mRNA_H-akashiwo_Contig11.17.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig11.17.1 vs. uniprot
Match: A0A7S4DEH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEH3_HETAK) HSP 1 Score: 652 bits (1683), Expect = 1.370e-226 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1
Query: 28 METNFPPSNELKLSANSVENSVRRIQATWRRLFKTQEKNQSAGGGCLPHPASESCLSDVSGTEEVKEMCLICYENVAENKIKKNICGPDCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIPETELPSNPEQHLKNTLKPLLENEHAGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLLTCASCGL 975
METNFPPSNELKLSANSVENSVRRIQATWRRLFKTQEKNQSAGGGCLPHPASESCLSDVSGTEEVKEMCLICYENVAENKIKKNICGPDCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIPETELPSNPEQHLKNTLKPLLENEHAGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLLTCASCGL
Sbjct: 1 METNFPPSNELKLSANSVENSVRRIQATWRRLFKTQEKNQSAGGGCLPHPASESCLSDVSGTEEVKEMCLICYENVAENKIKKNICGPDCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIPETELPSNPEQHLKNTLKPLLENEHAGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLLTCASCGL 316
BLAST of mRNA_H-akashiwo_Contig11.17.1 vs. uniprot
Match: A0A7S3UWB4_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB4_HETAK) HSP 1 Score: 288 bits (736), Expect = 1.020e-88 Identity = 136/270 (50.37%), Postives = 180/270 (66.67%), Query Frame = 1
Query: 166 LPHPASESCLSDVSGTEEVKEMCLICYENVAENKIKKNICGPDCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIPETELPSNPEQHLKNTLKPLLENEHAGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLLTCASCGL 975
+ H + S S T E C +C + V ++ I K +CGP CPL +C +C +HFE IV + YDGIL+KMTCP CISM VPS W+ F D L LFQRRAAILLSLQC+GCH+RKDLFI + LP++ ++H++ L+ +E + ALG F G NE+ FFQ + FP +F ++ PD GPW +P+LLS+RDAR RAVLHLRYLR PK +T CC+ QCFRCRTG+WH GQTC++V AA +Q+S++LTC +C +
Sbjct: 47 VAHEIATSSSSPEHTTHTTTEECQVCLDEVPQSLILKELCGPKCPLVACKSCASSHFEGIVSESYDGILRKMTCPSCISMEVPSSTWANFTDPEMLALFQRRAAILLSLQCAGCHTRKDLFIQDQSLPTDADKHMEGIETMLVASEKR--DAFSQALGLFTSGSINEEDFFQLICITLFPDQFQSSS-PDEGPWEDVMKPILLSIRDARQRAVLHLRYLRSFPKCSTPCCKRVQCFRCRTGQWHEGQTCSQVLAAQFQNSEVLTCPACAI 313
BLAST of mRNA_H-akashiwo_Contig11.17.1 vs. uniprot
Match: A0A7S4D641_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D641_HETAK) HSP 1 Score: 194 bits (494), Expect = 1.590e-55 Identity = 107/299 (35.79%), Postives = 151/299 (50.50%), Query Frame = 1
Query: 121 LFKTQEKNQSAGGGCLPHPASESCLSDVSGTEEVKEM-----------CLICYENVAENKIKKNICGPDCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIPETELPSNPEQHLKNTLKPLLENEHAGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAA---ASYQHSDLLTCASCGL 975
+F T + + G + L SG +EV M C IC E ++ +++ + CG DCPL +C C+ HF+ + GYDGIL+KMTCP C+ +VP W P ++ L+ RRAAILL+LQCSGCH RK + E E P + +K +E + RF G+ N+ ++++ T FF + PW +P+L +RD RA L+LRYLR +PKV+T CC+A QCFRCRT WH G TC E+ A D+L C C +
Sbjct: 32 VFSTTTRQINENGEKTTRVVPTTTLLPTSGIQEVSVMELKLQPEVQDDCDICLETLSSLELEYSFCGSDCPLKACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILPDEDENQVLPTDGMPKAVK----------EELLMEFERFNDGKINDQELYERISTYFFSFENLP------NPWLVM-QPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDI 313
BLAST of mRNA_H-akashiwo_Contig11.17.1 vs. uniprot
Match: A0A7S3XSF2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSF2_HETAK) HSP 1 Score: 167 bits (424), Expect = 7.610e-46 Identity = 89/228 (39.04%), Postives = 122/228 (53.51%), Query Frame = 1
