mRNA_H-akashiwo_Contig1101.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1101.2.1
Unique NamemRNA_H-akashiwo_Contig1101.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK)

HSP 1 Score: 398 bits (1022), Expect = 2.190e-130
Identity = 194/276 (70.29%), Postives = 234/276 (84.78%), Query Frame = 1
Query:  253 MQQWLFDHFASLSRDNDEDDKTQSQGEEDNERDLRVIFDLPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQNSD 1080
            M +W F+HF++LS+D D D               RV+FDLP+ I+REMIE+QI+KLKR KAAG+D +YNEI+I SA  +I +LE LFN++L +RYFPS WN+VMISPL+KSDD +D NNYRGISLLSCLGKLFC+I+NE++YT+VESA LL+D QGGFRRKRGCREQ FLLL +L++A R+RGR AHCAFVDFRKAYDSVKHSVLW+RL++LGLGPKL ELL+SIYDKVRCTVRKD++LSDLFPY IGV+ GCILSPIIFNLFI+EL N+I QNSD
Sbjct:    1 MDEW-FEHFSALSKDPDGDSVPLQDSVGG-----RVVFDLPNRITREMIEHQIRKLKRRKAAGIDAVYNEILIYSASFIIGALETLFNEVLKTRYFPSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELVNVIQQNSD 270          
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: UPI001E1E0690 (uncharacterized protein LOC123560678 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0690)

HSP 1 Score: 202 bits (514), Expect = 2.070e-54
Identity = 130/370 (35.14%), Postives = 201/370 (54.32%), Query Frame = 1
Query:    4 WYDTECRTKRRELRRAL-------NKEDGVKSTNYRNLFKDFRKLCKKKKMEFETKRLRELYRLDQEDPFAFWKALGAGKKNIQPDSSITMQQWLFDHFASLSRDND------EDDKTQSQGEEDNERDLRVIFDLPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQN 1074
            W+D EC+ K ++ + ++       N+E+ +     R   KD++   KK K +F  KR RE+  + ++ P  FW    A  K  Q   +I+M+++ + HF +L+   D      ED     +  +  + +     DLP  I+++ I     KLKR K++G+D I NE  I +   L +SLE+LFN IL S  FP  W   +I PL K   A D NNYRGI+L SC GKLF ++LNE +         LTD Q GFR      +  F+L  SLI+    + +  + AFVD++KAYD++  + LW +L   G+  K+++LL+S+Y+ V+  V+  + LSD F   +G+  G I SPI+F+ FIN+L   +  N
Sbjct:  235 WFDNECKEKLQKYKESIEHYTCRRNEENFIYMKQCR---KDYKYCVKKCKRQFNLKRAREMNEMRRKKPREFWNMFRA--KGKQSSENISMEEF-YTHFKNLAAGTDDVNPDVEDFMEHFEHRDVTQDEPLETIDLP--ITQDEIRKACSKLKRNKSSGIDCIINEYFIETIDILSDSLEILFNSILESGKFPKQWTQGVIVPLLKKPPATDTNNYRGITLTSCFGKLFTSVLNERLKNWAIENERLTDAQFGFRSGHSTTDAMFILQ-SLINLYNSKNKRLYAAFVDYQKAYDTIYRNGLWYKLIREGVDGKMLKLLRSMYEDVQSCVKHMNSLSDFFSCDMGLFQGEITSPILFSFFINDLEMHLQSN 595          
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: A0A6S7GA10_PARCT (Reverse transcriptase domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GA10_PARCT)

