKWYPRRREYEKYIHWDRENPAKYTRNLVFSNEHMDVLLMCWPPGSRSSIHCHDESSCWVALVEGEVTEVHYKMPLVDRKFVALEMRSPTG 165          
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: R1B838_EMIHU (Cysteine dioxygenase (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B838_EMIHU)

HSP 1 Score: 229 bits (583), Expect = 1.040e-68
Identity = 128/305 (41.97%), Postives = 179/305 (58.69%), Query Frame = 1
Query:   19 MGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHT-EHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELR------SPTG-ATGRAGRLRQIGAAALE-PGV-----CSSSYANNEIGLHRVENRRRYPPTP-----PRTRPLKHMKIFAETGEV 876
            +GTGE ++V  +++       FER VQ L+  L   +AG++DV+V     GE  F++T L++ + + F+       + AL  +    EP F + G L+P A +L  LL  L +++ GT+ T EHDVRAV   L +WYPR+ EY  ++  D  DP +YTRN+V     M+V++MCWPPG++S+IH HD SSCWV AVEG+VHEVQ+ +P  DR+F     R       P G   GR G LR+I  + L  PG      C  +YANNEIG+HR+ENR   P        PR   L+ MKIF ++GEV
Sbjct:   61 IGTGETMVVLSFRAAAGMGAAFERVVQQLSLELDSVEAGVSDVRVMAGAGGEATFVVTLLSRAEAQRFERTIRPSIQTALAEVSEGGEPCFSSGGMLVPHAHTLGSLLQSLTRHLSGTSRTAEHDVRAVAAELRRWYPRKEEYGGFLSVDEDDPGRYTRNVVHSTPAMEVLMMCWPPGSQSTIHCHDESSCWVTAVEGEVHEVQFDLPLLDRKFERARARLEGAPADPAGHIRGRCGPLRRIRVSPLGGPGDGPELGCKQTYANNEIGIHRIENRSLEPAVTMHVYAPR---LRKMKIFRDSGEV 362          
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A7S4B6W7_CHRCT (Cysteine dioxygenase n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B6W7_CHRCT)

HSP 1 Score: 197 bits (501), Expect = 4.930e-56
Identity = 86/197 (43.65%), Postives = 127/197 (64.47%), Query Frame = 1
Query:    4 RKLCSMGTGEIILVEHYKSLPA-KIDEFERTVQSLAHSLYHFQAGITDVKVCHPCCGEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNA-EPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSC 588
            RKLCS+GTGE++ V  + +  A +++ FE+ VQ +A  L+  + G++DV+VCHP CGE  F++T + + + + F+         A+  +      PSF   G LMP A SL  LL +L++ V G +H+ HDV  +++ ++KW+PR  EYE Y+HWD   P KYTRNL+  ++ M+V+LMCWP GA SSIH HD SSC
Sbjct:  223 RKLCSLGTGEVVHVLSFAAADATQVERFEQRVQRIAFELHRMEGGVSDVRVCHPKCGEATFVVTMVGRAESDRFERAVRPSIEAAMRDVASGGGAPSFAKVGSLMPQAHSLASLLAFLQQEVRGVHHSGHDVALIRREMDKWFPRMSEYESYVHWDEDSPSKYTRNLICSSDDMEVLLMCWPAGAASSIHCHDDSSC 419          
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A8J2AWN2_9DINO (Cysteine dioxygenase n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2AWN2_9DINO)

HSP 1 Score: 197 bits (502), Expect = 3.050e-55
Identity = 101/222 (45.50%), Postives = 136/222 (61.26%), Query Frame = 1
Query:  217 NFQNGPERDARRALEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRRYPP-TPPRTRP-LKHMKIFAETGEV 876
            +F+ GP      A  G  +    SFQ +G LMP+  SL+ LL    + + G N+  H+V+ V +  ++W+PRR E+EKY+ WD  +P KYTRNL+ +N++ D +LMCWPP  +SSIH HD SSCWVVAV G+V EVQY +P FDRQF+  E R  T A G+   L++I    +        YANNEI LHR+ENR   P  T     P L+ +KIF E G+V
