mRNA_H-akashiwo_Contig110.37.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: A0A6V1P7M0_HETAK (Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7M0_HETAK) HSP 1 Score: 226 bits (576), Expect = 2.150e-74 Identity = 115/119 (96.64%), Postives = 118/119 (99.16%), Query Frame = 1
Query: 1 MAGKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKAKT 357
MAGKAGRGKKSQT+SSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYL+AV+EYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKK KT
Sbjct: 27 MAGKAGRGKKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKTKT 145
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: A0A7S3UYM8_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM8_HETAK) HSP 1 Score: 210 bits (535), Expect = 6.250e-68 Identity = 106/116 (91.38%), Postives = 112/116 (96.55%), Query Frame = 1
Query: 4 AGKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKA 351
A GRGKKSQ+KSSKAGLQFPVGRIGRYLK GRYSARVGAGAPVYL+AV+EYLCAEILELAGNAARDNKKTRI+PRHLQLAVRNDEELNKLLGGVTI+QGGVLPNIHTVLLPKK+
Sbjct: 34 AAAGGRGKKSQSKSSKAGLQFPVGRIGRYLKNGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTISQGGVLPNIHTVLLPKKS 149
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: A0A7S2GRL8_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRL8_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.120e-62 Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 1
Query: 7 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKA 351
GK GRGKKS T S+KAGLQFPVGRIGRYLKQG+++ R+GAGAPVYL+AV+EYLCAEILELAGNAARDNKK+RI PRH+ LAV+NDEELNKLLGGVTIA GGVLPNIH+VLLPKKA
Sbjct: 5 GKGGRGKKSTTSSAKAGLQFPVGRIGRYLKQGKFATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIAPRHITLAVKNDEELNKLLGGVTIAGGGVLPNIHSVLLPKKA 119
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: A0A7S2V3S5_9STRA (Histone H2A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3S5_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.860e-62 Identity = 95/110 (86.36%), Postives = 106/110 (96.36%), Query Frame = 1
Query: 25 KKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKAK 354
KKS TKS+KAGLQFPVGRIGR+LK+GRY+ RVGAGAPVY++AV+EYLCAEILELAGNAARDNKK+RI+PRHLQLA+RNDEELNKLLGGVTI+QGGVLPNIH VLLPKK K
Sbjct: 7 KKSVTKSTKAGLQFPVGRIGRFLKKGRYAPRVGAGAPVYMAAVLEYLCAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGGVTISQGGVLPNIHAVLLPKKTK 116
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: A0A7R9YCM0_9STRA (Histone H2A n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCM0_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.120e-61 Identity = 94/110 (85.45%), Postives = 105/110 (95.45%), Query Frame = 1
Query: 28 KSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKAKT 357
KS T+SSKAGLQFPVGR+GRYLKQGRY R+G+GAPVYL+AV+EYLCAEILELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLG VTIAQGGVLPNIH VLLPKK+K+
Sbjct: 22 KSMTRSSKAGLQFPVGRVGRYLKQGRYCDRIGSGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHVQLAVRNDEELNKLLGNVTIAQGGVLPNIHNVLLPKKSKS 131
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.790e-61 Identity = 97/116 (83.62%), Postives = 108/116 (93.10%), Query Frame = 1
Query: 7 GKAGRG-KKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKA 351
GK GRG KKS T S+KAGLQFPVGRIGRYL+QG+Y+ R+GAGAPVYL+AV+EYLCAEILELAGNAARDNKK+RIVPRH+ LAV+NDEELNKLLGGVTIA GGVLPNIH VLLPKK+
Sbjct: 5 GKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKS 120
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI) HSP 1 Score: 192 bits (488), Expect = 2.550e-61 Identity = 94/114 (82.46%), Postives = 107/114 (93.86%), Query Frame = 1
Query: 7 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKK 348
GK GRGKKS T+S+KAGLQFPVGR+GR+LK+G+Y++RVGAGAPVYL+AV+EYL AE+LELAGNAARDNKK RI+PRH+QLAVRNDEELNKLLG VTIA GGVLPNIH VLLPKK
Sbjct: 5 GKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE) HSP 1 Score: 192 bits (489), Expect = 2.730e-61 Identity = 96/115 (83.48%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 7 GKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKA 351
GK GRGKKS +KSSKAGLQFPV RIGRYLK+G+Y+ RVGAGAPVYL+AV+EYL AE+LELAGNAARDNKK RI+PRH+QLAVRNDEELNKLLG VTIA GGVLPNIH VLLPKK+
Sbjct: 5 GKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: B7FWQ2_PHATC (Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FWQ2_PHATC) HSP 1 Score: 192 bits (488), Expect = 2.900e-61 Identity = 97/119 (81.51%), Postives = 109/119 (91.60%), Query Frame = 1
Query: 7 GKAGRG-KKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKAKTT 360
GK GRG KKS T S+KAGLQFPVGRIGRYL+QG+Y+ R+GAGAPVYL+AV+EYLCAEILELAGNAARDNKK+RIVPRH+ LAV+NDEELNKLLGGVTIA GGVLPNIH +LLPKK+ T
Sbjct: 7 GKGGRGDKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIAAGGVLPNIHAILLPKKSGPT 125
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Match: A0A7S0S3G4_9CHLO (Histone H2A n=2 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S3G4_9CHLO) HSP 1 Score: 192 bits (489), Expect = 3.010e-61 Identity = 93/115 (80.87%), Postives = 109/115 (94.78%), Query Frame = 1
Query: 10 KAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAVMEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIHTVLLPKKAK 354
K G GKK+Q++S+KAGLQFPVGRI RYLK+G+Y+ R+GAGAPVYL+AV+EYLCAE+LELAGNAARDNKKTRIVPRH+QLA+RNDEEL+KLLG VTIA GGVLPNIH+VLLPKK+K
Sbjct: 16 KGGSGKKAQSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLCAEVLELAGNAARDNKKTRIVPRHIQLAIRNDEELSKLLGEVTIASGGVLPNIHSVLLPKKSK 130 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig110.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig110.37.1 >prot_H-akashiwo_Contig110.37.1 ID=prot_H-akashiwo_Contig110.37.1|Name=mRNA_H-akashiwo_Contig110.37.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=121bp MAGKAGRGKKSQTKSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLSAback to top mRNA from alignment at H-akashiwo_Contig110:1413671..1414033+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig110.37.1 ID=mRNA_H-akashiwo_Contig110.37.1|Name=mRNA_H-akashiwo_Contig110.37.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=363bp|location=Sequence derived from alignment at H-akashiwo_Contig110:1413671..1414033+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig110:1413671..1414033+ >mRNA_H-akashiwo_Contig110.37.1 ID=mRNA_H-akashiwo_Contig110.37.1|Name=mRNA_H-akashiwo_Contig110.37.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=363bp|location=Sequence derived from alignment at H-akashiwo_Contig110:1413671..1414033+ (Heterosigma akashiwo CCMP452)back to top |