HSP 1 Score: 202 bits (513), Expect = 3.310e-54
Identity = 135/370 (36.49%), Postives = 201/370 (54.32%), Query Frame = 1
Query:    4 WYDTECRTKRRELRRALNKE--DGVKSTNYRNLF----KDFRKLCKKKKMEFETKRLRELYRLDQEDPFAFWKALGA---GKKNIQPDSSITMQQWLFDHFASLSRDNDEDDKTQSQGEEDNERDLRV--IFDLPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLLLCSLISA---KRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQ 1071
            W+D ECR KR  +R+  N++  D + + N RN +    K ++   K KK EF  +++ EL +  + DP +FWK L        N    ++I+ +QWL  HF +L   +  ++   +  +  N  +L      +L H IS   I N  KKLK+ K+A  D I NE+I  S   L++    LFN IL +  FPS W   +I+P++KSDD  + NNYRGI + SCLGK FC ILNE ++T  +    L   Q GF       +   L L SLI     +   G+   C FVDFRKA+DSV H  +  +L    +G K   L+K++Y   +C V++    +  FPY+ GV+ GCILSP++FN+++N+L  L + 
Sbjct:  333 WFDKECRIKRHAVRKLANQKHRDPI-NINLRNRYHHELKIYKNTLKLKKEEFHKQKIIELEKTAENDPNSFWKVLKTMDDEMPNNATSNTISEEQWLS-HFQTLHSKHSLNESQHNVTKTLNIEELNKNQYANLDHPISDLEIRNAAKKLKKNKSAYSDRIKNEMIKCSTHVLLQGFIKLFNLILEAGNFPSQWCEGLITPIFKSDDRLNCNNYRGICITSCLGKFFCLILNERLHTFTKENDTLHPSQIGFLPNHRTADH-ILTLKSLIDKYVNQTTNGKIYAC-FVDFRKAFDSVWHDGMLLKLLRNKIGGKFYNLIKNLYSNSQCAVKQSQHRTPFFPYSRGVRQGCILSPLLFNIYLNDLPQLFNN 698          
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: A0A4W5Q2H4_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5Q2H4_9TELE)

HSP 1 Score: 194 bits (493), Expect = 5.310e-53
Identity = 121/372 (32.53%), Postives = 209/372 (56.18%), Query Frame = 1
Query:    4 WYDTECRTKRRELRRALNKEDGVKST-----NYRNLFKDFRKLCKKKKMEFETKRLRELYR-LDQEDPFAFWKALGAGKKNIQPDSSITMQQWLFD-HFASLSRDNDEDDKTQSQGEEDNERDL--RVIFD----LPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLL--LCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQN 1074
            W+D EC+T R+ LR+  N++   ++       Y    K ++   K+KK+ +  K L E+   +DQ   +  W  L   K    P       + ++  +F +L ++  + D  Q+Q E   + ++   VI +    L + IS++ +  ++K +K  KA G+D I NE++ +S P L  ++  LFN +L+S  FP  WN  +ISP++KS D  DPNNYRGI + S LGK+FC+ILN  I T ++   L++  Q GF       +  + L  L +  + ++K G+   C F+DF+KA+DS+ H  L+ R+   GLG K+ +L+K +Y + +C ++  ++ ++ F  + GV+ GC LSP +FN++INEL +++  +
Sbjct:  158 WFDNECKTIRKHLRQMSNEKHKQQNNPDLRCEYFETLKQYKHTLKRKKLNYTNKTLDEIENAIDQNQFWDMWNNLSTTK----PQELAIQDEGIWKTYFDNLYKNISQKDLQQNQLEIQEKLNILESVIKNNQNPLDYPISQQELNEKLKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHAHQKKEGKIFAC-FIDFKKAFDSIWHEGLFYRILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADMLDHS 524          
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: A0A7D9KIT0_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KIT0_PARCT)

HSP 1 Score: 189 bits (481), Expect = 2.110e-52
Identity = 120/369 (32.52%), Postives = 195/369 (52.85%), Query Frame = 1
Query:    4 WYDTECRTKRRELRRALNKEDGVKSTN-----YRNLFKDFRKLCKKKKMEFETKRLRELYRLDQEDPFAFWKALGAGKKNIQPDSSITMQ---QWLFDHFASLSRDNDEDDKTQSQGE--EDNERDLRVIFDLPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLLLCSLIS---AKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQ 1071
            W+D +CR KR E+R+  N++    S N     Y    K +++  + KK  F  +++ EL +  ++DP +FWK+L     N+  + +  M    +WL  +F  L  ++   D+ +   E  E+ E+       L   I+   + +  K +K  KAA  D I NE+I SS   L++    +FN IL S +FP  W   +I+P++KS ++ DP+NYRGI + SC+GKLFC+ILN  +    +    +   Q GF    G R    +L    +     K+      +  FVDF+KA+DS+ H  L+ +L    +G +  EL+K++Y K +C ++     +  F Y  GV+ GCILSP++FN++INEL  L  +
Sbjct:    4 WFDKDCRFKRHEVRKLANQKHKDPSNNEIRTSYHKALKHYKETLESKKTIFHMEKIEELEKASEKDPISFWKSLKTSTDNLDFNETKNMPTEGEWLA-YFEKLHSEHKLGDEQEEILECLENYEKTKDRFNKLDGTITDTDLLDAAKNMKLKKAAYSDKIKNEMIKSSTGILLKGYLKVFNAILISGHFPESWCEGIITPIFKSGNSLDPSNYRGICVSSCMGKLFCSILNTRLACYTKEKKSIHPTQIGFIS--GNRTADHILTLKTLHDKYVKQSENGKIYACFVDFKKAFDSIWHKGLYLKLLENEIGGRFYELIKNMYSKTKCAIKLSDYRTSFFQYKKGVRQGCILSPLLFNIYINELPQLFEK 369          
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: A0A4W5NTX3_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5NTX3_9TELE)

