mRNA_H-akashiwo_Contig1091.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: A0A7S3Y526_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y526_HETAK) HSP 1 Score: 244 bits (622), Expect = 5.740e-73 Identity = 130/232 (56.03%), Postives = 167/232 (71.98%), Query Frame = 1
Query: 1 RIPKVVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPEQVWEALLLNQNTSEDAILARYDMVIHLHSVAVEFPELYDDLMMNNSSRQETLEEARIQDEKKLASWSAHPCHYEIKNDHAALFSKVAKAQTAIVDTLTIRGRPRPR-QPPGLQ 693
+I KVVL+GGP GKT+AI+++ LL ++P L PKVLAIPE T++ EMG+ R +EL + +LLAFQ+A+F++Q++LE+T MKLARKLA C+E+R+RDII+LMDRGLMDCKGYVP +WEA+LL +NTSE+AILARYD VIHL SVAVE P+LYD+L ++N R E E+A QD + SW HP H I N KV K Q A+ L RGR RP PPG +
Sbjct: 185 KIVKVVLSGGPNGGKTTAIQVVPALLKSDPQLNLPKVLAIPEVPTLIMEMGVHRAEEL-MTNSEKLLAFQEAVFDVQLALEDTTMKLARKLASCSENRARDIIVLMDRGLMDCKGYVPPHIWEAILLKKNTSEEAILARYDAVIHLRSVAVEDPDLYDELAVSNRVRIENKEQAATQDTTEWNSWIRHPAHMVINNGDDNWAEKVLKVQEAVKQALWTRGRTRPPGAPPGFE 415
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: A0A7S3Y5E0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E0_HETAK) HSP 1 Score: 144 bits (364), Expect = 1.950e-38 Identity = 72/119 (60.50%), Postives = 98/119 (82.35%), Query Frame = 1
Query: 1 RIPKVVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPE 357
+I KVVL+GGP GKT+AI+++ LL ++P L PKVLAIPE T++ EMG+ R +EL + +LLAFQ+A+F++Q++LE+T MKLARKLA C+E+R+RDII+LMDRGLMDCKGYVP+
Sbjct: 185 KIVKVVLSGGPNGGKTTAIQVVPALLKSDPQLNLPKVLAIPEVPTLIMEMGVHRAEEL-MTNSEKLLAFQEAVFDVQLALEDTTMKLARKLASCSENRARDIIVLMDRGLMDCKGYVPQ 302
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: A0A1V4W7F4_9DELT (AAA_28 domain-containing protein n=3 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A1V4W7F4_9DELT) HSP 1 Score: 115 bits (289), Expect = 6.260e-27 Identity = 80/222 (36.04%), Postives = 126/222 (56.76%), Query Frame = 1
Query: 13 VVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPEQVWEALLLNQNTSEDAILARYDMVIHLHSVAVEFPELYDDLMMNNSSRQETLEEARIQDEKKLASWSAHPCHYEIKNDHAALFSKVAKAQTAIVDTLTIRGRPRPRQ 678
+VLTGGP +GK+S++ LT L+ + V IPETAT++ GI R+ K++Q++ +++A+ ++Q++ E T + ++ R IIL+DRG+MD K ++P+ + A+L + +E + RY+ VIHL + A P Y NNS+R ET EEARI D+K SW HP H++I ++ K+A+A +AI L G P P Q
Sbjct: 2 IVLTGGPCSGKSSSLAYLTERLSDNGFM----VFVIPETATLITNSGIDRRK---MNKSKQVVMYEEAILDMQLAFEETYQQTVTRIFP-----ERKKIILLDRGIMDIKAFMPDDDFRAILKKKRLTEVRLRDRYNGVIHLVTAAEGAPAFYTG--ENNSARIETPEEARIIDQKIRESWLGHP-HFKIIDNSTDFEGKIARAFSAISHFL---GLPAPLQ 205
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: A0A7S2XZZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZZ9_9STRA) HSP 1 Score: 113 bits (282), Expect = 8.130e-27 Identity = 73/218 (33.49%), Postives = 114/218 (52.29%), Query Frame = 1
Query: 10 KVVLTGGPVAGKTSAIKLLTLLLATEPTLQNP--KVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPEQVWEALLLNQNTSEDAILARYDMVIHLHSVAVEFPELYDDLMMNNSSRQETLEEARIQDEKKLASWSAHPCHYEIKNDHAALFSKVAKAQTAIVDTLTIR 657
K+VLTGGP GKTS++ ++ ++N KV+ +PET+T+L G+ +D ++L +Q+ LE+T ++ C R++++L DRG MDCKGY P + W+ + SE A+L RYD+V+HL S A+ Y + NN R ET+E+AR QD ++ SW HP + N + +K + AI L +R
Sbjct: 50 KIVLTGGPCGGKTSSLDVV------RQEIENLGYKVMVVPETSTLLQTGGLQFRDACRTTLCAKMLT-------LQVELEDTFERV------CVASGMRNVVLLCDRGTMDCKGYNPPEAWDQAVEQSGYSEQALLERYDLVVHLVSTAIGAERHYTN--SNNKIRVETMEQAREQDFRERQSWVKHPNRVIVHNG-CSFEAKCQRINAAIKSQLVVR 245
