mRNA_H-akashiwo_Contig11.109.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: B8C2A2_THAPS (Hemolysin ii-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2A2_THAPS) HSP 1 Score: 88.6 bits (218), Expect = 1.060e-18 Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = -1
Query: 251 YVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVL 490
Y+T+GW+ FL+I +A +G GL++ +LGG+F+TVGG +YT+E P G FGFHEIWH+ V+L A H+A+M CVL
Sbjct: 136 YITIGWIGAFLMIWIAPAIGLGGLAVFILGGLFFTVGGYVYTTEHPNPY-PGVFGFHEIWHVAVILGAACHFAVMYCCVL 214
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: A0A6U1CTS6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1CTS6_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.690e-18 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = -1
Query: 209 YVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVLPES*K*YFSEAGFG 490
YVT+GW+ FL I + + + + GLSLL LGG+FYTVGGV+++ E P + G FGFHEIWHI V+L A H+ +M L VLP ++S A G
Sbjct: 188 YVTLGWLGAFLSIPLYAKVHSGGLSLLALGGVFYTVGGVVFSVETPNP-VPGKFGFHEIWHIFVILGAALHWCLMFLYVLPW----HYSPASGG 276
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: A0A7S2IBF5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBF5_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.500e-18 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = -1
Query: 203 YVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVLPES*K*YFSEAGFGQN 490
Y+T+GW+ F+ + +G G+ + VLGG+ YTVGG IY++EKP I G FGFHEIWHI V+LAA TH+ +M VLP + + +G N
Sbjct: 210 YITIGWIGAFMAKWLMPVIGAEGMGVFVLGGVLYTVGGAIYSAEKPNP-IPGKFGFHEIWHIFVILAAATHWCLMYFFVLPW----HHPDENYGDN 300
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: A0A7S1WPC6_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WPC6_ALECA) HSP 1 Score: 88.2 bits (217), Expect = 8.430e-18 Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = -1
Query: 236 YVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVLPES*K 490
YVT+GW FL + LG +GLSL+ LGG+ YT GGV++T +KP G FGFHEIWHI VML A H+AM+ V P K
Sbjct: 234 YVTLGWFGAFLAVPAYDCLGPMGLSLMALGGVVYTGGGVVFTMQKPNPF-PGRFGFHEIWHISVMLGAALHWAMVFFYVWPAMCK 317
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: A0A6U3QPW7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QPW7_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.640e-17 Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = -1
Query: 251 YVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVL 490
Y+T+GW+ F+ + +G G+ + LGG+ YTVGG IY++EKP I GHFGFHEIWHI V+LAA TH+ +M VL
Sbjct: 210 YITIGWIGAFMAHWLLPVIGYEGMGIFALGGVLYTVGGAIYSAEKPNP-IPGHFGFHEIWHIFVILAAATHWCLMYFFVL 288
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: A0A1V6BTJ1_9SPIR (Hemolysin-III related n=1 Tax=Spirochaetes bacterium ADurb.Bin133 TaxID=1852909 RepID=A0A1V6BTJ1_9SPIR) HSP 1 Score: 84.3 bits (207), Expect = 5.530e-17 Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = -1
Query: 248 IYVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVLP 493
IYV+MGW+ L + + LG ++LLVLGG+FYTVG +I+ SE+P + G FGFHE+WHI V+L A +H+ +M + +LP
Sbjct: 145 IYVSMGWIGGVLAVPLYKALGFFPIALLVLGGVFYTVGSIIFYSERPN-FVKGKFGFHELWHIFVILGALSHFMIMYIYILP 225
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: A0A7S2KAD1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KAD1_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.170e-16 Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = -1
Query: 248 YVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVLP 490
Y+T+GW+ FL + + Y+G GL + VLGG+ YTVGG +Y+SE+P G FGFHEIWH V+LAA H+A+M V+P
Sbjct: 213 YITIGWLGGFLALYIIPYIGLSGLFVFVLGGVCYTVGGYVYSSEQPNPY-PGKFGFHEIWHCFVILAAFFHFAVMFWWVVP 292
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: A0A261QKZ3_9BACI (Hemolysin n=3 Tax=Bacillaceae TaxID=186817 RepID=A0A261QKZ3_9BACI) HSP 1 Score: 82.0 bits (201), Expect = 3.400e-16 Identity = 40/81 (49.38%), Postives = 56/81 (69.14%), Query Frame = -1
Query: 251 IYVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVL 493
+Y+ MGWM +F + +++ L T GL LLVLGG+FYT+GG+IY + KP L H GFHEI+HI +ML + H+ + L VL
Sbjct: 136 LYIVMGWMIIFAISPLSTNLSTSGLLLLVLGGVFYTIGGIIY-AFKPKCLSFKHMGFHEIFHIFIMLGSTAHFLSVFLYVL 215
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: A0A846TD00_9BACI (Hemolysin III family protein n=3 Tax=Mesobacillus TaxID=2675231 RepID=A0A846TD00_9BACI) HSP 1 Score: 80.9 bits (198), Expect = 9.360e-16 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = -1
Query: 251 IYVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVL 493
IY+ MGWM +F+V ++S L T G+SLLV+GGI YT+GGVIY + KP L H GFHEI+HI +ML + H+ + + VL
Sbjct: 136 IYIIMGWMVIFVVSPLSSVLSTGGISLLVIGGIMYTIGGVIY-ALKPDFLRSKHLGFHEIFHIFIMLGSTAHFLSVYVYVL 215
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Match: UPI00082EE879 (hemolysin III family protein n=1 Tax=Bacillus sp. FJAT-29814 TaxID=1729688 RepID=UPI00082EE879) HSP 1 Score: 79.7 bits (195), Expect = 2.570e-15 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = -1
Query: 251 IYVTMGWMSLFLVISVASYLGTLGLSLLVLGGIFYTVGGVIYTSEKPAALIHGHFGFHEIWHILVMLAAGTHYAMMVLCVL 493
+Y+ MGWM +F+ +A L +GL LLVLGGIFYTVGGVIY KP L H+GFHEI+HI +ML + H+ + L V+
Sbjct: 136 LYIAMGWMVVFVFSPLAGSLNPVGLFLLVLGGIFYTVGGVIY-GAKPKFLKFKHWGFHEIFHIFIMLGSLAHFLCVFLYVI 215 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.109.1 >prot_H-akashiwo_Contig11.109.1 ID=prot_H-akashiwo_Contig11.109.1|Name=mRNA_H-akashiwo_Contig11.109.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=101bp MRMMENDLAVKNFAKERERGKILPKSSFTKISFSRLWKNTEHHHCIVGSCback to top mRNA from alignment at H-akashiwo_Contig11:4657444..4657936+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig11.109.1 ID=mRNA_H-akashiwo_Contig11.109.1|Name=mRNA_H-akashiwo_Contig11.109.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=493bp|location=Sequence derived from alignment at H-akashiwo_Contig11:4657444..4657936+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig11:4657444..4657936+ >mRNA_H-akashiwo_Contig11.109.1 ID=mRNA_H-akashiwo_Contig11.109.1|Name=mRNA_H-akashiwo_Contig11.109.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=303bp|location=Sequence derived from alignment at H-akashiwo_Contig11:4657444..4657936+ (Heterosigma akashiwo CCMP452)back to top |