mRNA_H-akashiwo_Contig1090.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: W7THZ5_9STRA (Solute carrier family member 36 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THZ5_9STRA) HSP 1 Score: 264 bits (675), Expect = 7.350e-83 Identity = 134/246 (54.47%), Postives = 177/246 (71.95%), Query Frame = 3
Query: 165 FLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPFLGNTPLTHLFSAVAAGLSSNTITNPIWVVKTRLQLQADGSKGQLAFKGWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIKKRLKEQNARVHEAETGEALDPDSIPLQTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFLEGCREAER 902
F +GL LVGI+P RA YFW+YS+SK L+P LG+ LTH+ S +AAG++ NTITNPIW+VKTR+QL ADG+ GQ+A+ +R+A I R EGL+GF++GLSASYWG +E CIQF YE +KK+L +N AE EA + D P T + AA +K VA +TYP+ V RTR+REQA G FKY+ MW +L ++A+EEG GLY GMG H+AR +P+TA+MFLS+EL++ FL G R AE+
Sbjct: 142 FFRGLPPTLVGIIPARATYFWAYSTSKQALMPSLGDNTLTHILSGIAAGVTGNTITNPIWMVKTRMQLMADGAVGQMAYTSYRNAITRIYREEGLKGFWKGLSASYWGCSEGCIQFVVYEKLKKQLLVRNNDKRRAEGLEAKE-DLPPTFT---LAAAAFSKFVATTATYPHEVVRTRLREQARNGAFKYRSMWQSLRLIAKEEGRRGLYAGMGTHVARVVPNTAIMFLSFELVNSFL-GKRFAEK 382
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: A0A836CGB6_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB6_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.220e-80 Identity = 126/239 (52.72%), Postives = 170/239 (71.13%), Query Frame = 3
Query: 165 FLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPFLGNTPLTHLFSAVAAGLSSNTITNPIWVVKTRLQLQADGSKGQLAFKGWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIKKRLKEQNARVHEAETGEALDPDSIPLQTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFLE 881
F +GL+ L+GI P+RA YFW+Y S+K VL P LG+ LTH+ + AAG+ SNTITNPIW+VKTR+QL A+ +KGQ+A+ G+R A I + EG+ GFY+GLSASYWG +E CIQF YE +K+ L+ ++A A D L QY L AAA K +A ++TYP+ V RTR+REQA GVF+Y GMW ++ ++ +EEG GLY GMG H+AR +P+TA+MFLSYELI+ +L+
Sbjct: 84 FFRGLSPTLLGIFPSRATYFWAYESTKRVLTPRLGDGTLTHIGAGFAAGMVSNTITNPIWMVKTRMQLLANAAKGQVAYTGYRHAVKSILKEEGVRGFYKGLSASYWGCSEGCIQFVAYEKLKRHLEARHAEHCRANGLPVTDR----LPPYQYFLGAAACKFLATVTTYPHEVVRTRLREQAKNGVFRYTGMWQSIMLIGKEEGRKGLYAGMGTHVARVVPNTAIMFLSYELINTWLD 318
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: A0A835YUQ3_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUQ3_9STRA) HSP 1 Score: 249 bits (635), Expect = 2.300e-78 Identity = 123/241 (51.04%), Postives = 171/241 (70.95%), Query Frame = 3
Query: 165 FLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPFLGNTPLTHLFSAVAAGLSSNTITNPIWVVKTRLQLQA--DGSKGQLAFKGWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIKKRLKEQNARVHEAETGEALDPDSIPLQTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFLE 881
F +GL+ L+GI P+RA YFW+Y + K LVP LG+ +TH+ + ++AG ++NTIT+PIW+VKTR+QL A D + GQ+A++G+R A I R EG GFY+GL+ASYWG +E CIQF YE +K+ L+ ++A H G P + L QY L AAA+KL+A ++TYP+ V RTR+REQA GVFKY GMW +L ++ REEG+ GLY GM H+AR +P+ A++FLSYELI+ + E
Sbjct: 44 FFRGLSPTLLGIFPSRASYFWAYETMKSGLVPVLGDGTVTHIVAGLSAGATANTITSPIWMVKTRMQLLASIDAAHGQVAYRGYRHAIQTIYRQEGFRGFYKGLTASYWGCSEGCIQFVAYEKLKRHLEARHAE-HCRRNGL---PVTDRLPPHQYFLSAAASKLMATITTYPHEVVRTRLREQARNGVFKYTGMWQSLNLIGREEGVRGLYAGMATHVARVVPNAAILFLSYELINRWFE 280
