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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 165 |
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Cds size | 165 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681387077.0623865-CDS-H-akashiwo_Contig11:5554315..5554429 | 1681387077.0623865-CDS-H-akashiwo_Contig11:5554315..5554429 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig11 5554316..5554429 - |
| 1681387077.0708437-CDS-H-akashiwo_Contig11:5563960..5564011 | 1681387077.0708437-CDS-H-akashiwo_Contig11:5563960..5564011 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig11 5563961..5564011 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.130.1 >prot_H-akashiwo_Contig11.130.1 ID=prot_H-akashiwo_Contig11.130.1|Name=mRNA_H-akashiwo_Contig11.130.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=55bp
RALAHLGGALACGQLLEALPDDAGLEEALPLVRASLQRPRGTRRSGGGSA
ARLL* back to topmRNA from alignment at H-akashiwo_Contig11:5554316..5564011- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig11.130.1 ID=mRNA_H-akashiwo_Contig11.130.1|Name=mRNA_H-akashiwo_Contig11.130.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=9696bp|location=Sequence derived from alignment at H-akashiwo_Contig11:5554316..5564011- (Heterosigma akashiwo CCMP452)
AGGGCCCTGGCCCACTTGGGCGGGGCGCTGGCGTGCGGGCAGCTGCTCGA
GGTGCGATCTACGGTAATAGTTTTCATTGGCGCTCTGGCAAAAGCGGTAA
TAGTACACAGGCAAGTACGGTAATACGTTGTGTAGGCAGTCAGGCAGGTA
ATGGACTGCAAACTTGAGTTTGGTTACCACTGCTAACCGGCCCTGAATAC
ATAGGTATAGAACTACTAGATGTATAGGTTGAACAGAGCCTCCTTAGGAG
GCTCGCTGAAGAAGCCATTATTATTGTGGTAATGATTAAGTACATCAATG
ATGGTGGTAGTAGAAGAAGAAGAACAAATGATGATGATGATGATGAATGA
TGATGGAAGAATACTAATAATAAGTAGTATTAGGAATGTCCTGGGAGACA
AACAACGCCCCCCCAGACCAGTACAATCATGCATAGAAAATATGTGCAAC
AACAAAAGAATACAAGGGTCATGCAGAATCAAAGCCATGATGAAGCACAT
GCTGGCGCCTTCCCAAAACTTCAGCATTCAGGGCCTTGGTGAAGATATCT
GCCAACTGGTATAGCACATCTGGAGGGTACCCAGGTTCACTTGCTCCTTG
GCCAGGTGGTAGGACACATGAAAGTGCCTATTCTTCCTTGAGCCAACCAT
