mRNA_H-akashiwo_Contig11.114.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: A0A6S9LPB4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LPB4_HETAK) HSP 1 Score: 169 bits (427), Expect = 2.530e-50 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1
Query: 1 STASVSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP 264
STASVSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP
Sbjct: 83 STASVSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP 170
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: UPI001C122D1D (aquaporin family protein n=2 Tax=Alkaliphilus TaxID=114627 RepID=UPI001C122D1D) HSP 1 Score: 75.9 bits (185), Expect = 1.550e-14 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 4 TASVSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP 264
T +VSG H+NPAV+ ALA +GF W V YI AQ+AG FTGAA+ +A++ FE N I+RGS++S +A F+ +P
Sbjct: 57 TGAVSGTHINPAVTIALAVF------RGFSWKKVIPYIGAQIAGTFTGAAVTFALYHKSFAAFEQANGIIRGSIDSVTTAGIFSTYP 137
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: A0A538F2P2_9ACTN (Aquaporin family protein n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538F2P2_9ACTN) HSP 1 Score: 75.5 bits (184), Expect = 2.910e-14 Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = 1
Query: 13 VSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP 264
VSGAH+NPAV+ ALA ++GF W+ VP YI AQ+AGAFTGAA+ Y + + IK +E VRG S S S FA FP
Sbjct: 88 VSGAHINPAVTVALAV------RRGFPWAKVPHYIFAQVAGAFTGAALVYLNYKDAIKGYEHATGAVRGQSSSIASYSIFATFP 165
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: A0A538FT27_9ACTN (Aquaporin family protein n=5 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538FT27_9ACTN) HSP 1 Score: 75.1 bits (183), Expect = 4.210e-14 Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 1
Query: 13 VSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP 264
+SGAH+NPAV+ ALA ++GF W+ VP YI AQ+AGAFTGAA+ Y + + IK +E VRG S S S FA FP
Sbjct: 88 ISGAHINPAVTIALAF------KRGFPWAKVPHYIFAQVAGAFTGAALVYLNYKDAIKSYEGATHAVRGQTSSIASYSIFATFP 165
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: A0A7S3XV51_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV51_HETAK) HSP 1 Score: 72.0 bits (175), Expect = 1.060e-13 Identity = 42/84 (50.00%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 1 STASVSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAF 252
STASVSGAHLNPAVSFA+A + +S F W + YI AQM G G +N+ F + I +E +N I GS ES SA AF
Sbjct: 28 STASVSGAHLNPAVSFAIALTRGDS----FSWGECGAYILAQMVGGVIGGLVNFLTFYDLIHYYEEQNNIEPGSKESVMSAMAF 107
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: A0A538GD00_9ACTN (Aquaporin family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538GD00_9ACTN) HSP 1 Score: 73.9 bits (180), Expect = 1.130e-13 Identity = 42/84 (50.00%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 13 VSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP 264
+SGAH+NPAV+ ALAA ++GF WS VP YI AQ+AGAFT A+ Y + + IK +E VRG S S S FA FP
Sbjct: 88 ISGAHINPAVTIALAA------KRGFPWSKVPHYIFAQVAGAFTAGALVYLNYKDAIKGYEHATDAVRGQASSIASYSIFATFP 165
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: A0A538KXX8_9ACTN (Aquaporin family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538KXX8_9ACTN) HSP 1 Score: 73.9 bits (180), Expect = 1.160e-13 Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 13 VSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP 264
+SGAH+NPAV+ ALA ++GF W+ VP YI AQ+AGAFT AA+ Y + + IK +E VRG S S S FA FP
Sbjct: 88 ISGAHINPAVTIALAV------KRGFPWAKVPHYIFAQVAGAFTAAALVYLNYKDSIKSYEQATHAVRGQASSIASYSIFATFP 165
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: A0A1Q9RBJ0_PSEPU (Glycerol uptake facilitator protein n=8 Tax=Pseudomonas TaxID=286 RepID=A0A1Q9RBJ0_PSEPU) HSP 1 Score: 73.2 bits (178), Expect = 1.640e-13 Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 4 TASVSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP 264
TA +SGAHLNPAVS AL GF+ +P YI AQ+AGAF GAA+ YA++SN +E +A+VRGS S + AS F+ +P
Sbjct: 62 TAGISGAHLNPAVSIALCLF------AGFEKGKLPFYILAQVAGAFCGAALVYALYSNLFFDYEQTHAMVRGSQASLELASVFSTYP 142
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: UPI001B8CA11D (aquaporin n=1 Tax=Photobacterium sp. GJ3 TaxID=2829502 RepID=UPI001B8CA11D) HSP 1 Score: 72.4 bits (176), Expect = 3.170e-13 Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 4 TASVSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAFACFP 264
TA VSGAH+NPAV+ ALA + GF S V YI AQ+AGAF AA+ Y+++SN FE + IVRGS+ES +A F+ +P
Sbjct: 61 TAGVSGAHINPAVTIALAIFH------GFDKSKVAPYILAQLAGAFCSAALIYSLYSNLFVDFENAHGIVRGSVESLGTAGIFSTYP 141
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Match: A0A7S3XV60_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV60_HETAK) HSP 1 Score: 73.2 bits (178), Expect = 3.290e-13 Identity = 42/83 (50.60%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 4 TASVSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAAINYAVFSNFIKKFEVKNAIVRGSLESAKSASAF 252
TASVSGAHLNPAVSFA+A + K K F W + Y+ AQM G G +NY F + I FE +N I RG +S SA AF
Sbjct: 171 TASVSGAHLNPAVSFAIALTRK----KIFSWGECGAYMLAQMLGGIIGGLVNYLTFYDLINYFEDQNGIDRGDKQSVLSAMAF 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.114.1 >prot_H-akashiwo_Contig11.114.1 ID=prot_H-akashiwo_Contig11.114.1|Name=mRNA_H-akashiwo_Contig11.114.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=89bp STASVSGAHLNPAVSFALAASNKESGQKGFKWSDVPGYISAQMAGAFTGAback to top mRNA from alignment at H-akashiwo_Contig11:4898897..4899622- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig11.114.1 ID=mRNA_H-akashiwo_Contig11.114.1|Name=mRNA_H-akashiwo_Contig11.114.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=726bp|location=Sequence derived from alignment at H-akashiwo_Contig11:4898897..4899622- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig11:4898897..4899622- >mRNA_H-akashiwo_Contig11.114.1 ID=mRNA_H-akashiwo_Contig11.114.1|Name=mRNA_H-akashiwo_Contig11.114.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=267bp|location=Sequence derived from alignment at H-akashiwo_Contig11:4898897..4899622- (Heterosigma akashiwo CCMP452)back to top |