mRNA_H-akashiwo_Contig1105.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 207 bits (526), Expect = 2.320e-62 Identity = 97/169 (57.40%), Postives = 127/169 (75.15%), Query Frame = 1
Query: 151 PEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILRAYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
PE KHF A R F+YLKG+ ++S++LGG +LRA+ D+DF DR+DGKSVTGYI+FLGD+P+VW+S+LQ +VTT T EAEYLAL KD+MWLR LL E+G Q +PT V EDN+AC+ WA ++ V ++NRHFHV+YH +E V I + YI T +QV D+ TKAL
Sbjct: 167 PEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 335
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 169 bits (429), Expect = 6.720e-45 Identity = 86/181 (47.51%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 115 TLKKNYSVMTNYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILRAYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
TL K ++ P A AA+ + +YL + +K + LGG L AY DADF ++R G+S +G+ +FLG SP++W+SR+Q VT TTEAEY++L DVMWL+ LL +G+KQ + EDN ACI+WA + TV++ RH HV+YHY +E+VQ KEIEVKY++T Q+ D+FTK L
Sbjct: 806 TLSKRFTS----PSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPL 981
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 145 bits (365), Expect = 6.080e-38 Identity = 76/171 (44.44%), Postives = 105/171 (61.40%), Query Frame = 1
Query: 151 PEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
P +H+ AA ++ +YLKG+ N + GG L AY DAD+ +DR D +SV+G ++ L +PVVW + QK+V TTEAEY+AL C K+ MW R LL +G KQ TT++EDN I+ A + +H + YHY+RE + +IE+KYINT EQV D TK L
Sbjct: 205 PGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A6A4DK21_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DK21_9STRA) HSP 1 Score: 140 bits (354), Expect = 4.540e-37 Identity = 74/171 (43.27%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 151 PEAKHFAAAGRVFKYLKGSGNKSIKLGGGTI--LRAYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
P +H+ AA ++ +YLKG+ N + G L AY DAD+ +DR D +SV+G ++ L +PVVW + QK+V TTE EY+AL C K+ MW R LL +G KQ TT++EDN I+ A + +H + YHY+RE + +IE+KYINT EQV D TK L
Sbjct: 125 PGIRHWDAAIKIVRYLKGTRNYGVHFDGKMPPELIAYSDADWGSDRDDRRSVSGTVLMLFSAPVVWKTGFQKTVALSTTETEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 295
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A6A3JY23_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JY23_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.620e-36 Identity = 76/171 (44.44%), Postives = 105/171 (61.40%), Query Frame = 1
Query: 151 PEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
P +H+ AA ++ +YLKG+ N + GG L AY DAD+ +DR D +SV+G ++ L +PVVW + QK+V TTEAEY+AL C K+ MW R LL +G KQ TT++EDN I+ A + +H + YHY+RE + +IE+KYINT EQV D TK L
Sbjct: 777 PGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 947
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A507C9N9_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507C9N9_9FUNG) HSP 1 Score: 133 bits (334), Expect = 4.690e-35 Identity = 76/203 (37.44%), Postives = 114/203 (56.16%), Query Frame = 1
Query: 52 IYVDDIVIASNDDRTVAALKATLKKNYSVMTNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG-GTILRAYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
+YVDDI ++ V+ L K P ++A R+ +YL+G+ + + +GG L+AY DAD+ DR+D KS +G VF G +VW Q+ V T T EAEY+AL AKDV+W + LL E+G + +PTT+ EDN C A T T + +H + YH++R+LV +K + V+ T+E + D+ TK L
Sbjct: 5 VYVDDIAVS------VSILSQFCHK--------PSICDWSAVKRILRYLQGTKSLKLVIGGKDPSLKAYSDADWAGDRVDRKSRSGSAVFYGTGLIVWNCGKQECVATSTVEAEYIALANTAKDVLWSQQLLGELGRGRNEPTTILEDNNGCKQLAVHPTTTSRTKHIDIKYHFIRDLVVKKMVSVERCPTTEMIADILTKPL 193
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A401H607_9APHY (Transposon Ty5-1 protein n=4 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H607_9APHY) HSP 1 Score: 139 bits (349), Expect = 1.140e-34 Identity = 76/183 (41.53%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 133 SVMTNYPEAKHFAAAGRVFKYLKGSGNKSIKLG--------GGTILRAYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
