mRNA_H-akashiwo_Contig11.53.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig11.53.1
Unique NamemRNA_H-akashiwo_Contig11.53.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: A0A6T7BPQ5_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7BPQ5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.050e-40
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 3 
Query:    3 ELEFTLGDGTDFLVKDWSDGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQKTTEP 269
            E+ FT GD TD  V DWSDGD+LFANSTCFDD+LM K+A +A +LKKGA+FITFT+RLPS HFEVLEH+MYQMSWGGATVYIQQK T+P
Sbjct:   63 EIGFTHGDATDPEVCDWSDGDVLFANSTCFDDALMKKVAGQAVTLKKGAVFITFTKRLPSHHFEVLEHQMYQMSWGGATVYIQQKMTDP 151
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BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: A0A7S2GDF8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDF8_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.220e-39
Identity = 67/95 (70.53%), Postives = 83/95 (87.37%), Query Frame = 3 
Query:    9 EFTLGDGTDFLVKDWSDGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQKTTEPVPAADLVG 293
            EFTLGDGTD    DWS+G+++FANSTCFDD+LM KIA+KAA LKKG+IFITFT++LPS +FEVLE+EMYQMSWGGATV+IQQKT++P+   +  G
Sbjct:   90 EFTLGDGTDMGCLDWSNGNLIFANSTCFDDALMEKIADKAALLKKGSIFITFTKKLPSPYFEVLEYEMYQMSWGGATVFIQQKTSDPISPTETEG 184
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BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: F0XWY6_AURAN (DOT1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWY6_AURAN)

HSP 1 Score: 129 bits (323), Expect = 9.790e-32
Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 3 
Query:    6 LEFTLGDGTDFLVKDWSDGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQKTTEPVPAADLVGPPPGVCAGGAAP 329
            ++F   D TD    DWS GD++FANSTCFDD ++A +A +AA LK+GA FITFT++LPS HFEV E E++QMSWGGATV+IQQK T+P   +D  G  P   A G  P
Sbjct:  196 VDFYEADVTDLGAHDWSGGDVVFANSTCFDDGMLAAVARRAARLKRGAFFITFTKKLPSDHFEVRESELHQMSWGGATVFIQQKVTDPADESDPPGEAPVSAAWGRKP 303
[Close]
BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: A0A7S2RS53_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS53_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.760e-30
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 3 
Query:    6 LEFTLGDGTDFLVKDWSDGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQKTTEP 269
            +EF  GD TD    DW+DGD++FANSTCFDDSLM  +A+ A  +K G+IFIT T+RLPS  F+VLE ++YQMSWGGATVYIQQK T+P
Sbjct:  208 VEFVHGDVTDLATLDWTDGDVVFANSTCFDDSLMQAVAKLAGGMKMGSIFITLTKRLPSKSFKVLEQQLYQMSWGGATVYIQQKLTDP 295
[Close]
BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: A0A6H5JPB2_9PHAE (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB2_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.570e-29
Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = 3 
Query:    3 ELEFTLGDGTDFLVKDWSDGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQKTTEP 269
            ++EF LGD  D  V DWSD  ++FANSTCFDD+LM ++A  A +LKKG IFIT T+RLP+ +F+VLEH+M+ MSWG ATVYI QKTT P
Sbjct:  233 KVEFFLGDALDMNVCDWSDATVVFANSTCFDDTLMRRLASAATALKKGTIFITLTKRLPAAYFKVLEHDMFPMSWGSATVYISQKTTAP 321
[Close]
BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: A0A7S3HDG2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDG2_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.710e-28
Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 3 
Query:   21 GDGTDFLVKDWSDGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQKTTE 266
            GD      KDW D D++F NSTCFD++LM K+A  AA +KKG+ FIT T+RLPS+ FE+LE+EMY+MSWG ATV++ QKTTE
Sbjct:   35 GDFLKLRTKDWRDADVVFMNSTCFDETLMGKVAHLAAGMKKGSFFITMTKRLPSSEFEILEYEMYRMSWGEATVFVSQKTTE 116
[Close]
BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: A0A836CL60_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL60_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.300e-26
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 3 
Query:    6 LEFTLGDGTDFLVKDWSDGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQKTT 263
            + F  GD TD  V DWS  D++FANSTCF D+LM  IA+  ASL+ GA  ITFTR+LPS  F VLEH+MY+MSWGGATV+IQQKT+
Sbjct:  199 VNFWHGDATDLGVFDWSTADVVFANSTCFHDALMRSIADCCASLRVGAFVITFTRQLPSPLFTVLEHQMYEMSWGGATVFIQQKTS 284
[Close]
BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: A0A7S2X7Y4_9EUKA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X7Y4_9EUKA)

HSP 1 Score: 102 bits (255), Expect = 2.270e-22
Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 3 
Query:    3 ELEFTLGDGTDFLVKDWSDGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQKTTEPVPAAD 284
            +++F  GD    +  DWSD D+ FANSTCFD  LM ++A+ A S+KK + FITFT+ LPS  ++VLE E + MSWG ATVYIQQK  EP P++D
Sbjct:  163 DIQFICGDA---VAYDWSDADLCFANSTCFDSKLMQQLAKAADSMKKDSFFITFTKELPSKAWKVLEAERHNMSWGQATVYIQQKLAEP-PSSD 252
[Close]
BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: A0A7S3ZY34_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZY34_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.720e-20
Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 3 
Query:    6 LEFTLGDGTDFLVKDWS-DGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQKTTE 266
            +EF  GD TD    DW+ DGD++  NSTCFDD L+  +A+ A  L+ GA+ ITFTR LPS  F +++ E++QMSWGGATV++Q++  E
Sbjct:  169 VEFYEGDITDLKFHDWTADGDVVLVNSTCFDDDLLKAVADLAEGLRPGAVVITFTRPLPSPLFTIVDEELHQMSWGGATVFVQRRDGE 256
[Close]
BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Match: A0A7S1TW39_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW39_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.340e-20
Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 3 
Query:    9 EFTLGDGTDFLVKDWSDGDILFANSTCFDDSLMAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQK 257
            E T+  G+ FL  DWSDGD++FANSTCFDD LM KIA +AA+L+ GA  ITFT+ L S  FEVL  + Y MSWG ATVYI ++
Sbjct:  190 EVTVHQGS-FLDYDWSDGDVIFANSTCFDDDLMRKIAVRAAALQPGAYVITFTKGLESEDFEVLFKKRYDMSWGPATVYIHRR 271
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6T7BPQ5_9STRA5.050e-4076.40Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2GDF8_9STRA1.220e-3970.53Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0XWY6_AURAN9.790e-3256.48DOT1 domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S2RS53_9STRA2.760e-3064.77Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A6H5JPB2_9PHAE1.570e-2962.92Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S3HDG2_9STRA6.710e-2860.98Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A836CL60_9STRA1.300e-2663.95Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2X7Y4_9EUKA2.270e-2254.26Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S3ZY34_9STRA1.720e-2051.14Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S1TW39_9STRA2.340e-2060.24Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig11contigH-akashiwo_Contig11:1963164..1966027 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009032488.1
