mRNA_H-akashiwo_Contig1103.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A7S2V0M0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0M0_9STRA) HSP 1 Score: 243 bits (620), Expect = 4.450e-77 Identity = 103/189 (54.50%), Postives = 139/189 (73.54%), Query Frame = 2
Query: 116 YKYEVDQCMGDDIKNHRTICCSDMEMPVMGGIDVVNLFFQEPDTMPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEKLGPFIDLSQWTVYNDRLYFFGGAGPKMKFLAAGDEVLELGNTNWGSYYD-GEVFDGHFDTNCFHRQTYEDLLAGKVTGD 679
Y++ +DQC GD+ K RT+CC D E V+GG+DVV ++ +P +GD+ A YLPTS+GFY+FLF +E N + F +DPW YAP WGG+C YG+ALE+K+Y +V+ LGPF+DLS W + RLYFFGG+G ++KF+ G + LG+ NWG+YYD G +DGHF+TNCFHRQTYEDL+ G VTG+
Sbjct: 48 YQFTIDQC-GDEYKEFRTLCCCDPEYAVLGGVDVVEMYNLYEFDLPKIGDEQYAAYLPTSSGFYRFLFINEENLETFKEDPWSYAPAWGGFCGYGVALEEKSYAADFVKTLGPFVDLSSWAIKGGRLYFFGGSGARLKFIVYGSHAVALGDENWGTYYDSGSHYDGHFNTNCFHRQTYEDLINGIVTGE 235
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A7S2V077_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V077_9STRA) HSP 1 Score: 223 bits (569), Expect = 1.800e-68 Identity = 101/188 (53.72%), Postives = 131/188 (69.68%), Query Frame = 2
Query: 122 YEVDQCMGDDIKNHRTICCSDMEMPVMGGIDVVNLFFQEPDTMPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEKLGPFIDLSQWTVY--NDRLYFFGGAGPKMKFLAAGDEVLELGNTNWGSYYDGEVFDGHFDTNCFHRQTYEDLLAGKVTGD 679
+EV+QCM D K+ R CC+D PV+GG+DVV L+ Q DTMP +GDD+I L T+ G Y F F S+ N D F+ DPW YAP WGG+C YG+A E+K+Y V++LGP++DLS WT+ + RLYFFGG GP+ KFLA + ++ GN NW YY G ++DGHFDTNCFHRQTY+DL+ T D
Sbjct: 92 FEVNQCMDID-KDLRGACCTDPSKPVLGGVDVVELYKQGEDTMPKIGDDNIGALLTTTAGEYLFNFISQENLDAFLADPWRYAPAWGGFCGYGVAFEEKSYKDDAVKRLGPYVDLSAWTISAGDGRLYFFGGGGPRGKFLAD-ERAVQYGNDNWSGYYAGNLYDGHFDTNCFHRQTYQDLINNIKTPD 277
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A7S3UX57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX57_HETAK) HSP 1 Score: 215 bits (548), Expect = 5.720e-60 Identity = 99/198 (50.00%), Postives = 134/198 (67.68%), Query Frame = 2
Query: 98 FVVSSAYKYEVDQCMGDDIKNHRTICCSDMEMPVMGGIDVVNLFFQEPDT-MPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEKLGPFIDLSQWTVYNDRLYFFGGAGPKMKFLAAGDEVLELGNTNWGSYYDGEVFDGHFDTNCFHRQTYEDLLAG--KVTGDA 682
FV SS + Y+ +QC D++K+ RT CCSD ++PV+GG+DVV LF D +P +GD S+A LPT G +KFLF +E NR F+ +PW YAP WGG+CA GI E + + T ++LGP +DLS WT+ N RLYFFGG GPK+KFL + + + G+ +W + + G V+DGHFDTNCFHRQ + D L G V+ D
Sbjct: 45 FVGSSMHMYKTEQCQEDELKSIRTTCCSDPDLPVLGGVDVVELFSYTDDKHIPGLGDPSLAAILPTRVGNFKFLFLTEENRAKFLVNPWQYAPAWGGFCAMGIPYESQYFTSTARDRLGPNVDLSTWTIVNGRLYFFGGEGPKLKFLQSLPDAISYGDAHWSNMFGG-VYDGHFDTNCFHRQEFFDTLRGVKSVSDDG 241
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A7S3YD23_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD23_HETAK) HSP 1 Score: 186 bits (471), Expect = 2.080e-53 Identity = 89/186 (47.85%), Postives = 124/186 (66.67%), Query Frame = 2
Query: 122 YEVDQCMG--DDIKNHRTICCSDMEMPVMGGIDVVNLFFQEPDTMPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEKLGPFIDLSQWTVYNDRLYFFGGAGPKMKFLAAGDEVLEL--GNTNWGSYYDGEVFDGHFDTNCFHRQTYEDLLAGK 667