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: A0A0L0DT53_THETB (AAA_28 domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DT53_THETB) HSP 1 Score: 107 bits (268), Expect = 8.990e-24 Identity = 68/193 (35.23%), Postives = 105/193 (54.40%), Query Frame = 1
Query: 13 VVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPEQVWEALLLNQNTSEDAILARYDMVIHLHSVAVEFPELYDDLMMNN-SSRQETLEEARIQDEKKLASWSAHPCHYEIKN 588
+VLTGGP+ GK+S ++++T LA L+ +V PE T+L G G L AF+ AL +Q LEN+ K+A + +I+ DRGLMD + +VP+ +W+++L SED + RYD+V+HL S A E+Y+++ + +SR T+ AR D + +A W AHP H + N
Sbjct: 112 IVLTGGPMGGKSSCLEVITKALA----LRGYEVYVAPEIPTLLLNGGCRYPKTEGGP---MLEAFETALLHLQWQLENSFFKIALAAR-------KPSVIIYDRGLMDVRAFVPDTMWQSMLTANGWSEDVFMGRYDLVMHLMSAASGLQEVYEEVCSSQPNSRIATIPAARDLDARLVACWQAHPKHIVVPN 290
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: A0A1V5CI78_9DELT (AAA_28 domain-containing protein n=1 Tax=Syntrophorhabdaceae bacterium PtaU1.Bin034 TaxID=1811715 RepID=A0A1V5CI78_9DELT) HSP 1 Score: 103 bits (257), Expect = 2.900e-22 Identity = 70/215 (32.56%), Postives = 118/215 (54.88%), Query Frame = 1
Query: 4 IPKVVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPEQVWEALLLNQNTSEDAILARYDMVIHLHSVAVEFPELYDDLMMNNSSRQETLEEARIQDEKKLASWSAHPCHYEIKNDHAALFSKVAKAQTAIVDTL 648
+ +VLTGGP +GK+S++ LT L+ + V IPETAT++ + GI R+ + Q+ +++A+ ++Q+S E T AR ++ +R + +IL+DRG+MD K +VPE+ ++++L + E + RY+ VIHL + A + Y NN +R ET EEA D K SW HP H+++ ++ K+ + I+ L
Sbjct: 11 VSMIVLTGGPCSGKSSSLAYLTERLSDHGFM----VFVIPETATLITDNGIDRRK---MDRASQVALYEEAILDMQLSFEET---YARTVSRIFPERKK--VILLDRGVMDIKAFVPEKTFKSMLARKGLKEIELRDRYNGVIHLVTAAEGAEDFYTG--ENNGARIETAEEAIRIDVKIRESWLGHP-HFKVIDNRTDFDGKIRRTYATIMQFL 210
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: A0A7S2ST68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST68_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.050e-21 Identity = 70/224 (31.25%), Postives = 111/224 (49.55%), Query Frame = 1
Query: 1 RIPKVVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPEQVWEALL------LNQNTSEDAILARYDMVIHLHSVAVEFPELYD-----DLMMNNSSRQETLEEARIQDEKKLASWSAHPCHYEIKNDHAALFSKVAKAQTAIV 639
R+ ++ LTGGP AGK+SA+ +T E T + V + PET T+L+ G + ++ FQ++L ++Q+ +E + +AR R II+ DRGL+D +GY+ ++W+ +L ++ E +LARY+ VIHL + A E Y D SR E+ EEAR D K W HP H I N +K+ A++ ++
Sbjct: 65 RVIRIALTGGPCAGKSSALGQITQ----EATARGFDVYSAPETPTLLFHTGAKLP---AKSDGEEMFHFQRSLMQLQLQIEASLTSIARSTG-------RPTIIIFDRGLLDPRGYMAPEIWDRVLGSLSDGSGRSVDETRLLARYEGVIHLVTAADGAEEFYKWGKVADDSGKEVSRTESPEEARALDVKMQECWRGHPNHMVIHNTVGGFKAKLKDAESFVL 274
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: A0A1V4WZI2_9DELT (AAA_28 domain-containing protein n=2 Tax=unclassified Syntrophorhabdus TaxID=2628565 RepID=A0A1V4WZI2_9DELT) HSP 1 Score: 100 bits (249), Expect = 3.960e-21 Identity = 72/217 (33.18%), Postives = 121/217 (55.76%), Query Frame = 1
Query: 4 IPKVVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPEQVWEALLLNQNTSEDAILARYDMVIHLHSVAVEFPELYDDLMMNNSSRQETLEEARIQDEKKLASWSAHPCHYEIKNDHAALFSKVAKAQTAIVDTLTI 654