HSP 1 Score: 192 bits (487), Expect = 7.390e-52
Identity = 120/372 (32.26%), Postives = 208/372 (55.91%), Query Frame = 1
Query:    4 WYDTECRTKRRELRRALNKEDGVKST-----NYRNLFKDFRKLCKKKKMEFETKRLRELYR-LDQEDPFAFWKALGAGKKNIQPDSSITMQQWLFD-HFASLSRDNDEDDKTQSQGEEDNERDL--RVIFD----LPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLL--LCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQN 1074
            W+D EC+T R+ LR+  N++   ++       Y    K ++   K+KK+ +  K L E+   +DQ   +  W  L   K    P       + ++  +F +L ++  + D  Q+Q E   + ++   VI +    L + IS++ +  ++K +K  KA G+D I NE++ +S P L  ++  LFN +L+S  FP  WN  +ISP++KS D  DPNNYRGI + S LGK+FC+ILN  I T ++   L++  Q GF       +  + L  L +    ++K G+   C F+DF+KA+DS+ H  L+ ++   GLG K+ +L+K +Y + +C ++  ++ ++ F  + GV+ GC LSP +FN++INEL +++  +
Sbjct:   58 WFDNECKTIRKHLRQMSNEKHKQQNNPDLRCEYFETLKQYKHTLKRKKLNYTNKTLDEIENAIDQNQFWDMWNNLSTTK----PQELAIQDEGIWKTYFDNLYKNISQKDLQQNQLEIQEKLNILESVIKNNQNPLDYPISQQELNEKLKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFAC-FIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADMLDHS 424          
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: A0A8K9URB1_ONCMY (Uncharacterized protein n=8 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8K9URB1_ONCMY)

HSP 1 Score: 193 bits (490), Expect = 2.000e-51
Identity = 121/371 (32.61%), Postives = 207/371 (55.80%), Query Frame = 1
Query:    4 WYDTECRTKRRELRRALNKEDGVKST-----NYRNLFKDFRKLCKKKKMEFETKRLRELYR-LDQEDPFAFWKALGAGKKNIQPDSSITMQQWLFDHFASLSRDNDEDDKTQSQGEEDNERDL--RVIFD----LPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLL--LCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQN 1074
            W+D EC+T R+ LR+  NK+   ++       Y    K +++  K KK+ +  K L E+   +DQ   +  W  L   K        + + +  FD+   L ++  + D  Q+Q E   + ++   VI +    L + I+++ +  ++K +K  KA GVD I NE++ +S P L  ++  LFN +L+S  FP  WN  +ISP++KS D  DPNNYRGI + S LGK+FC+ILN  I T ++   +++  Q GF       +  + L  L +    ++K G+   C F+DF+KA+DS+ H  L+ ++   GLG K+ +L+K +Y + +C ++  ++ ++ F    GV+ GC LSP +FN++INEL +++ Q+
Sbjct:  372 WFDNECKTIRKHLRQMSNKKHKQQNNPELRYEYFETLKQYKQTLKCKKLNYTNKTLDEIENAIDQNQFWDMWNNLSTTKPQELAIQDVGIWKTYFDN---LYKNIPQKDLNQNQLEIKEKLNILESVIKNNQNPLDYPITQQELNEKLKSIKSKKACGVDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKIFCSILNSRIQTFLQEKNVISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFAC-FIDFKKAFDSIWHEGLFYKILQSGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQCRGVRQGCNLSPNLFNIYINELADMLDQS 738          
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: A0A8K9Y4Y0_ONCMY (Uncharacterized protein n=44 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8K9Y4Y0_ONCMY)