Sbjct:  275 SFRLGP-----MAGRGQFITTSSSFQATGALMPSTHSLQSLLQVFVQQIIGQNYRGHNVKEVAEECKRWFPRRHEWEKYVSWDEENPKKYTRNLIMKNDNFDCLLMCWPPHCQSSIHCHDRSSCWVVAVAGEVVEVQYQMPKFDRQFLEHESRDSTTAKGKCAPLKRIAETIIGFDAVRVGYANNEIALHRIENRTDQPAYTMHIYAPGLRKIKIFQEDGQV 491          
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Match: A0A8J2F525_9DINO (Cysteine dioxygenase n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2F525_9DINO)

HSP 1 Score: 182 bits (461), Expect = 4.650e-48
Identity = 97/209 (46.41%), Postives = 125/209 (59.81%), Query Frame = 1
Query:  256 LEGLVVNAEPSFQTSGCLMPAAPSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDPSDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVHEVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYANNEIGLHRVENRRRYPP-TPPRTRP-LKHMKIFAETGEV 876
            L G  V    SF+ +G LMPAA +LK LL  L K + G +H  H VR V +  + W+PR  E  K++ W+  +P KYTRNL+++NE  + +LMCWP  + SSIH HD SSCWVVAV G+V EVQYA P  DR+F+  E R+P  A GR   LR++    L        YAN EI LHR+ENR   P  T     P L+ ++IF E G V
Sbjct:  513 LGGRFVTNAYSFEATGSLMPAAHTLKSLLKKLVKMIKGRDHRSHPVRDVAEECKLWFPRDSEVAKFVSWNAENPSKYTRNLIYKNEAFECLLMCWPAHSVSSIHCHDESSCWVVAVGGEVVEVQYAQPKLDRKFLEAEARNPRQALGRCAPLRKLSETTLGFDAVRVGYANQEIALHRIENRTDEPAYTMHIYAPGLEKIRIFQECGTV 721          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig111.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L1IWP6_GUITC2.040e-11452.04Cysteine dioxygenase n=1 Tax=Guillardia theta (str... [more]
A0A6U2F8D9_HEMAN8.160e-11254.42Cysteine dioxygenase n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2CQ95_9STRA5.500e-10752.49Cysteine dioxygenase n=1 Tax=Florenciella parvula ... [more]
A0A7R9UQQ6_DIALT5.300e-8647.28Cysteine dioxygenase n=2 Tax=Diacronema lutheri Ta... [more]
A0A7S4B6X6_CHRCT2.240e-8345.08Cysteine dioxygenase n=2 Tax=Chrysotila carterae T... [more]
A0A7S1NWT8_9EUGL2.010e-7062.42Cysteine dioxygenase (Fragment) n=1 Tax=Eutreptiel... [more]
R1B838_EMIHU1.040e-6841.97Cysteine dioxygenase (Fragment) n=2 Tax=Emiliania ... [more]
A0A7S4B6W7_CHRCT4.930e-5643.65Cysteine dioxygenase n=2 Tax=Chrysotila carterae T... [more]
A0A8J2AWN2_9DINO3.050e-5545.50Cysteine dioxygenase n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A8J2F525_9DINO4.650e-4846.41Cysteine dioxygenase n=1 Tax=Amoebophrya sp. A25 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig111contigH-akashiwo_Contig111:1261981..1262982 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog55529.EKX40269
Preferred nameCDO1
PFAMsCDO_I
Model size1003
Max annot lvl2759|Eukaryota
KEGG rclassRC00404
KEGG koko:K00456,ko:K05012,ko:K15711
KEGG TC2.A.49.1.1,2.A.49.1.2,2.A.49.1.3,2.A.49.2.2,2.A.49.2.3,2.A.49.2.8
KEGG ReactionR00893
