mRNA_H-akashiwo_Contig11.33.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: A0A7S2UUK0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUK0_9STRA) HSP 1 Score: 179 bits (453), Expect = 8.600e-54 Identity = 81/152 (53.29%), Postives = 109/152 (71.71%), Query Frame = 3
Query: 69 KYVVTIFEAKDIVKMDLIGHCDPYFILRYGKVEAKTSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLNSEFFGKATVPLSEKPFDGWVEFWNHNKPGEKAADMKIRVKYMDPNANVQGGPQNQLGQHWDNVVRVTGRMFR 524
KYV+T+ E KDI+KMDLIGHCDPYFIL+YG EA+TSIK+NCSAA+WNE F FQ +D + LEIFGYDKD+L SEFFGK + LS PFDGW+ WN + G+K+A+++IR++Y DP ++ Q + +D V++ G++FR
Sbjct: 17 KYVITVVEGKDIMKMDLIGHCDPYFILKYGDYEARTSIKQNCSAALWNERFHFQEIDDIHV-------LEIFGYDKDLLASEFFGKVNIELSRIPFDGWIIMWNEKRSGQKSAEVRIRIEYFDPQDDLFLPTQQRALCCFDGFVKILGQLFR 161
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: A0A7S2UXQ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXQ8_9STRA) HSP 1 Score: 128 bits (322), Expect = 8.080e-34 Identity = 61/136 (44.85%), Postives = 87/136 (63.97%), Query Frame = 3
Query: 39 IKMAEANDGPKYVVTIFEAKDIVKMDLIGHCDPYFILRYGKVEAKTSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLNSEFFGKATVPLSEK-PFDGWVEFWN-HNKPGEKAADMKIRVKYMDP 440
+ M ++ P Y V + EAKDIVKMD+IG+CDPYF++RYG E +T+ K+N ++ VWNETF F + +DA E LEI+ YD++ S FFG+ + ++ PF+GWVE WN + K A +KI + Y DP
Sbjct: 35 LNMDNDSNTPYYTVKVQEAKDIVKMDMIGYCDPYFVMRYGSQEQRTTTKQNANSGVWNETFRFPVVDDAIEN------LEIYAYDQEANKSGFFGRCMLNIATSVPFEGWVEMWNPQDADHPKGASLKISITYNDP 164
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: A0A7S2UXI7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXI7_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.210e-33 Identity = 61/140 (43.57%), Postives = 86/140 (61.43%), Query Frame = 3
Query: 45 MAEANDG-----PKYVVTIFEAKDIVKMDLIGHCDPYFILRYGKVEAKTSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLNSEFFGKATVPLSEKPFDGWVEFWNHNKPGE-KAADMKIRVKYMDPNA 446
MAE N P+Y V I EAK+I+K+DLIGHC PYF+++YG + +T+IKEN WNE + F + D +EIF + K+M+NSE FGK T+ L+ P GW E +N KP + K A++K+ + Y +PNA
Sbjct: 2 MAEDNPASIESLPRYYVDIIEAKEIIKIDLIGHCSPYFVIKYGDQQQQTTIKENIDQGTWNERYTFYV------RDKSVRFIEIFAFSKNMVNSEIFGKVTIDLTHVPLAGWFEMYNTRKPDKPKGANLKLEITYENPNA 135
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: A0A7S2UTL2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTL2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.460e-20 Identity = 56/142 (39.44%), Postives = 76/142 (53.52%), Query Frame = 3
Query: 27 ILSGIKMAEANDGPKYVVTIFEAKDIVKMDLIGHCDPYFILRYGKVEAKTSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLNSEFFGKATVPLSEKPFDGWVEFWNHNKPGEKA-ADMKIRVKYMDPNAN 449
I + + + KY+VT+ EA D+ DPYF+LRYG + KTS K WNE FEF+ E+ G LEIFG+ K + EFFGKA++ LSE FDG VE + +K G +KI ++ +DPN N
Sbjct: 55 IFGNMTVQSKEEATKYIVTVHEATDLTNAP---DNDPYFVLRYGNRDLKTSTKGAAKQCTWNEVFEFE------EQAGGGNILEIFGFYKGGMYMEFFGKASILLSES-FDGSVELVDPSKFGSSTNPSVKISLQKIDPNGN 186
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: A2D7F1_TRIVA (C2 domain containing protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2D7F1_TRIVA) HSP 1 Score: 68.2 bits (165), Expect = 4.280e-11 Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 3
Query: 78 VTIFEAKDIVKMDLIGHCDPYFILRYGKVEAKTSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLNSEFFGKATVPLS 344
+ I EAK++ KMD+IG CD Y L +G KT +KEN VWNETF+F + N+ D L + D+DM E F K T ++
Sbjct: 5 IKIIEAKNVPKMDIIGSCDAYVALTFGSKRYKTGVKENTLNPVWNETFQFPIQ---NQNDI----LTLIVSDRDMTTDEDFAKLTFHIN 86
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: A0A0L0TEH0_ALLM3 (C2 domain-containing protein (Fragment) n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0TEH0_ALLM3) HSP 1 Score: 68.2 bits (165), Expect = 3.040e-10 Identity = 38/132 (28.79%), Postives = 65/132 (49.24%), Query Frame = 3
Query: 69 KYVVTIFEAKDIVKMDLIGHCDPYFILRYGKVEAKTSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLNSEFFGKATVPLSE-------------KPFDGWVEFWNHNKPGEKAADMKIRV 425
