mRNA_H-akashiwo_Contig1092.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 203 bits (517), Expect = 5.210e-61 Identity = 89/126 (70.63%), Postives = 111/126 (88.10%), Query Frame = 1
Query: 1 WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHQALQHLKMTKNPSGRRARWIMTL 378
W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS GLGA+L Q+T G +P+AYASR+CS TEANYSATELECLGVIYA+QQFRCY++GRE+TL+TDH++L+ LK KNP+GRRARW+MTL
Sbjct: 365 WDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTL 490
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 203 bits (517), Expect = 1.490e-59 Identity = 89/126 (70.63%), Postives = 111/126 (88.10%), Query Frame = 1
Query: 1 WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHQALQHLKMTKNPSGRRARWIMTL 378
W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS GLGA+L Q+T G +P+AYASR+CS TEANYSATELECLGVIYA+QQFRCY++GRE+TL+TDH++L+ LK KNP+GRRARW+MTL
Sbjct: 365 WDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTL 490
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 157 bits (396), Expect = 9.770e-45 Identity = 70/96 (72.92%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 1 WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGRE 288
WTDDCEW++Q LKD L + PILI+P F++ F +ETDAS GLGA+LSQ+T GRKPVAYASRVC+S EANYSATELECLGVI+ +QQFRCYILGR+
Sbjct: 227 WTDDCEWAFQNLKDTLTTAPILIFPNFNKEFTIETDASKHGLGAILSQDTTEGRKPVAYASRVCNSAEANYSATELECLGVIFGIQQFRCYILGRQ 322
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A1B6MF56_9HEMI (RT_RNaseH_2 domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6MF56_9HEMI) HSP 1 Score: 140 bits (354), Expect = 1.040e-40 Identity = 68/126 (53.97%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 1 WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHQALQHLKMTKNPSGRRARWIMTL 378
W C +++TLK+KLVSTP+LI+P F +PFI+ TDAS LGAVLSQE D PVAYASR E NYS TE E LG+++A + FRCY+LGRE+ +TDH AL+ + K+PS R RW + L
Sbjct: 5 WDQACHAAFETLKEKLVSTPVLIFPDFSKPFILATDASLDALGAVLSQEIDGEEHPVAYASRTLFPAEKNYSTTERELLGLVWATKYFRCYLLGREFRAVTDHAALKWMLSLKDPSSRLTRWSLRL 130
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A1B6LP54_9HEMI (RNA-directed DNA polymerase n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6LP54_9HEMI) HSP 1 Score: 141 bits (355), Expect = 2.040e-36 Identity = 65/126 (51.59%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 1 WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHQALQHLKMTKNPSGRRARWIMTL 378
WTD+CE ++++LK+KL+S PIL+YP F +PF++ TDAS GLGA+L+ D P+ YASR +S+E NYSATELE L VI+AV+ FRCY+ G +TL+TDH A++ L K+ + R RW + L
Sbjct: 511 WTDECEQAFKSLKEKLMSEPILVYPDFSKPFLLSTDASSVGLGAILANVIDGQEHPICYASRQLNSSERNYSATELEMLAVIWAVKYFRCYLTGVHFTLVTDHSAIRWLLSLKDSTSRLTRWALKL 636
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A224XDN8_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XDN8_9HEMI) HSP 1 Score: 139 bits (350), Expect = 9.610e-36 Identity = 65/126 (51.59%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 1 WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHQALQHLKMTKNPSGRRARWIMTL 378
WTD+ + +++ LK+ LV+ P+L P F+ PF+++TDAS GLGA+LSQ + G KP+A+ASR + E N+S TELECL V++AV++FR Y+ G E+T+ITDH+AL LK K+P GR ARW M +
Sbjct: 493 WTDNQDKAFKELKEVLVTAPVLTCPDFNHPFLLQTDASQSGLGAILSQNLEEGEKPIAFASRSLTRNEKNFSTTELECLAVLWAVEKFRPYLEGIEFTVITDHRALLWLKSLKDPQGRLARWAMKI 618