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: A0A6V2SS18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2SS18_HETAK) HSP 1 Score: 248 bits (633), Expect = 9.790e-77 Identity = 131/241 (54.36%), Postives = 171/241 (70.95%), Query Frame = 3
Query: 165 FLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPFLGNTPLTHLFSAVAAGLSSNTITNPIWVVKTRLQLQA-DGSKGQLAFK-GWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIKKRLKEQNARVHEAETGEALDPDSIPLQTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFLE 881
F +GL LVGI+P+RA YFW+Y ++K L P LG++ TH +A+AAG++ NTITNPIWV+KTR+QL A + SK A++ G+R A + + EG GFY+GLSASYWG +E CIQF YE +K L+ + R EA A P + L QY+L A AAKLVA+ TYP+ VARTRMRE A GV KY+GMW +LG++A+EEG AGLY GMG HLAR +P+TA+MFLS+ELI + L+
Sbjct: 126 FFRGLPPTLVGIIPSRASYFWAYGAAKRGLAPRLGDSTPTHFLAAIAAGVTGNTITNPIWVLKTRMQLLAGEASKQTGAYQSGYRTAIQAVLKEEGWRGFYKGLSASYWGCSEGCIQFVAYERLKGALRTAHNREREA----AGLPPTETLPPLQYVLGAGAAKLVASALTYPHEVARTRMREAAVDGVTKYKGMWQSLGLIAKEEGRAGLYAGMGTHLARVVPNTAIMFLSFELISKALD 362
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: K0TQ52_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQ52_THAOC) HSP 1 Score: 238 bits (608), Expect = 6.500e-74 Identity = 128/257 (49.81%), Postives = 170/257 (66.15%), Query Frame = 3
Query: 132 EANHEREWC*RFLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPFLGNTPLTH------LFSAVAAGLSSNTITNPIWVVKTRLQLQADGSKGQLAFKGWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIKKRLKEQNARVHEAETGEALDP-DSIPLQTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFLE 881
+A E++ F KGL L+GI+P R++YF+SY SK FLGN L L S AG+SSNT+TNPIW+VK+RLQL AD + Q + G+RDA I ++EG+ GFY+G+SASYWG E QF YE +K RL ++ R EA+ L P + +P T Y L AA AK A++ TYP+ VARTRMREQA GVFKY+GMW T+G+VA EEG GLY GMG+HL + +P++A+MFL+YE++ +LE
Sbjct: 64 KAIFEKDGIFGFWKGLRPTLIGIIPARSIYFFSYEQSKR----FLGNAGLKEGQVSNALLSGFFAGISSNTLTNPIWMVKSRLQLLADSTANQKVYAGYRDAVKSIFQDEGIRGFYKGISASYWGCLEGAAQFVMYEQLKSRLTDKQNRQREAQ---GLGPTNKLPKLT--YFLSAALAKGTASILTYPHEVARTRMREQARNGVFKYKGMWQTIGLVASEEGRKGLYGGMGVHLLKVVPNSAIMFLTYEIVSSYLE 311
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: B8BVH0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVH0_THAPS) HSP 1 Score: 232 bits (591), Expect = 1.590e-71 Identity = 124/242 (51.24%), Postives = 164/242 (67.77%), Query Frame = 3
Query: 165 FLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPFLGNTPLTH-LFSAVAAGLSSNTITNPIWVVKTRLQLQADGSKGQLAFKGWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIK-KRLKEQNARVHEAETGEALDP-DSIPLQTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFLE 881
F +GL LVGI+P R+VYF+SY +K L P L + + L S ++AG++ NT+TNPIWVVKTR+QL AD S GQ + G+RDA I EG+ GFY+G++ASYWG E QF YE IK K L +QN + E E L P D +P Y AA AK A++ TYP+ VARTR+REQA GVFKY+GMW T+GV+A+EEG GLY GMG+HL + +P++A+MFL+YE+ + +LE
Sbjct: 63 FFRGLRPTLVGIIPARSVYFYSYEQTKRFLGPMLPEGSVGNALISGLSAGIAGNTLTNPIWVVKTRMQLLADSSAGQKVYTGYRDACRTIFAEEGIGGFYKGITASYWGCLEGAAQFMIYEQIKAKMLFKQNLQREE----EGLLPTDKLPKFV--YFFSAAIAKGTASIITYPHEVARTRLREQARNGVFKYKGMWQTIGVIAKEEGTKGLYSGMGVHLMKVVPNSAIMFLAYEMANTWLE 298