GCCATTGGCCCATTCATTACAGGCAGAATTGTCCTCAACGACTGGAGTAG
GTTCAGGCTGAGGGCAGCCAAGATCTGCAAGAAGATGCCTCAGCCACATG
ATGTCTTTAATAGCAGACCTCAGTGCCAGGTACTCAGCCTCCACAGTAGA
TGTACTGACTGCAGTTTGAAATTTTGAAGACCACACAATGGGTGAGTCAC
CAAGCATAATAATATAGCCTGTCACCGACTTGCCCTGCTGCCTGTCCTGA
CAAAAGTCAGAGTCAGTGTAGGCCCGAAGAACAAGATCTCCACCAAGGCG
CAGCTGTTCAGACTGAGTGCCCTTGAGATATCGGAAACTACGCTCAGCGG
CCTCGAAGTGCTTAGGCTCAGGGTAACCCTGTGACCTCTGAAGCTTATGC
ACAGTAAAGGCGAGCTCCGGCCTGGTCCAGTTAGACATCCATTCCAAAGT
TCCAACCATGGAACGGTATCTGTTCGCATCTGGCAAGGAACAGACACACC
CAGGGGTAGGGGACAGATCAGCTGTGTGATCCATGGGAGTGCGAACAGCC
GGAAGGAAGTGCACAAACCAAACTTAGTGATGGCGTCTTTAACGAAAGAA
GCCTGGCTTAGGAAGAAACACTTATATTGCGATGATCCCTGACCACCTTG
ATGCCCAGGATTTGATTAAGAGGACCGAGATCTGTGATCTTGAACCGAAT
ATACCCAATCAAAGCACCAGAGCAAAAGACCAACGAATCAAAAAACCACA
AAGCGGTTGAAACCACTCATGCGAGAATGGCAACTGCACGATGAAAAAAC
CGAGAGATGAAAAAAAGGACGTGGCGGCGGCTATCACGAAATAACATCCT
ATCCGCGATCACGGCATAACGAAAAAACAACCACCACGTAGTCCCTGTCC
CCGGACCGAGAAAACCGACAATATGAAAAGTGCCGCAGCAGAGGTAGCCA
AATAGGCTTCAAATCTCTGCCCTTTTGGATACTGCAAGTGTTCTCCACCA
TTGCAATATACATGGCCTTTTTCTTCAACCTCTTACCCCGGTGGGTCTCT
CTGCACAGCACCTCAGCATTATCAAAGTCAAACCGATGAGAGAAATCAGT
GTCCAAGCAGTGAGTAGGCAAACCAGTGTCATTCTTTCCTTTTCAGTCAA
CAAACAAGAAAGTCTTGGCTACATCTACTGACCGACTATGCTCCTTCACC
CTGGTGGCTATAGCATTCTACTGGTCTGACCAACATAACTAACAATCGAG
AGATTGCCGGGGGGATGTCGACGTGAGACGAGAATTATCACGGCCTGACG
GAAGTATCCCACAAGTATCGGACCGGTGAGATTACGGTAACAACCTTGAA
AGTACAACAGCCTGTCAAGGATATGGGGATGAACCGCATCCTGAAAAGCA
TGATGGTACTACATTGACCAAAAAAAAAAAAAAAAAAAAGCATTTATTTG
TTTCTTTTTTGGCGTCGTGGGGTGTTTATAATTCAACTGTTAACTACTTT
ATTGTCAGAGCTCTAAAATTGTATATCAAGCCCACTATATATTCTGATGA
TGTGTATATGATGATGTTGAAATTTGTTTTTTTCGCCACTCAGGGGTGCA
AACACTGTTTTTTGTATCTAAAAGGAGGTTGATTTTTACTCATGTTCCTA
AGGGCAGAAAAAAAATCAAATGTTTTGCACCCCTTTGGGGCAAAAAGCAA
ATTTCGCCGCGCTCAGGCATCTTGCTCTGGACAGCTGTAGATTCTTTGGC
GGCAATCGCTGTTTAATCGCTATGATCCAGCGCTGACAGGGTAGATCAGT
CAGGCATGGTGCGTTATCCATTGACAGCCACTGCCTAGTGCGTATTCATT
CTACTTGTGCGTCAAGAGTCCCCAGCTTTTGTGCACCCCCTCTGCAGGGC
TTTAACACTCAAGATTCCTGATCGTCTAGAGCCTCGGATTTTCTCCACAA
