mRNA_H-akashiwo_Contig110.42.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 120 bits (302), Expect = 2.830e-30 Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSVLPTLATTFERV 222
GPDGVSPRVLK CA +L PL RLFQK+ +AA FP SWKVARVTPVYKK DA+ PKNYRP+SVLPTLATTFERV
Sbjct: 330 GPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTFERV 403
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 118 bits (296), Expect = 2.220e-29 Identity = 58/74 (78.38%), Postives = 63/74 (85.14%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSVLPTLATTFERV 222
GPDGVSPRVLK CA +L PL RLFQK+ +AA FP SWKVARVTPV+KK DA PKNYRP+SVLPTLATTFERV
Sbjct: 330 GPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVHKKEDANLPKNYRPISVLPTLATTFERV 403
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: A0A093J4Z1_FULGA (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Fulmarus glacialis TaxID=30455 RepID=A0A093J4Z1_FULGA) HSP 1 Score: 78.2 bits (191), Expect = 4.460e-17 Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSVLPTLATTFER 219
GPDG+ PRVL+ AKEL PL+ ++Q+ PD W++A V+P+YKKG DP NYRPVS+ L ER
Sbjct: 23 GPDGIHPRVLRELAKELAKPLSIIYQQSWLTGDVPDDWRLANVSPIYKKGQKEDPGNYRPVSLTSVLGNIMER 95
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: UPI001E1CD5A2 (uncharacterized protein LOC123519737 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CD5A2) HSP 1 Score: 83.2 bits (204), Expect = 5.900e-17 Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSVLPTLATTFE 216
GPDG+SPRVLK CA+EL PLA +F +P SWK A V PV+KKG +DP++YRP+S+L + FE
Sbjct: 404 GPDGISPRVLKQCARELSVPLAAIFSACLAEKKWPASWKEAYVVPVHKKGSKSDPRHYRPISLLSVMGKVFE 475
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: A0A0P4VX79_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VX79_SCYOL) HSP 1 Score: 82.0 bits (201), Expect = 1.570e-16 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSVLPTLATTFERV 222
GPD VSPR+LKHCA+EL PL +F R +P WK ARV PV+KK ++P NYRP+S+L + E++
Sbjct: 384 GPDDVSPRLLKHCARELSAPLTTVFTSCLREKKWPSVWKEARVVPVHKKNSRSEPNNYRPISLLSVMGKLLEKI 457
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: A0A1X7U5L0_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U5L0_AMPQE) HSP 1 Score: 80.9 bits (198), Expect = 1.670e-16 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSVLPTLATTFERV 222
G DG+SP VLKHCA L PL LF + ++A FP WKV +TP++K GD T +NYRP+S+L T++ E++
Sbjct: 239 GIDGISPAVLKHCATPLCTPLCHLFCESLKSACFPSDWKVHNITPIFKSGDKTSVRNYRPISLLNTVSKVLEKL 312
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: A0A8J9YRX4_BRALA (Hypp6244 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YRX4_BRALA) HSP 1 Score: 81.6 bits (200), Expect = 2.120e-16 Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSVLPTLATTFERV 222
GPDG++ ++L+ A E+ L +LF +FP WK + VTPV+KKGD TDP NYRP+S+LPT+A FER+
Sbjct: 176 GPDGITTKLLREAALEICVSLQQLFNYSLSTGIFPMEWKQSNVTPVFKKGDRTDPLNYRPISLLPTVAKVFERL 249
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: Q0MWX5_9NEOP (Reverse transcriptase (Fragment) n=1 Tax=Phengaris teleius TaxID=203778 RepID=Q0MWX5_9NEOP) HSP 1 Score: 77.4 bits (189), Expect = 4.770e-16 Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSVLPTLATTFE 216
GPDG+ P ++ C L PL+ +F K FPD WK+A++TP+YK GD D NYRP+S+L LA FE
Sbjct: 1 GPDGIPPFFVRMCGSALSTPLSIIFNKSLSQGTFPDLWKIAKITPIYKCGDKNDVTNYRPISILNCLAKIFE 72
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: UPI0012D451D1 (uncharacterized protein LOC116346514 n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D451D1) HSP 1 Score: 76.6 bits (187), Expect = 6.470e-16 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSVLPTLATTFERV 222
GPDG+SP++LK+CAK L PL LF+K PD K +R+ P++K G NYRPV ++PT+A FE V
Sbjct: 75 GPDGISPKLLKNCAKSLATPLTVLFRKSLHQGCVPDVLKKSRIVPIFKSGKKNSASNYRPVVIIPTIAKIFEMV 148
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Match: A0A093NT31_PYGAD (Uncharacterized protein (Fragment) n=1 Tax=Pygoscelis adeliae TaxID=9238 RepID=A0A093NT31_PYGAD) HSP 1 Score: 73.9 bits (180), Expect = 1.180e-15 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGDATDPKNYRPVSV 189
GPDG+ PRVL+ A+EL PL+ ++Q+ PD W++A VTP+YKKG DP NYRPVS+
Sbjct: 1 GPDGIHPRVLRELAEELAKPLSIIYQQSWLTGEVPDDWRLANVTPIYKKGRKKDPGNYRPVSL 63 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig110.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig110.42.1 >prot_H-akashiwo_Contig110.42.1 ID=prot_H-akashiwo_Contig110.42.1|Name=mRNA_H-akashiwo_Contig110.42.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=74bp GPDGVSPRVLKHCAKELDGPLARLFQKVERAAVFPDSWKVARVTPVYKKGback to top mRNA from alignment at H-akashiwo_Contig110:1635698..1635921+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig110.42.1 ID=mRNA_H-akashiwo_Contig110.42.1|Name=mRNA_H-akashiwo_Contig110.42.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=224bp|location=Sequence derived from alignment at H-akashiwo_Contig110:1635698..1635921+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig110:1635698..1635921+ >mRNA_H-akashiwo_Contig110.42.1 ID=mRNA_H-akashiwo_Contig110.42.1|Name=mRNA_H-akashiwo_Contig110.42.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=222bp|location=Sequence derived from alignment at H-akashiwo_Contig110:1635698..1635921+ (Heterosigma akashiwo CCMP452)back to top |