mRNA_H-akashiwo_Contig1102.10.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A7S3XSK1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSK1_HETAK) HSP 1 Score: 390 bits (1001), Expect = 1.190e-134 Identity = 193/195 (98.97%), Postives = 195/195 (100.00%), Query Frame = 1
Query: 1 LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAFKHTTERLKAIQNSYAHPDLLEEKFKVGERVWMLDPRKATGDNLKPMWKGPFEIIHVISAAVYQIQEEGAAQPILAHVNRLKKATA 585
LGVKLTPVSVYHPQANGRAERMVS+IKKTLKTMV+ENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAFKHTTERLKAIQNSYAHPDLLEEKFKVGERVWMLDPRKATGDNLKPMWKGPFEIIHVISAAVYQIQEEGAAQPILAHVNRLKKATA
Sbjct: 163 LGVKLTPVSVYHPQANGRAERMVSIIKKTLKTMVLENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAFKHTTERLKAIQNSYAHPDLLEEKFKVGERVWMLDPRKATGDNLKPMWKGPFEIIHVISAAVYQIQEEGAAQPILAHVNRLKKATA 357
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A162C9Z5_9CRUS (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A162C9Z5_9CRUS) HSP 1 Score: 95.5 bits (236), Expect = 1.180e-20 Identity = 60/197 (30.46%), Postives = 98/197 (49.75%), Query Frame = 1
Query: 1 LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAF---KHTTERLKAIQNSYAHPDLLEEKFKVGERVWMLDPRKA---TGDNLKPMWKGPFEIIHVISAAVYQIQEEGAAQPILAHVNRLK 573
L +K + YHPQ NG ER + + L+ + E W+ ++ AFA + + T ETP+FL HGRDAV+ P++ +Q TS++ P+ Y +R+L AF K E+ +A Q + ++++G++V +LD R T L P ++GP+ + + +IQ P L H NR+K
Sbjct: 18 LRIKHCTTTAYHPQTNGLTERFNKTVVEMLRKYISEGYEDWQDMLGHVAFAYRHSINSSTHETPYFLNHGRDAVM--PIDRWLQP--TSSDPITPQDYKSQTMKRLLKAFDLVKENLEKARAQQKEQYNKRAKTFEYQIGDKV-LLDVRTVKPGTSRKLNPRYQGPYRVTKINPNNTVEIQATPGTAPQLVHTNRIK 209
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A164MH87_9CRUS (Integrase catalytic domain-containing protein n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164MH87_9CRUS) HSP 1 Score: 95.5 bits (236), Expect = 5.420e-20 Identity = 61/197 (30.96%), Postives = 95/197 (48.22%), Query Frame = 1
Query: 1 LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAF---KHTTERLKAIQNSYAHPDLLEEKFKVGERVWMLD---PRKATGDNLKPMWKGPFEIIHVISAAVYQIQEEGAAQPILAHVNRLK 573
L +K + YHPQ NG ER + + L+ + + S WE+++ AFA + H T ETP+FL HGRD V+P + L+ A + P Y L +R+ AF K + + Q + E+ F +G++V ++D P T L P + GP+ + + + +IQE Q L HVNR+K
Sbjct: 121 LQIKQLRTTAYHPQTNGLTERFNKTVVEMLRKYMEQGFSKWEEVLGPVAFAYRNSVHSSTLETPYFLNHGRDPVVP-----IDRFLQKPANIIIPSDYKSQLMQRLHEAFVLVKANLTQAREQQRTQYDKRAREQAFNIGDKV-LIDVRTPMAGTSKKLIPRFMGPYRVTKINNNHTVEIQECAGKQTQLVHVNRIK 311
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A164T5G5_9CRUS (RNA-directed DNA polymerase n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164T5G5_9CRUS) HSP 1 Score: 97.1 bits (240), Expect = 6.640e-20 Identity = 63/197 (31.98%), Postives = 96/197 (48.73%), Query Frame = 1
Query: 1 LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAFKHTTERL---KAIQNSYAHPDLLEEKFKVGERVWMLD---PRKATGDNLKPMWKGPFEIIHVISAAVYQIQEEGAAQPILAHVNRLK 573
L +K + YHPQ NG ER + + L+ + + S WE+++ AAFA + H T ETP+FL HGRD V+P Q L+ A + P Y L +R+ AF L + Q + E+ F +G++V ++D P T L P++ GP+ + + + +IQE Q L HVNR+K