CAAATCCATAATATGCTGTTCGCCGCCAAAATTAGTTTCGCATCCACCTG
ACCATTGCCAATCAACGTTGTCCCACAAAATGGCTTTGACGACATCCCCG
TTCATCCGTCATTCTCAGCCTCGATAAAAAAAAGGAATGGGACTAGTAAT
CTTTTCACTTTTACCCCACTCACGCGGACAAATCATTTTTGTTCATTCTA
CGACCTTTGCGAATCAAATCATCGAAAGTTTCAATTGATCCTTGTTCTTT
TCGGTCCGTGAAATATATTGGTGAATTTATAGAAATATTGTGTTAATTTA
TAGAAAATGATGTGAATTTATAGGGAATTATAGCCTCTCGAGCCAATCAG
CTGTGTGAATTTATAGAGATATTTGGTGGTGTCGGTCTGCGACCCGAATT
AAAACAAAAAGGGATTTCTATAAATTCACATCGCTGATAGGCTACATTCA
CATATTTTTCTATATTTTCACCAATATATTTGGAGGTGTTCTATAAATTC
ACCAATACACTCCCTCTCTTGAATTTCAAAGGTCCCTAAGCCCGTCATCG
AATTGCTATATTTTTTAGGAGGAGCCGCTGCTGCTTCTAGAGACGTATCA
AAAACGTATTTGCAAATTTGGCCAAAGTTTTGGAACTTTGAGGATTTTCA
GCGTCCATGTACTCTACTTCCTTTTCTATATAGAGGAGGAATTAGAGAAA
AAGGAGAGTGAGAGATGTTAAGGGGATGGGTTTCACAAATTAGATTGTTT
TTTTTTTTTGAATTTCATCATTTTGGGGGGAATTTCAGAAACAAATGGCC
ATTTCAAATTATCATAATTCCAAACATTCTTTGGAAATTCCACAAAATCA
TCGTTTTTTTGGTAAATTCCTAGCTGGTGCTGATGATACAGGTACAAGAA
CAATAACAATAAGGCTAACAAGAAGAAGAGCACCAACCAACTCATTTTTT
CCGCCGCAACAAAACAAAACAATCACTTTCTCTTTCTAGTGGGTTGATTG
CAGCTTTGCGACTAAACATGGGGAAAAAGAATCGTAGCAGCGTTGGTACG
GAGGCTTCACCTCCGAAGAAGGTAAAGAAGGCAGCCAAAAAGGATTCGGC
TTCGAAGGAGGCTTCACCTCCGAAGAAGGTAAAGAAGGTAGCCAAAGAGG
CTTCGGCTTCGAAGGAGGCTTCATCTCCGAAGAAGGTAAAGAAGGTAGCC
AAAAAGGCTTCGGCTTCGAAGAAAAAATATTCGGGGAGGCAAAGGGACAA
GAAGAAGGTGAAGACGCCCTACAAAATAAAGGATATCATTCAGCTTCTGC
AAAGTCCTGAATTAATATACCTCACTGGCAACGGGAATCCATGTTGAGAA
CAGTGGCTCACTTGAAGCTTGCTCTCGCTGGCGGCAAAGGTAAGGCGACC
AAGGCCCAAATAAGAAAGGTCCTCGACGATCACTTTCGGATAACTTTGGC
AAATTGGCGAAGGACACAAGAGGTAAATGGTGAGGTGCCTGATGCCACCA
TACGTTTGGGTGTGCAGAACTTGGAGGAGAGATTGATGGAAGAAGATCTC
AGTGCTGAGGAGCTCGATGCAGGAGGCCCGGTCGCTACCAAACGCATCTG
CAGAGCAAGACTAGTTACTGTGTTGGGCAGTGACCAATGCAAGGAATTGC
TGAACGCGAACCTGGGGGATATGCAGGGAAAGGCCCAACCTTGGGATCTT
AACTGTGGGACACTGCGATGGGGCCATCCTTTCTGGCTGAAGGTTGGTGA
GTTATTCAACCAAAATGATCTTTTCAACTCTATACTTGAAAATGACCCCA
TTGACGACGTCGTTGCTGCAATGGGAAAGGATGCCCCCAACAAGATTTTG
GAAGGAATACAACATTGCCCATTGGTCAAAAAGCTCACACCAAAGGAGCT
