mRNA_H-akashiwo_Contig11.123.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: A0A671KNM3_9TELE (CDGSH iron-sulfur domain-containing protein 1-like n=2 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671KNM3_9TELE) HSP 1 Score: 95.9 bits (237), Expect = 2.020e-22 Identity = 45/65 (69.23%), Postives = 49/65 (75.38%), Query Frame = 2
Query: 140 VNLTIQKDNPKVVDKVSSEDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLIIE 334
VNL +QKDNPKVV ED+ D K V CRCW+SKKFPYCDGAHAKHN ETGDN GPLII+
Sbjct: 44 VNLDLQKDNPKVVHAFDIEDL-----DDKAVYCRCWRSKKFPYCDGAHAKHNQETGDNVGPLIIK 103
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: A0A5A9PBN8_9TELE (CDGSH iron-sulfur domain-containing protein 1 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9PBN8_9TELE) HSP 1 Score: 95.9 bits (237), Expect = 2.020e-22 Identity = 53/109 (48.62%), Postives = 62/109 (56.88%), Query Frame = 2
Query: 8 SPHNIIDKMDALKEIDPKVIMSIAAICVSMAIMMATAFKKPPALVNLTIQKDNPKVVDKVSSEDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLIIE 334
S N + K + + + V + I + I KP VNL +QKDNPKVV EDI K V CRCW+SKKFPYCDGAHAKHN ETGDN GPLII+
Sbjct: 2 SASNTLSKAEIITAVSVSVGAAAVGILIYRTICKKDTCVKPK--VNLDLQKDNPKVVHAFDIEDI-----GDKAVYCRCWRSKKFPYCDGAHAKHNQETGDNVGPLIIK 103
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: A0A383VGD3_TETOB (ZnF_CDGSH domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VGD3_TETOB) HSP 1 Score: 94.7 bits (234), Expect = 2.160e-22 Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 2
Query: 140 VNLTIQKDNPKVVDKVSSEDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLIIE 334
+N I+KD KVVD + +ED+ K K V CRCWKSKKFPYCDGAHAKHNTETGDN GPLI+E
Sbjct: 10 INAEIKKDVDKVVDMLKAEDLPK-----KAVFCRCWKSKKFPYCDGAHAKHNTETGDNVGPLIVE 69
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: A0A8J2KT97_9HEXA (CDGSH iron-sulfur domain-containing protein 2 homolog n=2 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2KT97_9HEXA) HSP 1 Score: 96.3 bits (238), Expect = 2.950e-22 Identity = 44/70 (62.86%), Postives = 53/70 (75.71%), Query Frame = 2
Query: 122 KKPPALVNLTIQKDNPKVVDKVSSEDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLII 331
++P + VNL+++KD+PKVVD V E+I K V CRCW+SKKFPYCDGAH KHN ETGDN GPLII
Sbjct: 65 EEPKSKVNLSVKKDSPKVVDSVDIEEI-----GSKKVFCRCWRSKKFPYCDGAHTKHNEETGDNVGPLII 129
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: A0A5N5PQ28_PANHP (ZnF_CDGSH domain-containing protein n=4 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5PQ28_PANHP) HSP 1 Score: 94.7 bits (234), Expect = 5.710e-22 Identity = 48/77 (62.34%), Postives = 53/77 (68.83%), Query Frame = 2
Query: 113 TAFKKPPAL---VNLTIQKDNPKVVDKVSSEDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLIIE 334
T F K A+ VNL +QKDNPKVV ED+ K V CRCW+SKKFPYCDGAHAKHN ETGDN GPLII+
Sbjct: 32 TLFSKAKAVKPKVNLDLQKDNPKVVHAFDIEDL-----GDKAVYCRCWRSKKFPYCDGAHAKHNQETGDNVGPLIIK 103
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: A0A3B1KGQ7_ASTMX (CDGSH iron-sulfur domain-containing protein 1 n=4 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1KGQ7_ASTMX) HSP 1 Score: 94.4 bits (233), Expect = 8.060e-22 Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 2
Query: 23 IDKMDALKEIDPKVIMSIAAICVSMAIMM-ATAFKKPPAL---VNLTIQKDNPKVVDKVSSEDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLIIE 334