Sbjct: 640 LQIKQLRTTAYHPQTNGLTERFNKTVVEMLRKYMEQGFSKWEEVLGPAAFAYRNSVHSSTLETPYFLNHGRDPVVP-----IDQFLQKPANIIIPSDYKSQLMQRLHEAFLLVKANLTLSREQQRTQYDKRAREQAFNIGDKV-LIDVRTPMAGTSKKLIPLFVGPYRVTKINNKHTVEIQECVGKQTQLVHVNRIK 830
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A8J2RKQ4_9CRUS (RNA-directed DNA polymerase n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RKQ4_9CRUS) HSP 1 Score: 94.4 bits (233), Expect = 6.180e-19 Identity = 64/196 (32.65%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 1 LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAF---KHTTERLKAIQNSYAHPDLLEEKFKVGERVW--MLDPRKATGDNLKPMWKGPFEIIHVISAAVYQIQEEGAAQPILAHVNRLK 573
L VK + YHPQ NG ER + + ++ + + S WE + AFA + H T ETP+FL HGRD VL P++ +Q ++ V P Y L +RI AF + + +A Q + E+ ++VG++V M P T L P + GP+ + V S +I+E Q L H+NRLK
Sbjct: 858 LNVKHLRTTAYHPQTNGLTERFNRTMVEMIRKYLEKGFSRWEDALGPVAFAYRNSVHSSTNETPYFLNHGRDPVL--PIDHFLQVPNRTSTV--PSDYKSQLLQRIHEAFVLVQRNLHQARAQQKEQYDKRVNEQLYEVGDKVLLNMKTPILGTSKKLIPRFIGPYRVTKVNSNKTVEIRESPGKQTQLVHINRLK 1049
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A6J8CFA1_MYTCO (Integrase catalytic domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CFA1_MYTCO) HSP 1 Score: 92.4 bits (228), Expect = 1.390e-18 Identity = 60/198 (30.30%), Postives = 94/198 (47.47%), Query Frame = 1
Query: 1 LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAFKHTTERLKAIQNSYAHP-DLLEE--KFKVGERVWMLDPRKATGDNLKPM--WKGPFEIIHVISAAVYQIQE-EGAAQPILAHVNRLKK 576
+ K T + YHP+ +G ER + L V + W+ IP FA T+ H +ETPFFL+HGRD VL P+ A+ + +D Y + R+ AF + L+A Q DL + + +G+++W+ +P G + K + W GP+ II +S Y+IQ + HVNR+K+
Sbjct: 135 MNTKKTFTTAYHPETDGLVERFNGTLTAMLSMYVSGHQRDWDTFIPFVLFAYRTSLHESIQETPFFLIHGRDPVL--PVEAAMCPPTITYTSSDD--YKSEMVTRLQEAFTLAKDNLQAAQRKQKEQYDLKSDVINYAIGDKIWVFNPSTKPGLSTKLLHNWHGPYVIIDKLSDVNYKIQMCDSKKSEQTVHVNRIKQ 328
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A7M5XFT0_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XFT0_9CNID) HSP 1 Score: 92.8 bits (229), Expect = 2.070e-18 Identity = 59/197 (29.95%), Postives = 97/197 (49.24%), Query Frame = 1
Query: 1 LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAFKHTTERLKAIQNSYAH---PDLLEEKFKVGERVWMLDPRKATGDNLKPM--WKGPFEIIHVISAAVYQIQEE-GAAQPILAHVNRLK 573
L +K + YHPQ+NG ER+ + K + V + W++ +P FA T+ + KE+P++L+ GR+A LP L + + S +V D + ++ A + E LK Q H ++ ++FKVG+ VW+ + + G + K M W GPF I +S Y++ + +P HVNRLK
Sbjct: 465 LNIKQIKTTPYHPQSNGIVERLNGTLVKGISHFVASRQNDWDQYLPSVLFAYRTSVNESRKESPYYLMFGREATLPSDLQFNPGK-KLSPQVEDHRARIVG---QVQMAQRIANENLKKAQRKNKHYYDQNVKGKEFKVGDEVWLHNKARQKGLSPKLMAKWIGPFRITKKLSEVNYELSDPLNKRKPTAVHVNRLK 657
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A8K0CET4_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0CET4_9COLE) HSP 1 Score: 92.4 bits (228), Expect = 2.540e-18 Identity = 60/187 (32.09%), Postives = 92/187 (49.20%), Query Frame = 1
Query: 31 YHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAFKHTTERLKAI---QNSYAHPDLLEEKFKVGERVWMLDPRKATGDN---LKPMWKGPFEIIHVISAAVYQIQEEGAAQPILAHVNRLK 573
