mRNA_H-akashiwo_Contig1107.11.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: A0A7S3XY31_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY31_HETAK) HSP 1 Score: 407 bits (1045), Expect = 1.690e-140 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1
Query: 100 MSLKLATFAAALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWNADRKKAIELNNGRAAQMGILGLAVHEMIDGNPYVLNSLLGAPVDFNAGF 720
MSLKLATFAAALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWNADRKKAIELNNGRAAQMGILGLAVHEMIDGNPYVLNSLLGAPVDFNAGF
Sbjct: 10 MSLKLATFAAALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWNADRKKAIELNNGRAAQMGILGLAVHEMIDGNPYVLNSLLGAPVDFNAGF 216
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: Q39969_HETAK (Fucoxanthin chlorophyll a /c binding protein n=3 Tax=Sar TaxID=2698737 RepID=Q39969_HETAK) HSP 1 Score: 309 bits (791), Expect = 5.070e-102 Identity = 156/210 (74.29%), Postives = 180/210 (85.71%), Query Frame = 1
Query: 100 MSLKLATFAAALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWN---ADRKKAIELNNGRAAQMGILGLAVHEMIDGNPYVLNSLLGAPVDFNAGF 720
MSLKLAT AAAL GASAFVAPN+MGVAKSSSA+KM FE+EIGVQAPLGFWDPLG+LD ADQ RFDRLRTVEIKHGRI+MLA+LGHLVTTAG R P YDLAG +++ +PTG+KAL+ LP AGV QTI FIG IE G+A+IK LEA+C+A+M + GW+ D K+AIELNNGRAAQMGIL L VHE +D NPY++NSLLG+PVDFNAGF
Sbjct: 1 MSLKLATLAAALMGASAFVAPNKMGVAKSSSALKMSFENEIGVQAPLGFWDPLGLLDEADQERFDRLRTVEIKHGRISMLAILGHLVTTAGVRLPGAYDLAGDQFSSLPTGLKALSALPAAGVAQTIGFIGLIELGFAQIKEELEADCEARMDAAGWDDEKKDSKRAIELNNGRAAQMGILALMVHEQLDNNPYIINSLLGSPVDFNAGF 210
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: A5JEM1_HETAK (Chloroplast chlorophyll a/c binding protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A5JEM1_HETAK) HSP 1 Score: 290 bits (743), Expect = 1.880e-94 Identity = 147/210 (70.00%), Postives = 173/210 (82.38%), Query Frame = 1
Query: 100 MSLKLATFAAALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWNA---DRKKAIELNNGRAAQMGILGLAVHEMIDGNPYVLNSLLGAPVDFNAGF 720
MSLKLATFAAALAGASAFVAPNQMGVAK+SSA+KM FE+E+GVQ PLGFWDPLG+L+ ADQ RFDRLR VEIKHGRI+MLA+LGH++TTAG R+P DL+G YA++P GIKAL LPFAGV Q + FIG IE G+++ + + A C+ KM GW+ D K+AIELNNGRAAQMGIL L VHE I+ +PYV+NSLLGAPVDFNAGF
Sbjct: 21 MSLKLATFAAALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETINNDPYVINSLLGAPVDFNAGF 230
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: A0A6T1KL06_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1KL06_9DINO) HSP 1 Score: 280 bits (716), Expect = 6.470e-91 Identity = 137/193 (70.98%), Postives = 161/193 (83.42%), Query Frame = 1
Query: 151 FVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWNA---DRKKAIELNNGRAAQMGILGLAVHEMIDGNPYVLNSLLGAPVDFNAGF 720
FVAPN MGVAKSSSA+KMGFE+EIGVQ PLGFWDPLG+L ADQ RFDRLRTVEIKHGRI+MLAVLGHLVT++G R P TY+LAG ++ +PTG+KALT LPFAGV Q I FIG +E G+ +I+ L+A+C+A M S GW+ D K+AIELNNGRAAQMGIL L VHE +D NPY++NSLLG+PVDFNAGF