HSP 1 Score: 194 bits (492), Expect = 2.450e-51
Identity = 121/371 (32.61%), Postives = 207/371 (55.80%), Query Frame = 1
Query:    4 WYDTECRTKRRELRRALNKEDGVKST-----NYRNLFKDFRKLCKKKKMEFETKRLRELYR-LDQEDPFAFWKALGAGKKNIQPDSSITMQQWLFDHFASLSRDNDEDDKTQSQGEEDNERDL--RVIFD----LPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLL--LCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQN 1074
            W+D EC+T R+ LR+  NK+   ++       Y    K +++  K KK+ +  K L E+   +DQ   +  W  L   K        + + +  FD+   L ++  + D  Q+Q E   + ++   VI +    L + I+++ +  ++K +K  KA GVD I NE++ +S P L  ++  LFN +L+S  FP  WN  +ISP++KS D  DPNNYRGI + S LGK+FC+ILN  I T ++   +++  Q GF       +  + L  L +    ++K G+   C F+DF+KA+DS+ H  L+ ++   GLG K+ +L+K +Y + +C ++  ++ ++ F    GV+ GC LSP +FN++INEL +++ Q+
Sbjct:  372 WFDNECKTIRKHLRQMSNKKHKQQNNPELRYEYFETLKQYKQTLKCKKLNYTNKTLDEIENAIDQNQFWDMWNNLSTSKPQELAIQDVGIWKTYFDN---LYKNIPQKDLNQNQLEIKEKLNILESVIKNNQNPLDYPITQQELNEKLKSIKSKKACGVDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKIFCSILNSRIQTFLQEKNVISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFAC-FIDFKKAFDSIWHEGLFYKILQSGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQCRGVRQGCNLSPNLFNIYINELADMLDQS 738          
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: A0A4W5K0Q8_9TELE (Ribonuclease H n=2 Tax=Salmoninae TaxID=504568 RepID=A0A4W5K0Q8_9TELE)

HSP 1 Score: 192 bits (487), Expect = 3.730e-51
Identity = 120/372 (32.26%), Postives = 208/372 (55.91%), Query Frame = 1
Query:    4 WYDTECRTKRRELRRALNKEDGVKST-----NYRNLFKDFRKLCKKKKMEFETKRLRELYR-LDQEDPFAFWKALGAGKKNIQPDSSITMQQWLFD-HFASLSRDNDEDDKTQSQGEEDNERDL--RVIFD----LPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLL--LCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQN 1074
            W+D EC+T R+ LR+  N++   ++       Y    K ++   K+KK+ +  K L E+   +DQ   +  W  L   K    P       + ++  +F +L ++  + D  Q+Q E   + ++   VI +    L + IS++ +  ++K +K  KA G+D I NE++ +S P L  ++  LFN +L+S  FP  WN  +ISP++KS D  DPNNYRGI + S LGK+FC+ILN  I T ++   L++  Q GF       +  + L  L +    ++K G+   C F+DF+KA+DS+ H  L+ ++   GLG K+ +L+K +Y + +C ++  ++ ++ F  + GV+ GC LSP +FN++INEL +++  +
Sbjct:  158 WFDNECKTIRKHLRQMSNEKHKQQNNPDLRCEYFETLKQYKHTLKRKKLNYTNKTLDEIENAIDQNQFWDMWNNLSTTK----PQELAIQDEGIWKTYFDNLYKNISQKDLQQNQLEIQEKLNILESVIKNNQNPLDYPISQQELNEKLKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHVHQKKEGKIFAC-FIDFKKAFDSIWHEGLFYKILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADMLDHS 524          
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Match: A0A3C1S4H7_9FLAO (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A3C1S4H7_9FLAO)

