mRNA_H-akashiwo_Contig1104.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: A0A7S3Y9R4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9R4_HETAK) HSP 1 Score: 152 bits (383), Expect = 3.350e-45 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFLHR 219
GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFLHR
Sbjct: 63 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFLHR 135
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: A0A8J5X9N8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X9N8_DIALT) HSP 1 Score: 92.8 bits (229), Expect = 9.290e-21 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFLH 216
G PAI+TVP+FW +YFP Y+++K + + D S+ VH+ +AVSAGFA +V+TNP+WVVRTRLQTQ LH
Sbjct: 85 GFAPAILTVPVFWSLYFPLYDRMKPAVAHVLRTDTRSSGVHMFSAVSAGFAINVLTNPLWVVRTRLQTQALH 156
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: A0A835Z5U5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U5_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.270e-18 Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFLH 216
GI PA++ VP+FWGIYF YE+ KR V + A H+++A+SAG ADV TNP WVVRTR+QTQ +H
Sbjct: 83 GITPALVIVPIFWGIYFGVYERAKRGFVSV-----TGAEQHVLSAISAGLVADVCTNPFWVVRTRMQTQAMH 149
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: A0A7S2Y0G8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G8_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.460e-18 Identity = 45/99 (45.45%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGI--------------------------GDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFLHR 219
G+ PA++TVPLFW IYFP YE++K RL G D+ A H ++AV AG ADVVTNP WV+RTRLQTQ LHR
Sbjct: 50 GLAPALLTVPLFWAIYFPSYERLKHRLEAAGHKHWQPQSTAQGVAQPLNKGSQPEQDEADEVLALAHCLSAVGAGCVADVVTNPFWVLRTRLQTQVLHR 148
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: F2TZA2_SALR5 (NAD+ transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZA2_SALR5) HSP 1 Score: 81.6 bits (200), Expect = 8.790e-17 Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFLH 216
G+ P+++T+PLFW IYFP Y + +RL M GD ++ H VAA++AGFAAD TNP+WVVRTR+ + H
Sbjct: 70 GLRPSLMTMPLFWAIYFPVYGAMNQRLALMSNGD-SATWQHCVAAITAGFAADCATNPLWVVRTRMISDIYH 140
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: A0A7S1XSX1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSX1_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.400e-16 Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLV-AAVSAGFAADVVTNPMWVVRTRLQTQFLH 216
G+ PA++TVP+FWG+YFP YE +K L G + + ++ AA+ AG D+ TNP+WVVRTR+QTQ LH
Sbjct: 135 GLTPALVTVPIFWGLYFPTYEGLKATLEARNPGRERLQTHEIILAAMGAGIIVDITTNPLWVVRTRMQTQHLH 207
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: A0A7S3STG0_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3STG0_9SPIT) HSP 1 Score: 81.3 bits (199), Expect = 1.500e-16 Identity = 38/71 (53.52%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFL 213
G+ P I +V +FW YFPCYE K + + S VHL AA SAG DVVTNP+WVVRTRL TQ L
Sbjct: 31 GLTPTICSVAIFWSCYFPCYEYAKTHIAEASGSTPESPRVHLAAAGSAGLITDVVTNPLWVVRTRLTTQAL 101
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: A0A7S3VXV9_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3VXV9_EMIHU) HSP 1 Score: 77.8 bits (190), Expect = 6.740e-16 Identity = 35/71 (49.30%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFL 213
G+ P++ +V +FW YFPCYE K + + S VHL AA AG DV+TNP WVVRTRL TQ L
Sbjct: 101 GLTPSLCSVGIFWACYFPCYEHAKSAIARGSGASGESPGVHLTAAGLAGLVTDVITNPFWVVRTRLTTQHL 171
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: B8BS39_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS39_THAPS) HSP 1 Score: 78.2 bits (191), Expect = 1.550e-15 Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGI-----GDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFLH 216
G+ + TVP FWG+YFP YE KR++++ G + A VHL +A++AG ADVV NPM+VVRTR+QT+ LH
Sbjct: 59 GLGATLATVPAFWGLYFPMYESFKRKILEWSSDYGDGGHNHHALVHLGSAITAGGLADVVCNPMFVVRTRMQTEALH 135
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Match: A0A7R9UD11_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD11_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.860e-15 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFAADVVTNPMWVVRTRLQTQFLH 216
G+ PA+ TVP+FWG+YFP YE +K L + G + + + + AA+ AG DV TNP+WVVRTR+QTQ LH
Sbjct: 139 GLGPALFTVPIFWGLYFPTYEALKSLLRRDG--QQLTTAEIVSAAIGAGAIVDVATNPLWVVRTRMQTQHLH 208 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1104.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1104.2.1 >prot_H-akashiwo_Contig1104.2.1 ID=prot_H-akashiwo_Contig1104.2.1|Name=mRNA_H-akashiwo_Contig1104.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=74bp GIIPAIITVPLFWGIYFPCYEKVKRRLVKMGIGDKNSASVHLVAAVSAGFback to top mRNA from alignment at H-akashiwo_Contig1104:103009..103498+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1104.2.1 ID=mRNA_H-akashiwo_Contig1104.2.1|Name=mRNA_H-akashiwo_Contig1104.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=490bp|location=Sequence derived from alignment at H-akashiwo_Contig1104:103009..103498+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1104:103009..103498+ >mRNA_H-akashiwo_Contig1104.2.1 ID=mRNA_H-akashiwo_Contig1104.2.1|Name=mRNA_H-akashiwo_Contig1104.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=222bp|location=Sequence derived from alignment at H-akashiwo_Contig1104:103009..103498+ (Heterosigma akashiwo CCMP452)back to top |