Sbjct: 1 FVAPNTMGVAKSSSALKMGFENEIGVQPPLGFWDPLGLLAEADQERFDRLRTVEIKHGRISMLAVLGHLVTSSGVRLPGTYNLAGDEWTSLPTGLKALTALPFAGVAQVIAFIGLVELGFGQIEEDLKAKCEADMDSYGWDEAKKDSKRAIELNNGRAAQMGILALMVHEQLDNNPYIINSLLGSPVDFNAGF 193
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: A0A6T1L6B2_9DINO (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A6T1L6B2_9DINO) HSP 1 Score: 264 bits (675), Expect = 2.320e-84 Identity = 135/211 (63.98%), Postives = 159/211 (75.36%), Query Frame = 1
Query: 100 MSLKLATFAAALAGASAFVAPNQM-GVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWN---ADRKKAIELNNGRAAQMGILGLAVHEMIDGNPYVLNSLLGAPVDFNAGF 720
MSLK+AT AAAL GA+AF N M VAKSSSA+KMGFE EIG Q PLGFWDPL +L+G RF LR E+KHGR+A LAVLGH++TTAG R+P TYDLAGH ++ VPTG+KA +TLP G+ Q +FIG +E GY+ K + A C+ +M GW+ D K+AIELNNGRAA MGI GL HE+IDGNPYVLNSLLGAPVDFNAGF
Sbjct: 7 MSLKIATIAAALTGAAAFAPSNGMKNVAKSSSALKMGFEKEIGAQPPLGFWDPLKILEGESAERFAELREYEVKHGRVAQLAVLGHILTTAGARWPGTYDLAGHTWSSVPTGLKAFSTLPAGGLAQIFLFIGVMEMGYSVRKDEIAANCEERMTKAGWSDAKKDSKRAIELNNGRAAMMGIWGLVTHELIDGNPYVLNSLLGAPVDFNAGF 217
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: A0A6T1KN37_9DINO (Hypothetical protein n=5 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1KN37_9DINO) HSP 1 Score: 238 bits (608), Expect = 2.430e-73 Identity = 119/189 (62.96%), Postives = 147/189 (77.78%), Query Frame = 1
Query: 172 GVAKS-SSAVKMGFE--SEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWN---ADRKKAIELNNGRAAQMGILGLAVHEMIDGNPYVLNSLLGAPVDFNAGF 720
GV++S A + F+ +E+GVQAP+ FWDPLG D D+A F R R VEIKHGRI+MLA+LGHLVTTAG R P YDLAG +++ +PTG+KAL+ LP AGV QTI FIG IE G+A+IK LEA+C+A+M + GW+ D K+AIELNNGRAAQMGIL L VHE +D NPY++NSLLG+PVDFNAGF
Sbjct: 94 GVSRSRGKAARTAFDPTTELGVQAPVQFWDPLGFCDDGDEATFKRRRAVEIKHGRISMLAILGHLVTTAGVRLPGAYDLAGDQFSSLPTGLKALSALPAAGVAQTIGFIGLIELGFAQIKEELEADCEARMDAAGWDDEKKDSKRAIELNNGRAAQMGILALMVHEQLDNNPYIINSLLGSPVDFNAGF 282
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: A0A7S1UED2_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UED2_9STRA) HSP 1 Score: 232 bits (591), Expect = 4.170e-72 Identity = 120/186 (64.52%), Postives = 141/186 (75.81%), Query Frame = 1
Query: 118 TFA--AALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWNA---DRKKAIELNNGRAAQMGILGLAVHEMID 660
TFA A A ASAF AP + A++MGFESEIG Q PLGFWDPLG+L+ ADQ RFDRLRTVE KHGRI+MLA+LGHLVTTAG R P YDLAG YADVPTG+ A + LP AGV QT+ FIG IE G+A++K +EA+C+A+M S GW+A D K+AIELNNGRAAQMGIL + VHE +D
Sbjct: 4 TFAILALAASASAF-APKAFKATRGRQAMRMGFESEIGAQPPLGFWDPLGLLNDADQERFDRLRTVETKHGRISMLAILGHLVTTAGVRLPIAYDLAGDSYADVPTGLAAFSKLPAAGVAQTVAFIGLIELGFAQVKEDIEADCEARMDSAGWDAAKKDSKRAIELNNGRAAQMGILAMMVHEKLD 188
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: A0A7S1XV63_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XV63_9STRA) HSP 1 Score: 222 bits (565), Expect = 3.440e-68 Identity = 111/181 (61.33%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 127 AALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWNA---DRKKAIELNNGRAAQMGILGLAVHEMID 660