GTACGAGATGTTCCAAGACATTCGAAAGCTGTACCAAACTGCTTTTCAAA
ATTGCAGCAGATCTGGTAATCATCAACAGTTCTGGAGCTACTGTAACAGA
GATGCTGTCGTGGGTTACTTTTACAAGCTGGCACACGGGGATGTCCCTGA
ACTCCACTCTGTTGCAGCTGCAAGCCTTGGTAAAAGTCAAGAGTTTCAGT
CACCCTTGGGCAACGTTGGTGATGACGACACTGCACCTCCCCTTCCTTCC
ACAGAAGAAGAAAATAAAGGTAAGGGTGGTACTACCAACGAGCTGTTAGA
TGTTCTGAAAGATATGAGCAAGGAAAAGAAGGTGGAGGACAAAGTGAAGC
AGCGCCTTCACCTCAGCACCCAGTACTCGATTCTTTCTGCTGAGAAAACA
AAGTTTGAAGATAGGCTGTTGATGTTGTGTTCTACGAAGGGGGACGAAAA
GCTGTTGGCCAGTATGAAGGAGAGCTGTCTCAAGTCTCTTGCATTTGTCA
CCAGGCAGCTTGAAACGATAATGAAGGAGATGGACCACCTCACTGCTTCT
TCTTCTACGAATTAGATGGTAATTGACTGTTGTTGTTTGGGACTGGGGTT
AGGGAGGGGGGGGAAAGAGGTTGTTTGTAAACGTGGATGTTAGGGGGGGG
GTTGTTTGACTCCAAAAAAAAAAAAAAAAAAAACTCCCATTTGGGAGTTG
AAAAAAAAATGACTATTTTACTATGACAATGATGAGTTATTTTACTTGTG
CGGTTTCTACTGCTGGTGCCCCTTCTTCATGCGGTGGCGTGTAGGCAGGC
AGCACCACGAGCAGCAGCAGCAGCCGCCGCCGTGCTCACTCATTTTTTTT
TTCCCGTGTGCTAATGATAATAATAATAATAACAACCTGTACAGTAGTAG
TAATTCATCATCATATTATATTATTATCTCGTTTTTATTATTATCTTCTC
TCCTGTTCTTTGAGCAGCTCAAAGAAGAACAGGAGGAGATAATAATAATA
ATAATAACAAGATGATATGATGATGAATTACTACTGTAGTACTACAGGTT
ATCATCATTATCAATATCTTCTCGTCTTCTTCGAGCTGAAGATGATGGAG
ATGATGAGCGCCGATCCCTCCATCATCATCAGCTCGAAGAAGAAGCGAAA
TATTTCGACCTGTTGTAGTGGTGATGATGGTAAGTATGTACTTCTCCTTC
TCTTTTTTCCAATTTTTTTTTTTTTATGAAGAAGAAGAAAGAAAACCAAG
AAGCGCACAAAGGAGAAGGAGGACCGCACGGCGGCCGCTGCTCCTGGTGG
CTGGTATTTAGTAGGCAGGCTGCCCCACCAGGAGCACAGCGTCCGCCGTG
CGGTCCTCCTTCTTCATCATGCGAGGCGGCGCCCACGGATGGGGTAGTCG
TTCTCTCCGCCCTCAGGGAGGGCGGCCCTAGGCTGTACGCCCGCGGGGGC
GGCGCCGCCGTGCTGACCGCCCGCGGGGGGGGGTGTGGCGGCGGAGCCTT
CTCCGCCTGCTGGGGCGGCGGGCCCCACGGATGGGTTATCGTCCTCTCCG
CCCGTGGGGGGGTTGGCGCCGGGCTGTCCGCCCGTGGGGGCGGCGGCGGA
GCCTCCTCCTCCTCCTCTTGGGGCGGCAGCCCCCACGGATTGGTTGCCGT
CCTCTCCGCCCTCAGGGGGGGCGGCGCCGGGCTGTCCGCCAGTGGGGGCG
GCGGCGGAGCCTCCTCCTCCTCCTCCTCCTGGGGCCGCGGGCCCCACGGA
TGGGTTGTCGTCCTCTCGTCCCGCAGGGGGGCGGCGCCGGGGTGTCCGCC
CGTGGGGGCGGCGGCGGAGCCTCCTCCTCCTCCTCCTCCTGGGGCCGCGG
GCCCCACGGATGGGTTGTCGTCCTCTCGTCCCGCAGGGGGGGGGGGGGGT
GGCTTCTTATTAATGATTATTATTTCCTCTTCTTCTTGGAGCTGATGATG