HSP 1 Score: 191 bits (486), Expect = 9.780e-51
Identity = 121/369 (32.79%), Postives = 194/369 (52.57%), Query Frame = 1
Query:    4 WYDTECRTKRRELRRALNKEDGVKSTNYR--------NLFKDFRKLCKKKKMEFETKRLRELYRLDQEDPFAFWKALGAGKKNIQPDSSITMQQWLFDHFASL----SRDNDEDDKTQSQGEEDNERDLRVIFDLPHYISREMIENQIKKLKRLKAAGVDGIYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSD-DADDPNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINELYNLIHQ 1071
            W+D EC +KR+      N   G KS   R        ++ K+++    K +  F     + L     +DP  FWK L +     + D +I++Q ++  HF  L    S  +D + K +   + +NE +L   F++        IE  IKKLK  K+ G+D I NE +      +  ++  LFN +L S   PSDW I +I PL+K+  D +D NNYRGI+LLS LGKLF + +N+ +   +E    L + Q GFR         F+L C +    +K+ R  +CAF+D+ KA+D +  S LW +L  +G+  K+I ++ ++YD  +  VRK + LSD F   +GV+ G  LSP++F +++N+  + + Q
Sbjct:  206 WFDEECESKRKAYMETKNAGYGKKSKQARKAHREILKHVEKEYKNFIAKTQNNFRINIAKVLKEAKSKDPKCFWKILKSKNSQSKKDGNISLQSFM-QHFQELNNLTSEQSDSEFKKEDLSQGNNE-ELNRDFNVDE------IEKLIKKLKTGKSCGIDNIINEYLKKCPTSMKNAIVSLFNLVLKSGIVPSDWCIGIIIPLFKNKGDINDVNNYRGITLLSVLGKLFTSAINQRLTKFLEGISALGEDQAGFREGYSTLNHIFVLHCIIDFYLQKKKRL-YCAFIDYSKAFDLINRSTLWIKLLGIGVKGKIINVIYNLYDSAKSCVRKCNNLSDFFHCNVGVRQGENLSPLLFAIYLNDFESFVAQ 565          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1101.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P5X7_HETAK2.190e-13070.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001E1E06902.070e-5435.14uncharacterized protein LOC123560678 n=1 Tax=Merce... [more]
A0A6S7GA10_PARCT3.310e-5436.49Reverse transcriptase domain-containing protein n=... [more]
A0A4W5Q2H4_9TELE5.310e-5332.53Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 Rep... [more]
A0A7D9KIT0_PARCT2.110e-5232.52Reverse transcriptase domain-containing protein (F... [more]
A0A4W5NTX3_9TELE7.390e-5232.26Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 Rep... [more]
A0A8K9URB1_ONCMY2.000e-5132.61Uncharacterized protein n=8 Tax=Oncorhynchus mykis... [more]
A0A8K9Y4Y0_ONCMY2.450e-5132.61Uncharacterized protein n=44 Tax=Oncorhynchus myki... [more]
A0A4W5K0Q8_9TELE3.730e-5132.26Ribonuclease H n=2 Tax=Salmoninae TaxID=504568 Rep... [more]
A0A3C1S4H7_9FLAO9.780e-5132.79Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1101contigH-akashiwo_Contig1101:119218..120297 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog10224.XP_006817258.1
PFAMsRVT_1
Model size1080
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.73e-45
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota,39TZY@33154|Opisthokonta,3BI15@33208|Metazoa,3CYKV@33213|Bilateria
Descriptionprotein phosphatase regulator activity
Cds size1080
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387082.8182285-CDS-H-akashiwo_Contig1101:119217..1202971681387082.8182285-CDS-H-akashiwo_Contig1101:119217..120297Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1101 119218..120297 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1101.2.1prot_H-akashiwo_Contig1101.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1101 119218..120297 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1101.2.1

>prot_H-akashiwo_Contig1101.2.1 ID=prot_H-akashiwo_Contig1101.2.1|Name=mRNA_H-akashiwo_Contig1101.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=360bp
RWYDTECRTKRRELRRALNKEDGVKSTNYRNLFKDFRKLCKKKKMEFETK
RLRELYRLDQEDPFAFWKALGAGKKNIQPDSSITMQQWLFDHFASLSRDN
DEDDKTQSQGEEDNERDLRVIFDLPHYISREMIENQIKKLKRLKAAGVDG
IYNEIIISSAPHLIESLEVLFNKILSSRYFPSDWNIVMISPLYKSDDADD
PNNYRGISLLSCLGKLFCAILNEYIYTRVESAGLLTDFQGGFRRKRGCRE
QGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGP
KLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVKSGCILSPIIFNLFINE
LYNLIHQNSD
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mRNA from alignment at H-akashiwo_Contig1101:119218..120297+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1101.2.1 ID=mRNA_H-akashiwo_Contig1101.2.1|Name=mRNA_H-akashiwo_Contig1101.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1080bp|location=Sequence derived from alignment at H-akashiwo_Contig1101:119218..120297+ (Heterosigma akashiwo CCMP452)
CGTTGGTATGATACAGAATGTAGGACAAAGAGACGGGAACTTCGCCGCGC ATTAAACAAAGAAGATGGGGTTAAATCAACGAATTATCGGAATTTGTTCA AGGATTTTAGAAAATTGTGTAAGAAGAAGAAAATGGAGTTTGAAACAAAA CGGCTAAGAGAACTCTATAGACTTGATCAGGAGGATCCGTTTGCATTTTG GAAAGCTTTAGGTGCGGGGAAGAAAAACATACAGCCTGATAGTTCGATCA CGATGCAGCAGTGGTTGTTCGATCATTTCGCGTCTCTTTCACGTGATAAT GATGAAGACGATAAAACACAATCACAAGGGGAAGAAGATAACGAGAGAGA TTTGAGGGTAATTTTTGATCTACCACACTATATCTCTAGGGAGATGATTG AGAATCAAATTAAAAAACTAAAACGACTAAAGGCAGCTGGTGTAGACGGC ATCTATAATGAAATTATAATTTCTTCAGCTCCACATCTCATTGAGTCCCT CGAAGTTTTATTCAACAAAATCCTTAGCAGCCGTTACTTCCCGTCCGATT GGAACATTGTGATGATCTCACCACTCTACAAAAGTGACGATGCAGATGAT CCGAATAACTACAGGGGAATCTCGCTACTTTCCTGTTTAGGTAAACTTTT CTGTGCAATATTGAATGAGTATATCTATACGCGGGTGGAGTCGGCGGGCC TCTTGACAGATTTTCAGGGCGGTTTCCGTAGAAAGAGAGGGTGTAGGGAG CAGGGCTTTCTGCTTCTATGTTCATTGATTTCGGCAAAGAGAAAAAGGGG TAGGTACGCTCACTGCGCCTTTGTTGACTTCCGGAAAGCGTATGATTCCG TGAAACATTCTGTCCTGTGGGAGCGTCTTGAAGCTTTGGGCTTGGGCCCG AAGTTGATTGAACTCCTTAAGAGTATTTACGACAAAGTAAGATGTACAGT TCGAAAGGACCACAAATTATCGGATCTCTTCCCCTATACAATTGGAGTTA AGTCAGGATGTATTTTATCTCCAATCATTTTTAATCTCTTCATCAACGAA CTGTACAACTTGATACACCAAAACTCGGAT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1101:119218..120297+