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A1B6K8D1_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6K8D1_9HEMI) HSP 1 Score: 138 bits (348), Expect = 1.730e-35 Identity = 65/126 (51.59%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 1 WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHQALQHLKMTKNPSGRRARWIMTL 378
WT +CE +++TLK+KLV+ P+L YP F + FIV TDAS + + A+LSQ D +P+AY SRVC+ E+ YSATELE L +I A++ +RCY+ GR + +ITDH AL++L K+PS R ARW + L
Sbjct: 351 WTAECEQAFETLKEKLVTYPVLAYPDFSKEFIVATDASSKSIAAILSQVQDGVERPIAYWSRVCNPAESRYSATELEMLALISAIKHWRCYLYGRHFHVITDHAALKYLLSLKDPSSRLARWGLKL 476
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A1B6JD37_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6JD37_9HEMI) HSP 1 Score: 132 bits (332), Expect = 1.910e-35 Identity = 63/126 (50.00%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 1 WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHQALQHLKMTKNPSGRRARWIMTL 378
WT + E ++Q +K L+S PIL P F +PF + DASG G+GAVLSQ+++ G VAYASR + E N+SATE ECL VI+AV++FR Y+ G +T++TDH +L L K+P+GR ARW + L
Sbjct: 24 WTPEAEMAFQDVKSCLISAPILSCPDFSKPFTISCDASGVGIGAVLSQDSEQGESVVAYASRTLTRQEQNFSATERECLAVIFAVEKFRPYVEGTRFTVVTDHYSLLWLSNLKDPTGRLARWALRL 149
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A6A3QF82_9STRA (RT_RNaseH domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QF82_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.020e-35 Identity = 63/129 (48.84%), Postives = 88/129 (68.22%), Query Frame = 1
Query: 16 EWSWQTLKDK--------LVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHQALQHLKMTKNPSGRRARWIMTL 378
EW+W +++ L + P+L+YP +D PF + T+AS GLGAVLSQ+ G +PVAYAS+V S ANYS +ELECL V++AV+ FR ++ GR +T++TDH AL+ L TK P+GR RW +TL
Sbjct: 13 EWAWGAAQEEAFTWAKAWLSTKPVLVYPNYDLPFNLTTEASKAGLGAVLSQDQGRGDQPVAYASKVNSPAVANYSISELECLAVVWAVRLFRSHLYGRRFTIVTDHVALKWLMTTKEPAGRLPRWALTL 141
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Match: A0A8J6LJE6_TENMO (RT_RNaseH_2 domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LJE6_TENMO) HSP 1 Score: 130 bits (327), Expect = 2.190e-35 Identity = 59/126 (46.83%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 1 WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETDHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHQALQHLKMTKNPSGRRARWIMTL 378
WT + + ++Q +KD LVS P+L P F +PF+++TDAS GLGAVL+Q+ D + +AYASR + E NYS TE ECL V++A+++FR Y+ G +T++TDH +L L K+P+G+ ARW + L
Sbjct: 19 WTPEAQEAFQKIKDALVSAPVLSSPDFSKPFVIQTDASDTGLGAVLTQDLDGDERVIAYASRSLTKAERNYSVTERECLAVLFALEKFRPYVEGTHFTIVTDHYSLLWLNRMKDPAGKLARWSVKL 144 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1092.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1092.3.1 >prot_H-akashiwo_Contig1092.3.1 ID=prot_H-akashiwo_Contig1092.3.1|Name=mRNA_H-akashiwo_Contig1092.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=126bp WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLSQETback to top mRNA from alignment at H-akashiwo_Contig1092:213977..214354- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1092.3.1 ID=mRNA_H-akashiwo_Contig1092.3.1|Name=mRNA_H-akashiwo_Contig1092.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=378bp|location=Sequence derived from alignment at H-akashiwo_Contig1092:213977..214354- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1092:213977..214354- >mRNA_H-akashiwo_Contig1092.3.1 ID=mRNA_H-akashiwo_Contig1092.3.1|Name=mRNA_H-akashiwo_Contig1092.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=378bp|location=Sequence derived from alignment at H-akashiwo_Contig1092:213977..214354- (Heterosigma akashiwo CCMP452)back to top |