+ + +A+ + D +S+ A ++ +++ T F K + VNL IQKDNPKVV ED+ K V CRCW+SKKFPYCDGAHAKHN ETGDN GPLII+
Sbjct: 1 MSRSNAMSKADLIAAISVTAGAAAVGLLVYKTFFSKGKCVKPKVNLDIQKDNPKVVHAFDIEDL-----GDKAVYCRCWRSKKFPYCDGAHAKHNQETGDNVGPLIIK 103
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: F7DRZ5_MONDO (ZnF_CDGSH domain-containing protein n=2 Tax=Didelphinae TaxID=126287 RepID=F7DRZ5_MONDO) HSP 1 Score: 94.4 bits (233), Expect = 8.290e-22 Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = 2
Query: 122 KKPPALVNLTIQKDNPKVVDKVSSEDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLIIE 334
K+ ++VNL+IQKDNPKVV ED+ + K V CRCW+SKKFP+CDGAH KHN ETGDN GPLII+
Sbjct: 39 KRGKSMVNLSIQKDNPKVVHAFDMEDLGE-----KAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIK 104
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: UPI000C76A43D (CDGSH iron-sulfur domain-containing protein 2 homolog n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76A43D) HSP 1 Score: 95.1 bits (235), Expect = 1.310e-21 Identity = 45/70 (64.29%), Postives = 51/70 (72.86%), Query Frame = 2
Query: 131 PALVNLTIQKDNPKVVDKVSSEDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLIIECS 340
PA VN IQ D PKVVD + EDI + K V+CRCWKSKKFPYCDG HAKHN ETGDN GP+I++ S
Sbjct: 85 PARVNSCIQMDCPKVVDTIDIEDISE-----KAVLCRCWKSKKFPYCDGTHAKHNKETGDNVGPIIVKKS 149
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: A0A835YNQ0_9STRA (CDGSH iron sulfur domain-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.700e-21 Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 2
Query: 59 KVIMSIAAICVSMAIMMATAFKKPPALVNLTIQKDNPKVVDKVSS---EDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLII 331
K+I+++ ++ V++ + + + N +IQ DNPKVVDKV E++ K+G V CRCWKSK FPYCDG+HA HN ETGDN GPLII
Sbjct: 12 KIIVAVLSMAVAILLHLRRSASTSGNRCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLII 105
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Match: A0A8B7G8P8_MICMU (CDGSH iron-sulfur domain-containing protein 1 isoform X2 n=5 Tax=Euarchontoglires TaxID=314146 RepID=A0A8B7G8P8_MICMU) HSP 1 Score: 93.2 bits (230), Expect = 1.920e-21 Identity = 44/67 (65.67%), Postives = 49/67 (73.13%), Query Frame = 2
Query: 134 ALVNLTIQKDNPKVVDKVSSEDIKKAAKDGKLVMCRCWKSKKFPYCDGAHAKHNTETGDNTGPLIIE 334
A+VNL IQKDNPKVV ED+ K V CRCW+SKKFP+CDGAH KHN ETGDN GPLII+
Sbjct: 36 AMVNLHIQKDNPKVVHAFDMEDL-----GDKAVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIK 97 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.123.1 >prot_H-akashiwo_Contig11.123.1 ID=prot_H-akashiwo_Contig11.123.1|Name=mRNA_H-akashiwo_Contig11.123.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=105bp MDALKEIDPKVIMSIAAICVSMAIMMATAFKKPPALVNLTIQKDNPKVVDback to top mRNA from alignment at H-akashiwo_Contig11:5360486..5361745- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig11.123.1 ID=mRNA_H-akashiwo_Contig11.123.1|Name=mRNA_H-akashiwo_Contig11.123.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1260bp|location=Sequence derived from alignment at H-akashiwo_Contig11:5360486..5361745- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig11:5360486..5361745- >mRNA_H-akashiwo_Contig11.123.1 ID=mRNA_H-akashiwo_Contig11.123.1|Name=mRNA_H-akashiwo_Contig11.123.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=315bp|location=Sequence derived from alignment at H-akashiwo_Contig11:5360486..5361745- (Heterosigma akashiwo CCMP452)back to top |