+ +VLTGGP +GK+S++ LT L+ + V +PETAT++ GI R+ K Q++ F++A+F++Q+S E+T R ++ +R + +IL+DRG+MD + ++ + V+ ++L + + AI RYD VIHL + A + Y NN++R ET EEA D + SW HP ++I ++ K+ +A +AI L I
Sbjct: 11 VSMIVLTGGPCSGKSSSLAYLTEKLSDHGFM----VFVVPETATLITGNGIDRRK---MDKPGQIVVFEEAIFDMQMSFEDT---YKRAVSRIFPERRK--VILLDRGIMDIRAFLTDDVFNSILKKKGLTRAAIRHRYDGVIHLVTAADGAADYYTG--ENNTARLETPEEALRIDLRTKESWLGHP-RFKIIDNSTDFEGKIKRAFSAIARFLGI 212
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: A0A069ZKQ3_9PORP (AAA_28 domain-containing protein n=9 Tax=Porphyromonadaceae TaxID=171551 RepID=A0A069ZKQ3_9PORP) HSP 1 Score: 99.4 bits (246), Expect = 7.930e-21 Identity = 72/216 (33.33%), Postives = 110/216 (50.93%), Query Frame = 1
Query: 4 IPKVVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPEQVWEALLLNQNTSEDAIL-ARYDMVIHLHSVAVEFPELYDDLMMNNSSRQETLEEARIQDEKKLASWSAHPCHYEIKNDHAALFSKVAKAQTAIVDTL 648
I ++ LTGGP AGKT+A+ + + L V A+PET T+ I+ G + ++A+ + Q+ +E+T ++LA H ++I+ DRG MD Y+ +W+ALL SE + ARYD VIH+ + A E Y + NN+SR ET+EEAR D + L +W+ HP H I ++ K+ AI +TL
Sbjct: 5 ITRIALTGGPCAGKTTALAQIIEHFSDLGYL----VYALPETPTLFSNASIN----FGTPDRQYFYNIEKAVMKYQLQMEDTFLELAHTAPH-------PVLIISDRGTMDISNYIERTMWQALLDELGLSEIKLRDARYDAVIHMVTAAQGAEEFYT--LENNASRHETVEEARDLDARILKAWTGHP-HLHIVENNVDFQEKIRHVLQAIHETL 202
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Match: R5F9F7_9BACT (AAA_28 domain-containing protein n=1 Tax=Prevotella sp. CAG:924 TaxID=1262938 RepID=R5F9F7_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 1.180e-20 Identity = 71/217 (32.72%), Postives = 113/217 (52.07%), Query Frame = 1
Query: 4 IPKVVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMGISRKDELGRGKTRQLLAFQQALFEIQISLENTAMKLARKLAHCAEDRSRDIIILMDRGLMDCKGYVPEQVWEALLLNQNTSEDAILARYDMVIHLHSVAVEFPELYDDLMMNNSSRQETLEEARIQDEKKLASWSAHPCHYEIKNDHAALFSKVAKAQTAIVDTLTI 654
I K+VLTGGP AGKT+A+ + + + + KV +PE T+ + G+ D L + K + A ++Q+ LE+ M++A+ L A +I+ DRG MD Y+ + WE ++ +Q +E + ARYD V+HL S A E Y NN R E LE AR D+K + +W+ HP H + N+H +K+ + I + L++
Sbjct: 4 IKKIVLTGGPCAGKTTAL----VKVMEHFSSRGFKVFTLPEVPTLFSQAGM---DYLTKNK-EFFYKGEVATLKMQLMLEDEFMRMAQTLHEPA-------VIICDRGTMDISAYLQPEDWEKIITSQGYTEQQLRARYDAVLHLVSAADGAEEYYT--TTNNKERTEGLELARELDKKIIHAWTGHP-HLRVINNHRNFDNKINRVLKEISNVLSL 202 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1091.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1091.1.1 >prot_H-akashiwo_Contig1091.1.1 ID=prot_H-akashiwo_Contig1091.1.1|Name=mRNA_H-akashiwo_Contig1091.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=239bp RIPKVVLTGGPVAGKTSAIKLLTLLLATEPTLQNPKVLAIPETATMLYEMback to top mRNA from alignment at H-akashiwo_Contig1091:55783..56499+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1091.1.1 ID=mRNA_H-akashiwo_Contig1091.1.1|Name=mRNA_H-akashiwo_Contig1091.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=717bp|location=Sequence derived from alignment at H-akashiwo_Contig1091:55783..56499+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1091:55783..56499+ >mRNA_H-akashiwo_Contig1091.1.1 ID=mRNA_H-akashiwo_Contig1091.1.1|Name=mRNA_H-akashiwo_Contig1091.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=717bp|location=Sequence derived from alignment at H-akashiwo_Contig1091:55783..56499+ (Heterosigma akashiwo CCMP452)back to top |