K V + EA+++ D G DP+ IL +GKV+A+T+++ VW+E F+F + PP L++ +DKD++ ++F G VPL+E +P W+ + DM++RV
Sbjct: 4 KLRVHVVEARNLAAKDANGFSDPFVILEFGKVKARTTVQYKNLNPVWDEPFDFDVPYP------PPLGLKLTVWDKDLVVNDFLGVCRVPLAEIPQFAPGADLAEEEPDGAWIPLQKRKDNNIISGDMRLRV 129
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: A0A0L0TF85_ALLM3 (C2 domain-containing protein (Fragment) n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0TF85_ALLM3) HSP 1 Score: 68.2 bits (165), Expect = 5.780e-10 Identity = 38/132 (28.79%), Postives = 65/132 (49.24%), Query Frame = 3
Query: 69 KYVVTIFEAKDIVKMDLIGHCDPYFILRYGKVEAKTSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLNSEFFGKATVPLSE-------------KPFDGWVEFWNHNKPGEKAADMKIRV 425
K V + EA+++ D G DP+ IL +GKV+A+T+++ VW+E F+F + PP L++ +DKD++ ++F G VPL+E +P W+ + DM++RV
Sbjct: 4 KLRVHVVEARNLAAKDANGFSDPFVILEFGKVKARTTVQYKNLNPVWDEPFDFDVPYP------PPLGLKLTVWDKDLVVNDFLGVCRVPLAEIPQFAPGADLAEEEPDGAWIPLQKRKDNNIISGDMRLRV 129
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: A0A077WEB3_9FUNG (C2 domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WEB3_9FUNG) HSP 1 Score: 64.3 bits (155), Expect = 1.540e-9 Identity = 41/136 (30.15%), Postives = 66/136 (48.53%), Query Frame = 3
Query: 69 KYVVTIFEAKDIVKMDLIGHCDPYFILRYGK-VEAKTSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLNSEFFGKATVPLSE------KPFDGWVEFWNHNKPGEKAADMKIRVKYMDPNANVQ 455
K VT+ EAKD+ K D++GH D Y K + KT EN S+ +WNET F + E+ +L I DKDM +S+ G+ + +S P D W+ H +K + ++V+++ N + +
Sbjct: 12 KLSVTVVEAKDLKKEDVVGHNDVYVEAWLNKNYKQKTGTHENTSSPIWNETLMFPV-----EKGDKDNKLYIRVLDKDMADSDKIGEGKLDISNLYKEGASPIDEWISLPTHFHLSDKGK-VHLKVEFVPENESAR 141
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: A0A2T7PR64_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PR64_POMCA) HSP 1 Score: 63.9 bits (154), Expect = 2.950e-8 Identity = 41/104 (39.42%), Postives = 55/104 (52.88%), Query Frame = 3
Query: 78 VTIFEAKDIVKMDLI----GHCDPYFILRYGKVEAKTSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLNSEFFGKATVPLSEKPFDGWVEFW 377
V I EAK+++K D+ G DPY +L G E KT + N VWNE FEF +DE DG +L++F DKD + GKA+V +S G V+ W
Sbjct: 303 VHIVEAKELIKADISILGQGKSDPYVVLTVGAQEFKTKVINNTLQPVWNEVFEFIVDE----RDGQFLKLDVF--DKDPNKDDPLGKASVDISTIFKKGNVDEW 400
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Match: D8QZA7_SELML (Plant synaptotagmin n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QZA7_SELML) HSP 1 Score: 63.2 bits (152), Expect = 4.930e-8 Identity = 41/148 (27.70%), Postives = 73/148 (49.32%), Query Frame = 3
Query: 69 KYVVTIFEAKDIVKMDLIGHCDPYFILRYGKVEAK---TSIKENCSAAVWNETFEFQLDEDANEEDGPPTELEIFGYDKDMLN-SEFFGKATVPLSEKPFDGWVEFW-------NHNKPGEKAADMKIRVKYM--DPNANVQGGPQNQ 473
+ VV + +AKD++ MDL G DP+ L + A+ T +N VWNE FEF++++ A ++ L + +D+D + SE G VP+ E E+W + K + +++ + YM D ++ +GG ++Q
Sbjct: 264 RLVVKVVQAKDLLNMDLFGKSDPFAQLFIRPIPARRKRTKTIDNDLNPVWNEVFEFEIEDPATQK------LFVHIFDEDSVQASELIGSTQVPVRELQPGSLTEYWLPLVKDLGNKKENKYRGQVQLELLYMPLDVDSRPEGGTKSQ 405 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.33.1 >prot_H-akashiwo_Contig11.33.1 ID=prot_H-akashiwo_Contig11.33.1|Name=mRNA_H-akashiwo_Contig11.33.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=163bp MAEANDGPKYVVTIFEAKDIVKMDLIGHCDPYFILRYGKVEAKTSIKENCback to top mRNA from alignment at H-akashiwo_Contig11:1226976..1227913- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig11.33.1 ID=mRNA_H-akashiwo_Contig11.33.1|Name=mRNA_H-akashiwo_Contig11.33.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=938bp|location=Sequence derived from alignment at H-akashiwo_Contig11:1226976..1227913- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig11:1226976..1227913- >mRNA_H-akashiwo_Contig11.33.1 ID=mRNA_H-akashiwo_Contig11.33.1|Name=mRNA_H-akashiwo_Contig11.33.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=489bp|location=Sequence derived from alignment at H-akashiwo_Contig11:1226976..1227913- (Heterosigma akashiwo CCMP452)back to top |