KEGG Pathwayko00270,ko00430,ko01100,map00270,map00430,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000097,GO:0000098,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006090,GO:0006520,GO:0006534,GO:0006790,GO:0006805,GO:0006807,GO:0006810,GO:0006950,GO:0006952,GO:0006954,GO:0007275,GO:0007589,GO:0007595,GO:0008150,GO:0008152,GO:0008198,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009093,GO:0009410,GO:0009636,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0014070,GO:0014074,GO:0016020,GO:0016053,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017172,GO:0019448,GO:0019450,GO:0019451,GO:0019452,GO:0019530,GO:0019694,GO:0019752,GO:0030879,GO:0031960,GO:0032501,GO:0032502,GO:0032787,GO:0033762,GO:0033993,GO:0042221,GO:0042412,GO:0042493,GO:0043167,GO:0043169,GO:0043200,GO:0043434,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045471,GO:0046305,GO:0046394,GO:0046395,GO:0046439,GO:0046677,GO:0046683,GO:0046872,GO:0046903,GO:0046914,GO:0048513,GO:0048545,GO:0048731,GO:0048732,GO:0048856,GO:0050878,GO:0050896,GO:0051179,GO:0051213,GO:0051234,GO:0051384,GO:0051591,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0071944,GO:0097305,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901652,GO:1901698,GO:1901700
Exons1
Evalue6.6e-111
EggNOG OGsKOG4064@1|root,KOG4064@2759|Eukaryota
EC1.13.11.20,2.3.2.27
Descriptionalkanesulfonate biosynthetic process
Cds size984
COG categoryC
BiGG ReactioniRC1080.CRv4_Au5_s3_g10641_t1
BRITEko00000,ko00001,ko01000,ko03400,ko04040,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387085.0612392-CDS-H-akashiwo_Contig111:1261980..12629641681387085.0612392-CDS-H-akashiwo_Contig111:1261980..1262964Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig111 1261981..1262964 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387085.0761936-UTR-H-akashiwo_Contig111:1262964..12629821681387085.0761936-UTR-H-akashiwo_Contig111:1262964..1262982Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig111 1262965..1262982 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig111.17.1prot_H-akashiwo_Contig111.17.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig111 1261981..1262964 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig111.17.1

>prot_H-akashiwo_Contig111.17.1 ID=prot_H-akashiwo_Contig111.17.1|Name=mRNA_H-akashiwo_Contig111.17.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=328bp
MGTGEIILVEHYKSLPAKIDEFERTVQSLAHSLYHFQAGITDVKVCHPCC
GEVCFIITFLTKEDMENFQNGPERDARRALEGLVVNAEPSFQTSGCLMPA
APSLKCLLDYLKKNVHGTNHTEHDVRAVQKTLEKWYPRRCEYEKYIHWDP
SDPLKYTRNLVFRNEHMDVILMCWPPGARSSIHDHDSSSCWVVAVEGQVH
EVQYAVPCFDRQFVARELRSPTGATGRAGRLRQIGAAALEPGVCSSSYAN
NEIGLHRVENRRRYPPTPPRTRPLKHMKIFAETGEVRAGDGRGALPVRGR
RGRRGGGRARGRGGRCAGRGRLEPDQCR