PFAMsDOT1
Model size852
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.43e-20
EggNOG OGs2BR00@1|root,2S3F7@2759|Eukaryota
DescriptionHistone methylation protein DOT1
Cds size288
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig11.53.1prot_H-akashiwo_Contig11.53.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig11 1963268..1965567 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387078.7434487-UTR-H-akashiwo_Contig11:1963163..19632671681387078.7434487-UTR-H-akashiwo_Contig11:1963163..1963267Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig11 1963164..1963267 +
1681387078.8019197-UTR-H-akashiwo_Contig11:1965567..19660271681387078.8019197-UTR-H-akashiwo_Contig11:1965567..1966027Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig11 1965568..1966027 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387078.7558088-CDS-H-akashiwo_Contig11:1963267..19632921681387078.7558088-CDS-H-akashiwo_Contig11:1963267..1963292Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig11 1963268..1963292 +
1681387078.7682521-CDS-H-akashiwo_Contig11:1963753..19638421681387078.7682521-CDS-H-akashiwo_Contig11:1963753..1963842Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig11 1963754..1963842 +
1681387078.782772-CDS-H-akashiwo_Contig11:1964316..19644241681387078.782772-CDS-H-akashiwo_Contig11:1964316..1964424Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig11 1964317..1964424 +
1681387078.7923281-CDS-H-akashiwo_Contig11:1965501..19655671681387078.7923281-CDS-H-akashiwo_Contig11:1965501..1965567Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig11 1965502..1965567 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig11.53.1

>prot_H-akashiwo_Contig11.53.1 ID=prot_H-akashiwo_Contig11.53.1|Name=mRNA_H-akashiwo_Contig11.53.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=96bp
MAKIAEKAASLKKGAIFITFTRRLPSTHFEVLEHEMYQMSWGGATVYIQQ
KTTEPVPAADLVGPPPGVCAGGAAPWKMNLKKIHQLQLLQLMVVI*
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mRNA from alignment at H-akashiwo_Contig11:1963164..1966027+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig11.53.1 ID=mRNA_H-akashiwo_Contig11.53.1|Name=mRNA_H-akashiwo_Contig11.53.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2864bp|location=Sequence derived from alignment at H-akashiwo_Contig11:1963164..1966027+ (Heterosigma akashiwo CCMP452)
CAGAGCTGGAGTTTACTTTGGGCGATGGTACAGATTTTCTTGTAAAAGAC
TGGAGTGATGGAGATATTTTGTTTGCTAATTCGACTTGTTTTGATGACTC
TTTGATGGCCAAGATCGCTGAGAAAGCAGGTATTAATTTGTTATTGATTA
CTTATCCTCTAGAAGAAGCATCTTGCTCAGTGGTCAGCAGGATGGGTCTA
CTGCCTGTGGCTTTTGGTGTATAGTAGTACTCTTCAAGTCGAGTGAGTTG
CCATTAGACTTTCATGAGGGACAGCCAAGGCCGCTCCTATACCAAAGAAA
CTGTTTCAATAATGTTGCCAGAATCTGGCTATGCAGGCAGTGGTAGATTT
ATGGTTTGTGCGTGGTGTCTGAATAGAGGTACACTGGCAAGTTTTGCGAT