+++DQC D K ++ CCSD + PV+GG+DVV+LFFQ P ++P +G D LPTSTG Y FLF+S NRD+F PW YAP +GG+ + GI+LE+++ +LGP +DLS+W V DRL+FFGG P+ FL DEV + G+ NW Y++G + DG F+TNCF RQ++ DL+ GK
Sbjct: 74 FKLDQCQDLLGDHKVDKSHCCSDPQYPVLGGVDVVSLFFQNPGSLPQLGKDEFHATLPTSTGEYTFLFASAENRDVFEAAPWKYAPAYGGFDSCGISLEERSQSADNRAELGPPVDLSKWAVVEDRLFFFGGQNPRQHFL---DEVAAVAQGDANWQLYFEGGLQDGIFNTNCFRRQSFYDLVLGK 256
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A7S2US12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US12_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.210e-40 Identity = 72/154 (46.75%), Postives = 95/154 (61.69%), Query Frame = 2
Query: 224 LFFQEPDT-MPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEKLGPFIDLSQWTVYNDRLYFFGGAGPKMKFLAAGDEVLELGNTNWGSYYDGEVF-DGHFDTNCFHRQTYEDLLAGKVTGD 679
LF + DT MP +GD IA +LPTS G YKF F++ NRD F DPW YAP GG+ + +AL+ KA + ++ KLGP +DL+QW++ NDRLYFF G K F A + G+ +W Y+D DG F+TNCF + Y+DLL G V D
Sbjct: 1 LFKLDDDTIMPKVGDPKIAAFLPTSQGLYKFFFTTTENRDEFFSDPWKYAPAVGGFDGFAMALQSKAAEAKFMMKLGPSVDLTQWSIVNDRLYFFSTPGGKSAFQIA-KNATDFGDEHWKLYFDEHALHDGVFNTNCFTKVRYQDLLTGHVFKD 153
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A7S2Y474_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y474_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.240e-33 Identity = 65/186 (34.95%), Postives = 104/186 (55.91%), Query Frame = 2
Query: 116 YKYEVDQCMGD--DIKNHRTICCSDMEMPVMGGIDVVNLFFQEPDTMPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEKLGPFIDLSQWTVYNDRLYFFGGAGPKMKFLAAGDEVLELGNTNWGSYYDGEVFDGHFDTNCFHRQTYEDLLAGK 667
+ +++DQCM ++ H+++CC+D + PV+GGIDVV L E +MP G + L T+ G Y F+F +E NRD F ++P Y P +GG+C +A KA +++LGP DL WT+ + + Y F G + +FL+ L + +W D E + G ++TNCF Q++ L+ K
Sbjct: 108 HPFKLDQCMKPTPNLIGHKSLCCTDPQYPVLGGIDVVQLQSIEAGSMPWAGFEGYTATLDTNFGEYTFMFYNEENRDTFKKNPSKYVPQFGGFCGCSLAWSAKATREELMDQLGPHTDLGTWTIVDGKTYLFSGPFSRDRFLSRNGGGLS--HEHWDGLIDDEAWKGPYNTNCFQHQSFVGLVQNK 291
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A6V1P5D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5D3_HETAK) HSP 1 Score: 119 bits (299), Expect = 1.040e-26 Identity = 64/184 (34.78%), Postives = 92/184 (50.00%), Query Frame = 2
Query: 128 VDQCMGDDIKNHRTICCSDMEMPVMGGIDVVNLFFQEPDTMPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEKLGPFIDLSQWTVYNDRLYFFGGAGPKMKFLAAGDEVLELGNTNWGSYYDGEVFDGHFDTNCFHRQTYEDLLAGKVTGD 679
+ C + + R CC+ V G+DVV + + P+MG + L TS Y F FSSE NR+ F+++PW YAP WGG+ AY ++ E++ LGP DLSQW + RLY FG A K ++ L+ + W +Y G+ FDG F+T C Y+ K+T D
Sbjct: 337 IGSCRSFEDMSSRGKCCTKDRYAVFDGVDVVAYSYLPDGSEPVMGKEEFPAKLQTSEKAYLFYFSSEENRNAFLENPWAYAPAWGGFDAYAMSAENEWGRGGSKRILGPDPDLSQWAYFEGRLYVFGNADSKAAWMTNPYPHLDEASKRWSGWY-GDPFDGVFNTKC-----YQGYTGPKLTMD 514
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A7S2V6B7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6B7_9STRA) HSP 1 Score: 100 bits (250), Expect = 6.840e-23 Identity = 53/123 (43.09%), Postives = 74/123 (60.16%), Query Frame = 2