GAGAGATCAGCGCTCATCATCTCCATCATCTTCAGCTCAAAGAAGAAGAC
GAGGTAATGATAATAATTAAAACCTGTATGTAGTATGTAGTAGTACATTA
GTAATTCATCATCGTACCATCTTGCTATTATTATGATTATCTGTCCTCCT
GTTCGTCTTCGAGCTGCTCAAAAAAGAACAGGAGGAGGAGATAATAATAA
TATTAATTACAAGATAATATGACGATGATTACTACTGTACAGGTTACTAC
TGCTCCTGGTGGCTGGTATGTAGTAGGCAGGCTGCCCCACCAGGCGCACA
GCAGCCGCCGTGCGGTCCTCCTTCTTCATCATGCAGGGGTAAGAAAAAAA
AAAAAGCGAGCATGGCGGCCGCTGCCGTGCGGTCCTCCACCTCCTTCTTT
TTTTTTTATCCCTTCTTCTTCTTCTTCCTTCACAAAAAAATGAAGAGAAG
GAGGAGTACTACTTATCATCATCACCACTACAACAGGCCGAAATATTTCG
CATCTTATTAATTATTATTTATTATTATTATTATTATATATCCTCTTCTT
CTTGTTGGAGCTGATGATGGAGAGATCAGCGCTCATCATCTCCATCATCA
TCTTCAGCTCGAAGAAGAAAACGAGGTAATGATAATAATAAAACAAACCT
GTAGTATGTAGTACATTAATTATTAGTAATTCATCATCATATCATCTTGT
GATTATTATTATTATCTCCTCCTGTTCGTCTGCGAGCTGCTCGAATAACA
GGAGGAGGAGATAATAATAATAACAAGATAATAATATGACGATGATTTAC
TACTGTACAGGTTACTACTGCTGCTGGTGGCTGGTATGTAGTAGGCAGGC
TGCCCCACCAGGAGCACAGCGGCCACCGTGCGGTCCTCCTTCTTCTTCAT
CATGCGAGGGGAAGGGGGAAAAAAAAAGCGAGCACGGAGGCCGCTGCCGT
GCGCTCCTCCACCACTTCCTTCTCCTTTGTGCGCTTCTTGTTTTTATAAC
TTATTCTTCTTCCTTCACCAAAAAAAAAACAATGAAGAGAAGGAGGAGTA
CTACTTATCATCATCACCACTACAACAGATCCAACAACAATTCAATAACT
ATATTTTATTTTTACTTTTAAAAATTTTATTTCATTTTCCTCTTTTTTGA
AGTTTCAAGAGCGAGCTGGCTGTGTACTGGGCGTTTCAATCCTGCAGCCT
CAATATCATTGGCAACCACTGTTCTCATTGTGTAGCAAGCACCTTTTTCT
GGAGACCTCTCTGGCTCATCTTCATCAAGGTGAGAAGGCAGGAAGCCCTT
GGGGAACACCTGGTTAGAGAACTGAACATTGCCGTTCTCATCAAGATCAT
CATCTCTTACTTGATGGAGAAAGGGTTCACACACCTCAGTAGTCGGAACA
GAAAGATCCAAGTCCCTTTTCATTTCTTCTTCTCTCTCTAGCCTCCTATC
AATTACAAAGTTGTGCAGCTTCATGCAAGCTGTGACTAAGCTACCTACAT
TATTCAAGCTGACTGTTAGTGCTTTACGAAGAATCTGCCATTTTTGAGTG
AGATAGCCAAAGGCCATTTCAATCCTGATACGTAACTGTGAAAGGTAAAA
GTTGAAAGCGCTTTCCTCAGGAGATAGATTGGAGGCGCGGAAAGGGCTGA
GAAGCTGTTTGGTGCAAATGTAGGCAGCATCCCCTAAGAGATAGAAAAGT
GGAGGCAAATTGTTATGCAAGTAGCTGTCAAGCCCAGAAGCAGCGAATGC
CCTGCTGTCAGAAGCCTGGCCTGGAAGTTTGATGCTAACAAAAATGAACC
TGCATTTTGAGTCAGCCACAGCTTGGCAGTTGAGTCCATAGCAGTGGTAG
TGCCCAGAATAGTAGTCAATGCAAGTCCCGTTCGCAAGGTCCCTTGGCGT