YHP +NG ER V + L V +N W++ IP A H T +P+FL+HGRD VL P + +Q R +V + YV L R+ AF + + L +N Y + + + F+ G+ V++ DP +G + +KP W GP+ II + Y+I+E + + H NRLK
Sbjct: 151 YHPASNGMIERCHKVFRDFLSHYVADNQRDWDEWIPYLQMAYCMNIHNSTGYSPYFLIHGRDPVL--PFDNILQSTRVKFDV--DQNYVSELISRLNQAFVNVKDNLTKTTEQRNQYFNSNREQSNFQSGDLVYLHDPAVKSGLSKKLIKP-WTGPYRIIEIKGPVTYKIKELNRHKEQIVHGNRLK 332
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A6J8B2H8_MYTCO (MRC n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B2H8_MYTCO) HSP 1 Score: 92.4 bits (228), Expect = 2.950e-18 Identity = 60/198 (30.30%), Postives = 95/198 (47.98%), Query Frame = 1
Query: 1 LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTAVQELRTSAEVADPEIYVQNLRERILTAFKHTTERLKAIQNSYAHP-DLLEE--KFKVGERVWMLDPRKATGDNLKPM--WKGPFEIIHVISAAVYQIQE-EGAAQPILAHVNRLKK 576
+ K T + YHP+ +G ER + L V + W+ IP FA T+ H +ETPFFL+HGRD+VL P+ A+ + +D Y + R+ AF + L+A Q DL + + +G+++W+ +P G + K + W GP+ II +S Y+IQ + HVNR+K+
Sbjct: 580 MNTKKTFTTAYHPETDGLVERFNGTLTAMLSMYVSGHQRDWDTFIPFVLFAYRTSLHESIQETPFFLMHGRDSVL--PVEAAMCPPTITYTSSDD--YKSEMVTRLQEAFTLAKDNLQAAQRKQKEQYDLKSDVINYAIGDKIWVFNPSTKPGLSTKLLHNWHGPYVIIDKLSDVNYKIQMCDSKKSEQTVHVNRIKQ 773
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Match: A0A7M5UYE4_9CNID (Uncharacterized protein n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5UYE4_9CNID) HSP 1 Score: 92.0 bits (227), Expect = 3.160e-18 Identity = 62/204 (30.39%), Postives = 95/204 (46.57%), Query Frame = 1
Query: 1 LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLPGPLNTA-VQELRTSAEVADPEIYVQNLRERILTAFKHTTERLKAIQNSYAHPDLLEEK-------FKVGERVWMLDPRKATG--DNLKPMWKGPFEIIHVISAAVYQIQEEGAAQPILAHVNRLKKAT 582
L +K + YHP NG ER + +TL W+ I A FA H T+ETPFFL+HGRD + PL+ A + E+A+ +E+++T+ + E K +N EE+ F VG+ VW+ P G + L+ W GP+ I+ IS ++++ EG P+ H +R+KK T
Sbjct: 189 LRIKRVHTTAYHPATNGLVERYNGTLARTLAQFTDAFQDDWDTHINSALFAYRVTPHSTTRETPFFLLHGRDPRM--PLDVALIPPTELEGELAEQ-------KEQLITSLRLAQETAK--ENMQRSQQANEERKTPVDAPFLVGDLVWLHVPDSIKGLSNKLRFRWHGPYRIVEQISPVNFKLEIEGRRVPVNVHASRIKKYT 381 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1102.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1102.10.1 >prot_H-akashiwo_Contig1102.10.1 ID=prot_H-akashiwo_Contig1102.10.1|Name=mRNA_H-akashiwo_Contig1102.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=196bp LGVKLTPVSVYHPQANGRAERMVSVIKKTLKTMVMENTSAWEKLIPLAAFback to top mRNA from alignment at H-akashiwo_Contig1102:344101..344688- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1102.10.1 ID=mRNA_H-akashiwo_Contig1102.10.1|Name=mRNA_H-akashiwo_Contig1102.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=588bp|location=Sequence derived from alignment at H-akashiwo_Contig1102:344101..344688- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1102:344101..344688- >mRNA_H-akashiwo_Contig1102.10.1 ID=mRNA_H-akashiwo_Contig1102.10.1|Name=mRNA_H-akashiwo_Contig1102.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=588bp|location=Sequence derived from alignment at H-akashiwo_Contig1102:344101..344688- (Heterosigma akashiwo CCMP452)back to top |