Query: 122 YEVDQCMGDDIK-NHRTICCSDMEMPVMGGIDVVNLFFQEPDTMPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEK--LGPFIDLSQWTV 481
Y V+ C G D + R CC+D PV+GG DVV EP + P++G A LPT+ G Y F F++E NR +F+ DPW +AP WGG+ AY +A DK Y+ V K LGP +DL+++ +
Sbjct: 10 YMVEACDGADRDPSERAQCCADPTKPVLGGADVVAYRNVEPGSPPLLGLVDFAGILPTNLGNYVFFFANEENRQIFLDDPWAWAPAWGGFAAYTLAENDK-YEGKPVRKTYLGPSVDLAEFQI 131
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A7S2UY03_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY03_9STRA) HSP 1 Score: 102 bits (255), Expect = 8.000e-23 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 2
Query: 227 FFQEPDTMPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEKLGPFIDLSQWTVYNDRLYFFGGAGPKMKFLAAGDEVLELGNTNWGSYYDGEVFDGHFDTNCF 631
F Q D P GD + + T G + F F+S N++LF DPW +AP +GG+ A+ IAL++K LGP +DL++W V+ L+FF + F+ D + GN W ++D DG F+TNCF
Sbjct: 71 FVQALDRRPKFGDSAHRARIRTGRGSFSFYFASAENKELFESDPWKFAPMYGGFDAFKIALDEKLDAEGTDMALGPAVDLNKWAVHKGHLFFFSTDQYRQWFMDDPDNFMSGGNERWAQWFDSLAGDGTFNTNCF 205
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Match: A0A7S2UZ11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ11_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.720e-22 Identity = 60/179 (33.52%), Postives = 85/179 (47.49%), Query Frame = 2
Query: 122 YEVDQCMGDDIKNHRTICCSDMEMPVMGGIDVVNLFFQEPDTMPIMGDDSIAVYLPTSTGFYKFLFSSESNRDLFIQDPWHYAPTWGGYCAYGIALEDKAYDPTYVEKLGPFIDLSQWTV-YNDRLYFFGGAGPKMKFLAAGDEVLELGNTNWGSYYDGEVFDGHFDTNCFHRQTYEDL 655
Y C G IK +T CCSD PV+GG+DVV L P +G +PTS G + FLF + NR F+ DPW +AP +GG+ A+ +A D + +G DLS +T+ L F + + +L + W ++ G + DG F+T CF TY DL
Sbjct: 29 YSEGACDGTSIKE-KTSCCSDPRYPVLGGVDVVALREVHRGKPPALGTVQWPAAIPTSQGNFVFLFRDQDNRQRFLDDPWKFAPQYGGFSAWEMAASDSLRGDSAKRSIGTPTDLSVFTITVAGELLLFSDSEERSTYLNDYKHYGDKAQRKWVGWF-GAMEDGPFNTQCFQGTTYSDL 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1103.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1103.2.1 >prot_H-akashiwo_Contig1103.2.1 ID=prot_H-akashiwo_Contig1103.2.1|Name=mRNA_H-akashiwo_Contig1103.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=210bp MYSIRLAFACLLLVFVVSSAYKYEVDQCMGDDIKNHRTICCSDMEMPVMGback to top mRNA from alignment at H-akashiwo_Contig1103:92712..93571+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1103.2.1 ID=mRNA_H-akashiwo_Contig1103.2.1|Name=mRNA_H-akashiwo_Contig1103.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=860bp|location=Sequence derived from alignment at H-akashiwo_Contig1103:92712..93571+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1103:92712..93571+ >mRNA_H-akashiwo_Contig1103.2.1 ID=mRNA_H-akashiwo_Contig1103.2.1|Name=mRNA_H-akashiwo_Contig1103.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=630bp|location=Sequence derived from alignment at H-akashiwo_Contig1103:92712..93571+ (Heterosigma akashiwo CCMP452)back to top |