TAATAGAGGTGGTAGTATAGCAAGGGGACCTCGAATTGGAGGGTCCATTT
ATGCAGTATGGATGGACCTTGGATGTAATACATTCACCTTCGTCATCGCT
ATATATCATCTTGTTTCATCAGTGTGTACAATAATTTTTCTCTGTTATCG
TTGTGCTGCATGCTGTGGAACAAACCCTACAACTCAACAGCCTCTTTGAA
AAAGGGCGCCATCTTCATCACCTTCACTCGGCGGCTTCCCAGCACGCACT
TTGAAGTCCTTGAGCACGAGATGTACCAGGTGTGCCCTGCCCCCCCCCCC
CCTGCCACCCAACCCTCCCGTTCTCCGCCCTTGCTGTGCCACGCGACAGC
TGCGCTCAAGAAGGGCGCCATCTTCATCACCTTCACCCGGCGCCTGCCCA
GCGCGCACTTCGAAGTGCTTGAGCACGAGATTTATCAGGTCCCCTACCCC
TTTTCTTATCCCTTCCCACGTCTTGTTGTCAACGAGGAAGCGGAAATATC
TCTTCCTTGCGCCTCTGGTTTCAACAGATAAGTGTTTCTCTGGACTTAGG
CGTCGACCTGCGACAAAGTTTCGCGGTTATGCCAGCCTTTTCTCCTGGGC
ACCCTGCCTGCTTCCTACTGTGTGAGGATGTGAGGATAGCTCCCTCTTCT
AGCAGCAGCGATACCCAGCCCCCCCACTCGTCCTCTTCCAACATACCTAT
AGCCCCACCGCAGCCCCGTGCACCCACCCTGCCCGCTGGGGATTGGGGGG
CAGATGAGCTGGGGCGGCGCCACGGTGTACATCCAGCAGAAGACAACGGA
ACCTGTGCCGGCGGCGGACCTGGTCGGGCCGCCCCCAGGTGTGTGTGCCG
GGGGAGCGGCGGTGGGCAGATGTGGGAAGGCCGAAGGAAACATGTCTCTG
TTGTCACAATCTTTTCATCGTATCTGTATGCCTGTGTGGTTTGTGTATAT
GCTAAATTACATCATGCTGTTTTTTTTCCCTCTCTCTGTGTTCCTTTTTT
GCAATGTGCTCCACTCACATCCTGGGCTACAACCACTGTCTTCTTGAAGG
CCGCCTTGATATCTGAACACTTCGTCAGACAACGTGTCGCTACTGACTCA
CCGTGGACGCCCAGCTGCGCAAAGCCCTGCATGTTCTATTGCCCTGTGGC
CTCATCGCCATTTTTCAGTTATCTCTGCTATACACGCCTCTTCCGACAAC
CCACATATATTGAGGAGTGCATTGTCTCGTTCCGCAGGTCGGGAGGGTAT
CATCTAGACAGAGACAAATCCCCCTCTGATTTCGAAGCACGAGGTGCTCC
TGCCTAGCCCCTTTTTCGAGCTTGTATGGAAAGTAACTTCCACAAACCGG
CCTCATGAACAGTAGGTAGTGCTCATGTTTCAACAATCGCCACTTGCATG
GATCATCTATCGCCTGTACAGCTAACGTGAGGGTATTCCGCGCAGCCCCC
AGAAAGTTCTGAAGATCTCCCACAAGTTCTGAAGAACTTTTGCTGAGTAA
ACGCCTGCCAGTGATATGAACCCAGTTTAGCAAATCCGGGGACACACCGA
AACTGCCAAACTTTGCCATTGCTCGAAAGCAGAGGCGAAAGCTAGGCTCG
GGCCATGCTCCTCCGGGTAGAAACTAGCGCTCTACCGACTGCACCAGAAG
CGCTCATATACATATATAGATGAAAAAATATAATGATGATAACGAATAAT
ATTAAACAATAAACTAAAATACAAGCCAGGTATACTTCCGACTTTTTTAT
TACTTTTCACTCTGCATTTCATTCAGCTTCACATATGTAAATCTCTTGTT
GTCACAAGTTGTCATCGAAACTCTATGCCTGTCATTGTTGTGTGCCAAAG
TATATGTATGTTGTAAATAATTTCCAGGTATATTTCTGACTTTGATATAT
GTTGTATTGGTGTATATTAATATATGTTATTATTGCAGCCGTGGAAGATG
AACCTGAAGAAGATCCACCAACTGCAGCTGCTCCAGCTGATGGTGGTGAT
ATAGAGGGTGGCGAAAGCAACACTGTTATCGCACCAGAAGAAGAACATCC
AATAGTATCTTCCTGAGGAGTTTTGGGAGATGCCATCAACTTTTGTTACC
TTTCAGATGATAGTAGTTGTGATACAAATAAAAACTCTCTAAATGAACCA
GTCCTTTTTAAGCACCTTACAGCTTGGGTCGTGGCATGTTGACATACGTG
CTACTATTGTATCAATCTGCGACAACCCTTCTTGTGTTTTCTGTTGTATA
CAATTCTTGCCTCGTGATTGGTGGAGACTCATGAAGACTGGTAAGCTGAG
GCTTCGAACCTTTAACAATCGACTGTGATGAAGAACATTGCTTTCCTTTT
TTTCGTTGTTGTTGTTGCTAGCGGGCCTTGGTGACTTATGTTATCATAGA
AGAAGAAGATGTTGTTTTGTATATTTGAATAATCAATAATTATTACCAAA
ATATGGTTTGACTA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig11:1963164..1966027+

>mRNA_H-akashiwo_Contig11.53.1 ID=mRNA_H-akashiwo_Contig11.53.1|Name=mRNA_H-akashiwo_Contig11.53.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=288bp|location=Sequence derived from alignment at H-akashiwo_Contig11:1963164..1966027+ (Heterosigma akashiwo CCMP452)
ATGGCCAAGATCGCTGAGAAAGCAGCCTCTTTGAAAAAGGGCGCCATCTT
CATCACCTTCACTCGGCGGCTTCCCAGCACGCACTTTGAAGTCCTTGAGC
ACGAGATGTACCAGATGAGCTGGGGCGGCGCCACGGTGTACATCCAGCAG
AAGACAACGGAACCTGTGCCGGCGGCGGACCTGGTCGGGCCGCCCCCAGG
TGTGTGTGCCGGGGGAGCGGCGCCGTGGAAGATGAACCTGAAGAAGATCC
ACCAACTGCAGCTGCTCCAGCTGATGGTGGTGATATAG
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