A +A ASAF AP + A++MGFESEIG Q PLGFWDPLG+L ADQ RFDRLR VE+KHGRI+MLA+LGHLVTTAG R PF YDL+G +ADVPTGI A + LP +G LQ + FIGA+E G+ +++ +E +C+A+M S GW A D K+AIELNNGRAAQMGIL + VHE +D
Sbjct: 9 ALVASASAF-APKAFKATRGRQAMRMGFESEIGAQPPLGFWDPLGLLKDADQDRFDRLRYVEVKHGRISMLAILGHLVTTAGARLPFNYDLSGDSFADVPTGIAAFSKLPLSGTLQIVFFIGALELGFLQVQDEIEDDCEARMDSQGWGAAKKDSKRAIELNNGRAAQMGILAMMVHEKLD 188
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: A0A7S1XXL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXL0_9STRA) HSP 1 Score: 218 bits (556), Expect = 9.170e-67 Identity = 112/190 (58.95%), Postives = 140/190 (73.68%), Query Frame = 1
Query: 118 TFAA-ALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWNA---DRKKAIELNNGRAAQMGILGLAVHEMIDGNPYV 675
TFA ALA +++ AP + SA++MGFESEIG Q PLGFWDPLG+L+ ADQ RFDRLRTVE KHGRI+MLA+LGHLVTTAG R P D G +AD+P+GI A +P AG++Q I F+G IEAG+ ++K +EA C+AKM G++A D K+AIELNNGRAAQMGIL + VHE +D NPY+
Sbjct: 4 TFAVLALAASASAFAPKAFKATRGRSAMRMGFESEIGAQPPLGFWDPLGLLNDADQERFDRLRTVETKHGRISMLAILGHLVTTAGVRIPGDIDFHGTAFADIPSGIAAFNKIPDAGLIQLIGFVGLIEAGFLQVKDEIEAGCEAKMDEQGFDAAMKDSKRAIELNNGRAAQMGILAMMVHEKLDNNPYM 193
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Match: A0A7S3XY30_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY30_HETAK) HSP 1 Score: 206 bits (525), Expect = 5.900e-63 Identity = 106/133 (79.70%), Postives = 118/133 (88.72%), Query Frame = 1
Query: 100 MSLKLATFAAALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAI 498
MSLKLATFAAAL GASAFVAPNQMGVAKSSSA+KM FE+EIGVQAPLGFWDPLG+L+ ADQ RFDRLRTVEIKHGRI+MLA+LGHLVTTAG R P YDLAG +++ +PTG+KAL+ LP AGV QTI FIG I
Sbjct: 1 MSLKLATFAAALMGASAFVAPNQMGVAKSSSALKMSFENEIGVQAPLGFWDPLGLLNEADQERFDRLRTVEIKHGRISMLAILGHLVTTAGVRLPGAYDLAGDQFSSLPTGLKALSALPAAGVAQTIGFIGLI 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1107.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1107.11.1 >prot_H-akashiwo_Contig1107.11.1 ID=prot_H-akashiwo_Contig1107.11.1|Name=mRNA_H-akashiwo_Contig1107.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=208bp MSLKLATFAAALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWback to top mRNA from alignment at H-akashiwo_Contig1107:337559..338680+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1107.11.1 ID=mRNA_H-akashiwo_Contig1107.11.1|Name=mRNA_H-akashiwo_Contig1107.11.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1122bp|location=Sequence derived from alignment at H-akashiwo_Contig1107:337559..338680+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1107:337559..338680+ >mRNA_H-akashiwo_Contig1107.11.1 ID=mRNA_H-akashiwo_Contig1107.11.1|Name=mRNA_H-akashiwo_Contig1107.11.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=624bp|location=Sequence derived from alignment at H-akashiwo_Contig1107:337559..338680+ (Heterosigma akashiwo CCMP452)back to top |