S T P H+ AA RV +YL G+ I G +I Y DAD+ D D KS++GY+ LG+ + W+S+ Q +V + TTEAEY+A E AK+ +WLR L EIGF+Q PT + EDNTA IS A + K++HF V +HYVRE ++ K I++ Y T + + D+ TK+L
Sbjct: 357 SSFTANPGMAHWTAAKRVLRYLSGTRELGIIYGPIADVKPEDQSIFVGYSDADYANDIRDRKSISGYLFKLGNGTITWSSKKQTTVASSTTEAEYMASAEAAKEAVWLRTLFKEIGFEQQDPTILFEDNTAAISIARDPQFHAKSKHFDVKHHYVREKLRDKYIDIHYCPTEDMIADILTKSL 539
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A8J2KV46_9HEXA (Hypothetical protein (Fragment) n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2KV46_9HEXA) HSP 1 Score: 131 bits (330), Expect = 2.060e-34 Identity = 71/177 (40.11%), Postives = 102/177 (57.63%), Query Frame = 1
Query: 133 SVMTNYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILR--AYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
S N + H+ AA +V +YLKG+ N I+ G L+ Y D+D+ D+ + KS +G + FLG + WTSR Q V +TEAEY+AL A++ +WLR L E+G+ Q +PTT+ DN + I A + + +H V YHY R LV+ EI+V+Y T+ Q D TKAL
Sbjct: 45 SQFLNSYDKDHWKAAKQVLRYLKGTSNLGIRYNPGRTLKLTGYSDSDYAGDKTERKSTSGQVFFLGKQLISWTSRKQPCVAMSSTEAEYIALASAAREAIWLRRFLNELGYHQDQPTTIFVDNQSTIKLAKNPELHSRTKHIDVRYHYTRTLVEAGEIQVEYTPTTSQKADGLTKAL 221
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A182GEU4_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GEU4_AEDAL) HSP 1 Score: 131 bits (330), Expect = 3.620e-34 Identity = 79/199 (39.70%), Postives = 114/199 (57.29%), Query Frame = 1
Query: 73 IASNDDRTVAALKATLKKNYSVMT--NYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTI--LRAYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
+AS+ +A L + S T ++ EAK R+ +YL + + +KLGG L Y DAD+ D D KS +G++ LG + V WTSR Q VT T EAEY+AL E A++ +WLR LL E+ +Q KPT + EDN +C+ +A ++++H YHY RELV QK+IE++Y T E + D+ TK L
Sbjct: 41 LASHSRPDIAVSVGILSRKLSCPTELDWKEAK------RILRYLIFTRHYKLKLGGTAEWKLVGYSDADWAGDANDRKSCSGFLFGLGGATVSWTSRKQTCVTMSTMEAEYVALSEAAQEAVWLRGLLKELNEEQTKPTVIFEDNRSCLDFAVLDQQRKRSKHVDTRYHYTRELVTQKQIELRYCPTDEMLADVLTKPL 233
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Match: A0A401GH23_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GH23_9APHY) HSP 1 Score: 139 bits (349), Expect = 4.000e-34 Identity = 76/183 (41.53%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 133 SVMTNYPEAKHFAAAGRVFKYLKGSGNKSIKLG--------GGTILRAYCDADFFTDRIDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAEIGFKQIKPTTVNEDNTACISWATEITVTRKNRHFHVNYHYVRELVQQKEIEVKYINTSEQVGDLFTKAL 657
S T P H+ AA RV +YL G+ I G +I Y DAD+ D D KS++GY+ LG+ + W+S+ Q +V + TTEAEY+A E AK+ +WLR L EIGF+Q PT + EDNTA IS A + K++HF V +HYVRE ++ K I++ Y T + + D+ TK+L
Sbjct: 1764 SSFTANPGMAHWTAAKRVLRYLSGTRELGIIYGPIADVKPEDQSIFVGYSDADYANDIRDRKSISGYLFKLGNGTITWSSKKQTTVASSTTEAEYMASAEAAKEAVWLRTLFKEIGFEQQDPTILFEDNTAAISIARDPQFHAKSKHFDVKHHYVREKLRDKYIDIHYCPTEDMIADILTKSL 1946 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1105.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1105.3.1 >prot_H-akashiwo_Contig1105.3.1 ID=prot_H-akashiwo_Contig1105.3.1|Name=mRNA_H-akashiwo_Contig1105.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=214bp MIKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKNYSVMTNYPEAKHback to top mRNA from alignment at H-akashiwo_Contig1105:236915..237869- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1105.3.1 ID=mRNA_H-akashiwo_Contig1105.3.1|Name=mRNA_H-akashiwo_Contig1105.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=955bp|location=Sequence derived from alignment at H-akashiwo_Contig1105:236915..237869- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1105:236915..237869- >mRNA_H-akashiwo_Contig1105.3.1 ID=mRNA_H-akashiwo_Contig1105.3.1|Name=mRNA_H-akashiwo_Contig1105.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=642bp|location=Sequence derived from alignment at H-akashiwo_Contig1105:236915..237869- (Heterosigma akashiwo CCMP452)back to top |