Query: 301 LTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIPETELPSNPEQHLKNTLKPLLENEHAGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAA---ASYQHSDLLTCASCGL 975
L +C C+ HF+ + GYDGIL+KMTCP C+ +VP W P ++ L+ RRAAILL+LQCSGCH RK + E E P + +K +E + RF G+ N+ ++++ T FF + PW +P+L +RD RA L+LRYLR +PKV+T CC+A QCFRCRT WH G TC E+ A D+L C C +
Sbjct: 40 LIACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILPDEDENQVLPTDGMPKAVK----------EELLMEFERFNDGKINDQELYERISTYFFSFENLP------NPWLVM-QPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDI 250
BLAST of mRNA_H-akashiwo_Contig11.17.1 vs. uniprot
Match: A0A835YLL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL2_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.610e-32 Identity = 87/231 (37.66%), Postives = 118/231 (51.08%), Query Frame = 1
Query: 292 DCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDL--FIPETELPSNPEQHLKNTLKPLLENEHAGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLL-TCASCGL 975
D +C CL +F +IV +GY+G+ +M CP C + VP WS V+ T LF++RAAILL+LQCS CH+R L F + ++ E+ L L L AG + + R D + A + P + A WA R VL ++D RAVLH R+L HP V T CC A C+RCR G H GQTCAE AA+Y +L+ TC +C +
Sbjct: 116 DSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFC-PLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLMEFAHYSAGSADFERALPGALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALM-REVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSI 344
BLAST of mRNA_H-akashiwo_Contig11.17.1 vs. uniprot
Match: A0A482RY51_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY51_9ARCH) HSP 1 Score: 81.6 bits (200), Expect = 1.740e-13 Identity = 67/221 (30.32%), Postives = 97/221 (43.89%), Query Frame = 1
Query: 334 FESIVKQGYDGILKKMTCPGCIS------MTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFIP-ETELPSNPEQHLKNTLKPLLENEHAGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLLTCASCGL 975
ES ++ Y G + CP + +P W + A + A LL+ C GCHS K L + E+ +N Q L L N E A+ + G D F++ L FF + + D +A W + +L + D RA LHLRYLR+ P++ T CC CFRC+ +H G+TC E S HS ++ C SCG+
Sbjct: 1 MESKIQSAYMGTCPIIHCPSTMHHKSKKRRVIPYTKWKEALPAEISTKYNSLANSLLAFLCGGCHSLKSLDLGHESNRSANCYQQLARNLSDSAGNCKMAALE--TAVESYCLGGILVDEFYEDLLKSFFT-RLTSLNDAEA--WEQFS-DLLRIIPDPERRANLHLRYLRDRPRIKTLCCSREHCFRCKIKDFHEGKTCMENTE-SLDHS-IVCCPSCGI 213 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.17.1 >prot_H-akashiwo_Contig11.17.1 ID=prot_H-akashiwo_Contig11.17.1|Name=mRNA_H-akashiwo_Contig11.17.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=316bp METNFPPSNELKLSANSVENSVRRIQATWRRLFKTQEKNQSAGGGCLPHPback to top mRNA from alignment at H-akashiwo_Contig11:533880..535041- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig11.17.1 ID=mRNA_H-akashiwo_Contig11.17.1|Name=mRNA_H-akashiwo_Contig11.17.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1162bp|location=Sequence derived from alignment at H-akashiwo_Contig11:533880..535041- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig11:533880..535041- >mRNA_H-akashiwo_Contig11.17.1 ID=mRNA_H-akashiwo_Contig11.17.1|Name=mRNA_H-akashiwo_Contig11.17.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=948bp|location=Sequence derived from alignment at H-akashiwo_Contig11:533880..535041- (Heterosigma akashiwo CCMP452)back to top |