AGGACAAATGATTTCGACCAGCAGGCCGTCGATGACACCTACACAGCCGG
TTATTATATTCATTGTGCTGATGGCTCTGAAACCAGCCGCTAATTTCTCG
TAGCCTTCTCTTTTGCTAGGAAAGCGGATTTGAAGGGAAGGTGAAGAATG
GATTGCTGAAATGACTCTGTCCTTGATTGTGTAGAAGGATGCAATAGATA
CACCAAAAAGACAATATAAATCGTGGCAAGATCCACCAGCAAGCCATCTA
ATAGTCATAGCGACCTGGAGAGGGACCTCAATGTCTTCGAACTGGTTTTT
TGATCTCACGTGATTTGGTAGAATGTGTGGGGCGAGCATCTCGCAGAGAA
CGAGAAAATCAGAGTATTGCATTCGGTACATTGGGTGGAAAAGCCCCTCG
TTGAGTAAAGTGTTCACATGCTCTTGCCAGTCAAGTCTTTTACGTAACAT
GAGTTTTCTCCGAGTCCTTTTGCCTTCAACCTGGCTTGCCTCAATGTAGC
CCGCCAACATTGCTGTGAGTGAAACATCGTGCTGCACCAAACCCGCTTCG
CAATTTTCAACGCGTTCCAACAACTCAAGTGCAAACTGACCAGACACATG
GCTTTTGATATCAAATAGAGGACCACTGTAAGCCATTTGTCGTCGCTGTA
ACCTGTGTGTCTGGTCAGTTTGTTCGATTTTGATCTATACTAGTCACTTT
TTATACTTTTTTTATAGTAGTAGGAGGAGGAGGAGAAGGGGCGCGGGGAG
GAGGAAAGAAGCAGCAGCACGGTGTACTATACTATCGCGTGTATACATGA
TTTTTATAAAAAATCATGTATAGTAAAGATCGCGGCCGTCTAGCCTATCA
GCGATGTGAATTTATAGAAATCCCCTTTTTTTTTTTTTTTAATTGGGGTC
GCAGACCGACACCACCAAATATCTCTATAAATTCACACAGCTGATTGGCT
CGAGAGGCTATAATTCCCCATAAATTCACATCATTTTCTATAAATTAACA
CAATATTTCTATAAATTCACCAATATATTTCACGGACCGAAAAGAACAAG
GATCAATTGAAACTTTCGATGATTTGATTCGCAAGGTCGTAGAATGAACA
AAAATGATTTGTCCGCGTGAGTGGGGTAAAAGTGAAAAGATTACTAGTCC
CATTCCGTTTTTTTTATCGAGGCTAAGAATGACGGTTACATCTATTATAT
GACTCACTTTTGTGGCGGTGTGGGGGGGGCAGGCCCTGCCGGACGATGCC
GGGCTGGAGGAGGCGCTGCCCCTTGTACGGGCCAGTCTGCAGCGGCCACG
CGGAACGCGGCGCAGCGGCGGGGGAAGTGCCGCCCGTCTACTTTAG back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig11:5554316..5564011- >mRNA_H-akashiwo_Contig11.130.1 ID=mRNA_H-akashiwo_Contig11.130.1|Name=mRNA_H-akashiwo_Contig11.130.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=165bp|location=Sequence derived from alignment at H-akashiwo_Contig11:5554316..5564011- (Heterosigma akashiwo CCMP452)
AGGGCCCTGGCCCACTTGGGCGGGGCGCTGGCGTGCGGGCAGCTGCTCGA
GGCCCTGCCGGACGATGCCGGGCTGGAGGAGGCGCTGCCCCTTGTACGGG
CCAGTCTGCAGCGGCCACGCGGAACGCGGCGCAGCGGCGGGGGAAGTGCC
GCCCGTCTACTTTAG back to top
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