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mRNA from alignment at H-akashiwo_Contig111:1261981..1262982-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig111.17.1 ID=mRNA_H-akashiwo_Contig111.17.1|Name=mRNA_H-akashiwo_Contig111.17.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1002bp|location=Sequence derived from alignment at H-akashiwo_Contig111:1261981..1262982- (Heterosigma akashiwo CCMP452)
CGCCGAAAGCTATGTTCCATGGGAACTGGAGAGATCATTCTCGTTGAACA CTACAAATCGCTGCCAGCAAAGATCGACGAATTCGAACGAACAGTCCAGA GTCTTGCACATTCTCTCTACCATTTTCAAGCGGGCATCACAGACGTGAAA GTTTGTCACCCATGCTGTGGGGAGGTGTGTTTCATCATCACATTTCTTAC TAAAGAAGACATGGAGAATTTTCAAAACGGACCTGAGCGAGATGCCCGGC GTGCTCTAGAGGGGCTCGTGGTGAATGCTGAACCGAGCTTCCAGACCAGC GGTTGCTTGATGCCCGCTGCTCCATCTTTGAAGTGCCTGCTTGATTACCT GAAAAAGAATGTCCACGGGACAAACCATACTGAGCATGACGTCAGGGCGG TGCAGAAAACACTTGAAAAGTGGTACCCCCGCCGCTGTGAGTACGAGAAG TACATCCACTGGGACCCCAGTGACCCGCTCAAGTACACCCGGAATCTGGT CTTCCGGAACGAGCACATGGACGTGATCCTGATGTGCTGGCCCCCGGGGG CGCGGTCGTCCATTCACGACCACGACAGCTCCTCCTGCTGGGTGGTGGCC GTGGAGGGCCAGGTGCACGAGGTGCAGTACGCCGTCCCCTGCTTCGACCG GCAGTTCGTGGCCCGCGAGCTGCGCAGCCCCACAGGCGCGACCGGCCGCG CGGGCCGGCTGCGCCAGATCGGCGCGGCCGCGCTCGAGCCCGGCGTCTGC TCCAGCAGCTACGCGAACAACGAGATCGGGCTGCACCGGGTGGAGAACCG TCGGCGCTACCCGCCTACACCTCCACGCACGCGCCCGCTGAAGCACATGA AGATCTTCGCGGAGACGGGCGAGGTGCGCGCAGGTGATGGCCGCGGTGCC CTTCCAGTCCGTGGGCGGCGAGGTCGGCGAGGGGGCGGGCGAGCCCGAGG ACGCGGCGGCCGGTGTGCTGGACGCGGCCGCCTGGAACCTGACCAGTGCC GG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig111:1261981..1262982-

>mRNA_H-akashiwo_Contig111.17.1 ID=mRNA_H-akashiwo_Contig111.17.1|Name=mRNA_H-akashiwo_Contig111.17.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=984bp|location=Sequence derived from alignment at H-akashiwo_Contig111:1261981..1262982- (Heterosigma akashiwo CCMP452)
ATGGGAACTGGAGAGATCATTCTCGTTGAACACTACAAATCGCTGCCAGC
AAAGATCGACGAATTCGAACGAACAGTCCAGAGTCTTGCACATTCTCTCT
ACCATTTTCAAGCGGGCATCACAGACGTGAAAGTTTGTCACCCATGCTGT
GGGGAGGTGTGTTTCATCATCACATTTCTTACTAAAGAAGACATGGAGAA
TTTTCAAAACGGACCTGAGCGAGATGCCCGGCGTGCTCTAGAGGGGCTCG
TGGTGAATGCTGAACCGAGCTTCCAGACCAGCGGTTGCTTGATGCCCGCT
GCTCCATCTTTGAAGTGCCTGCTTGATTACCTGAAAAAGAATGTCCACGG
GACAAACCATACTGAGCATGACGTCAGGGCGGTGCAGAAAACACTTGAAA
AGTGGTACCCCCGCCGCTGTGAGTACGAGAAGTACATCCACTGGGACCCC
AGTGACCCGCTCAAGTACACCCGGAATCTGGTCTTCCGGAACGAGCACAT
GGACGTGATCCTGATGTGCTGGCCCCCGGGGGCGCGGTCGTCCATTCACG
ACCACGACAGCTCCTCCTGCTGGGTGGTGGCCGTGGAGGGCCAGGTGCAC
GAGGTGCAGTACGCCGTCCCCTGCTTCGACCGGCAGTTCGTGGCCCGCGA
GCTGCGCAGCCCCACAGGCGCGACCGGCCGCGCGGGCCGGCTGCGCCAGA
TCGGCGCGGCCGCGCTCGAGCCCGGCGTCTGCTCCAGCAGCTACGCGAAC
AACGAGATCGGGCTGCACCGGGTGGAGAACCGTCGGCGCTACCCGCCTAC
ACCTCCACGCACGCGCCCGCTGAAGCACATGAAGATCTTCGCGGAGACGG
GCGAGGTGCGCGCAGGTGATGGCCGCGGTGCCCTTCCAGTCCGTGGGCGG
CGAGGTCGGCGAGGGGGCGGGCGAGCCCGAGGACGCGGCGGCCGGTGTGC
TGGACGCGGCCGCCTGGAACCTGACCAGTGCCGG
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