>mRNA_H-akashiwo_Contig1101.2.1 ID=mRNA_H-akashiwo_Contig1101.2.1|Name=mRNA_H-akashiwo_Contig1101.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1080bp|location=Sequence derived from alignment at H-akashiwo_Contig1101:119218..120297+ (Heterosigma akashiwo CCMP452)
CGTTGGTATGATACAGAATGTAGGACAAAGAGACGGGAACTTCGCCGCGC
ATTAAACAAAGAAGATGGGGTTAAATCAACGAATTATCGGAATTTGTTCA
AGGATTTTAGAAAATTGTGTAAGAAGAAGAAAATGGAGTTTGAAACAAAA
CGGCTAAGAGAACTCTATAGACTTGATCAGGAGGATCCGTTTGCATTTTG
GAAAGCTTTAGGTGCGGGGAAGAAAAACATACAGCCTGATAGTTCGATCA
CGATGCAGCAGTGGTTGTTCGATCATTTCGCGTCTCTTTCACGTGATAAT
GATGAAGACGATAAAACACAATCACAAGGGGAAGAAGATAACGAGAGAGA
TTTGAGGGTAATTTTTGATCTACCACACTATATCTCTAGGGAGATGATTG
AGAATCAAATTAAAAAACTAAAACGACTAAAGGCAGCTGGTGTAGACGGC
ATCTATAATGAAATTATAATTTCTTCAGCTCCACATCTCATTGAGTCCCT
CGAAGTTTTATTCAACAAAATCCTTAGCAGCCGTTACTTCCCGTCCGATT
GGAACATTGTGATGATCTCACCACTCTACAAAAGTGACGATGCAGATGAT
CCGAATAACTACAGGGGAATCTCGCTACTTTCCTGTTTAGGTAAACTTTT
CTGTGCAATATTGAATGAGTATATCTATACGCGGGTGGAGTCGGCGGGCC
TCTTGACAGATTTTCAGGGCGGTTTCCGTAGAAAGAGAGGGTGTAGGGAG
CAGGGCTTTCTGCTTCTATGTTCATTGATTTCGGCAAAGAGAAAAAGGGG
TAGGTACGCTCACTGCGCCTTTGTTGACTTCCGGAAAGCGTATGATTCCG
TGAAACATTCTGTCCTGTGGGAGCGTCTTGAAGCTTTGGGCTTGGGCCCG
AAGTTGATTGAACTCCTTAAGAGTATTTACGACAAAGTAAGATGTACAGT
TCGAAAGGACCACAAATTATCGGATCTCTTCCCCTATACAATTGGAGTTA
AGTCAGGATGTATTTTATCTCCAATCATTTTTAATCTCTTCATCAACGAA
CTGTACAACTTGATACACCAAAACTCGGAT
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