mRNA_H-akashiwo_Contig1105.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: A0A6V1NT77_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NT77_HETAK) HSP 1 Score: 184 bits (467), Expect = 7.720e-58 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 279
MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN
Sbjct: 4 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 96
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: A0A7S2XZ74_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ74_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.620e-43 Identity = 71/93 (76.34%), Postives = 84/93 (90.32%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 279
MNT+WVR+NAVVFFG TVLL LA +C+FST+LHKGEP+IKYLG+NTIRS+++ G DR LISFD+DADL+ AFNWNIKQLFVFVVAEYAT+ N
Sbjct: 1 MNTIWVRLNAVVFFGFTVLLCLACMCSFSTFLHKGEPHIKYLGLNTIRSMRAQKGGDRVLISFDIDADLSGAFNWNIKQLFVFVVAEYATKTN 93
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: A0A835YJ42_9STRA (Signal peptidase 22kDa subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ42_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.520e-37 Identity = 65/93 (69.89%), Postives = 79/93 (84.95%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 279
MNTVWVR+NAVVFFGLTVLL LA++ A STYLH+G P +K L +N I+S +S VDRA+I+FDL+ADL PAFNWNIKQ+FVFVVAE+AT+ N
Sbjct: 1 MNTVWVRLNAVVFFGLTVLLGLALMTATSTYLHEGHPTVKTLRLNKIKSFRSQSKVDRAIINFDLEADLAPAFNWNIKQIFVFVVAEFATKTN 93
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: D7FLF7_ECTSI (Probable Spc3 homolog, subunit of Signal Peptidase Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF7_ECTSI) HSP 1 Score: 124 bits (310), Expect = 6.460e-35 Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 279
M+T WVRVNAVVFFGLTVLLVL+++ A STYLH+G P+++ LGV+ R+ + G DR L++ D+DADL PAFNWN+KQLF FVVAEY T N
Sbjct: 1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTN 93
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: A0A7S2SN40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN40_9STRA) HSP 1 Score: 122 bits (305), Expect = 4.210e-33 Identity = 60/93 (64.52%), Postives = 77/93 (82.80%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 279
M+TVWVR+NAVVFFGLTV++VLA++ FST H+G P + L +N+I +L++HG D A++SFDL ADL+PAFNWNIKQLFVFVVAEY T+ N
Sbjct: 1 MHTVWVRLNAVVFFGLTVIVVLAVLTWFSTVTHRGYPTVDTLQLNSIGTLRNHGERDIAILSFDLHADLSPAFNWNIKQLFVFVVAEYRTKTN 93
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: A0A7S2IIZ8_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2IIZ8_9STRA) HSP 1 Score: 121 bits (304), Expect = 7.820e-33 Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLH--KGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 279
M+TVWVR+NAVVFFGLTVLL L+I A S + H + +P ++ L +N +RSLKSHGGVDRAL+SFDL DLTPAF+WNIKQLFV+V+A Y T+KN
Sbjct: 24 MHTVWVRLNAVVFFGLTVLLGLSIAAAISKWGHASRHKPVVEKLKLNKLRSLKSHGGVDRALLSFDLHVDLTPAFHWNIKQLFVYVIATYETDKN 118
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: A0A7S4J3F9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3F9_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.190e-32 Identity = 62/95 (65.26%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGE--PNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 279
M+TVWVR+NAVVFFGLTVLL L+I+ A S H P++K L + T+RSLKSHGGVDRAL+SFD+D DL PAF+WNIKQLFV+VVA Y ++ N
Sbjct: 1 MHTVWVRLNAVVFFGLTVLLGLSILAALSKSGHSNRYRPDVKRLELKTLRSLKSHGGVDRALLSFDIDVDLRPAFHWNIKQLFVYVVASYESDTN 95
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: A0A448Z0X0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0X0_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.380e-32 Identity = 62/94 (65.96%), Postives = 78/94 (82.98%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFS----TYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYAT 270
M+TVWVR+NAVVFFGLTVLL L+ + AFS +Y+H +P I L +NT+RSLKSHGGVDRAL+SF++DAD+ PAF+WN+KQLFV+VVA Y T
Sbjct: 1 MHTVWVRLNAVVFFGLTVLLGLSCLAAFSKIGHSYIH--QPIINTLELNTLRSLKSHGGVDRALLSFNIDADMNPAFHWNVKQLFVYVVASYET 92
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: A0A7S2XM83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM83_9STRA) HSP 1 Score: 119 bits (297), Expect = 5.800e-32 Identity = 61/95 (64.21%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLH--KGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 279
M+TVWVR+NAVVFFGLTVLL L+++ A S H + +P + L +N +RSLKSHGGVDRAL+SFDL AD+ PAF+WNIKQLFV+VVA Y T+ N
Sbjct: 5 MHTVWVRLNAVVFFGLTVLLGLSVLAAISAIGHSTRHKPVVSKLSLNQLRSLKSHGGVDRALLSFDLHADMRPAFHWNIKQLFVYVVASYETDTN 99
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Match: B8CCG8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCG8_THAPS) HSP 1 Score: 118 bits (295), Expect = 9.610e-32 Identity = 60/95 (63.16%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 1 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLH--KGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKN 279
M+TVWVR+NAVVFFGLTVLL L+I+ A S H + +P I L +N +RS+K+HGGVDRAL+SFDL AD+ PAF+WNIKQ+FV+VVA Y T+ N
Sbjct: 1 MHTVWVRLNAVVFFGLTVLLCLSILAALSKIGHTRRYQPKIHKLALNNLRSVKNHGGVDRALLSFDLHADMNPAFHWNIKQIFVYVVATYKTDTN 95 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1105.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1105.2.1 >prot_H-akashiwo_Contig1105.2.1 ID=prot_H-akashiwo_Contig1105.2.1|Name=mRNA_H-akashiwo_Contig1105.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=93bp MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLback to top mRNA from alignment at H-akashiwo_Contig1105:169256..174074- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1105.2.1 ID=mRNA_H-akashiwo_Contig1105.2.1|Name=mRNA_H-akashiwo_Contig1105.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=4819bp|location=Sequence derived from alignment at H-akashiwo_Contig1105:169256..174074- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1105:169256..174074- >mRNA_H-akashiwo_Contig1105.2.1 ID=mRNA_H-akashiwo_Contig1105.2.1|Name=mRNA_H-akashiwo_Contig1105.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=279bp|location=Sequence derived from alignment at H-akashiwo_Contig1105:169256..174074- (Heterosigma akashiwo CCMP452)back to top |