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: A0A7S2RK71_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RK71_9STRA) HSP 1 Score: 230 bits (587), Expect = 8.480e-70 Identity = 122/245 (49.80%), Postives = 164/245 (66.94%), Query Frame = 3
Query: 165 FLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPF------LGNTPLTHLFSAVAAGLSSNTITNPIWVVKTRLQLQADGSKGQLAFKGWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIKKRL-KEQNARVHEAETGEALDPDSIPLQTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFL 878
F +G+ LVGI+P R++YF+SY +K L +GN L S AAG++SNT+TNPIW+VKTR+QL AD S GQ A+ + D I + EG+ GFY+G+SASYWG AE CIQF YE IK RL K+QN + E + L P + L Y L AA K +A+++TYP+ V RTR+REQA GVFKY MW LG++A+EEG GLY GMG+HLA+ +P++A+MFL+YEL++ +L
Sbjct: 151 FWRGMKPTLVGIIPARSIYFYSYVQTKSALGKLNLPEGSVGNA----LISGFAAGIASNTLTNPIWMVKTRMQLLADNSVGQKAYANYGDVIQTIWKEEGVGGFYKGISASYWGCAEGCIQFILYEQIKTRLVKKQNEKREE----QGLPPTN-DLPKLSYFLSAAVCKGMASIATYPHEVVRTRLREQARGGVFKYHSMWQALGLIAKEEGRQGLYAGMGVHLAKVVPNSAIMFLTYELVNSWL 386
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: A0A8J9T6G8_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T6G8_PHATR) HSP 1 Score: 227 bits (578), Expect = 1.200e-69 Identity = 115/239 (48.12%), Postives = 163/239 (68.20%), Query Frame = 3
Query: 165 FLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPFLGN-TPLTHLFSAVAAGLSSNTITNPIWVVKTRLQLQADGSKGQLAFKGWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIKKRLKEQNARVHEAETGEALDPDSIPLQTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFL 878
F +GL LVGI+P+R+ YF+SY K L P+L +P + + AG++SNT+TNPIW+V+TR+QL AD + GQ A+ G+ DA I R +GL+GFY+G+ ASYWG AE +QF YE K RL R++ A+ E P + L Y AAAAK+ A+++TYP+ VARTRMREQA G++KY+ MW +L V+++EEGM GLY GMG+HL + +P++A MFL+YE++ +L
Sbjct: 58 FFRGLPPTLVGIIPSRSAYFYSYQQIKKRLGPYLPEGSPPNAMLAGFMAGITSNTLTNPIWMVRTRMQLLADTTAGQRAYNGYGDAISTIWREDGLKGFYKGIQASYWGCAEGAVQFILYEQFKTRLL---GRLN-AQRAECGLPATEELPKMTYFWSAAAAKMCASIATYPHEVARTRMREQARGGIYKYKSMWQSLAVISQEEGMKGLYSGMGVHLLKVVPNSAFMFLTYEVVRSWL 292
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: A0A0G4ERH1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERH1_VITBC) HSP 1 Score: 230 bits (587), Expect = 1.310e-69 Identity = 122/246 (49.59%), Postives = 160/246 (65.04%), Query Frame = 3
Query: 165 FLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPFLGNTPLTHLFSAVAAGLSSNTITNPIWVVKTRLQLQADGSKGQLAFKGWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIKKRLKEQNARVHEAETGEALDPDSIPL-QTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFLEGCREAE 899
F +GL LVGI+P R++YFW YS+ K L P++ N+PLTH+ SA AG SNT+TNPIW+V+TRLQL A GQ A+KG+ DA I NEG GF +G++ASYWG++E CI + YE +KK + N+ +H T L PL + Q L AA +KL+A TYP+ V RTR+REQA GV+KY GM L ++AREEG GLY G HL R +P+ A++FLSYELI+ +L E E
Sbjct: 139 FYRGLAPTLVGIIPARSIYFWGYSTMKSFLFPYMDNSPLTHILSAAVAGGISNTVTNPIWMVRTRLQLLAQ--PGQSAYKGYTDAVRQIWANEGFGGFMKGVTASYWGISEGCINWVVYERLKKVV---NSHMHTNGTSTLL-----PLPKNAQLFLSAACSKLLATSCTYPHEVVRTRLREQAVGGVYKYTGMLQALRLIAREEGRRGLYAGFRTHLLRVVPNNAILFLSYELINAWLHTQMERE 374
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Match: A0A1Z5JUA7_FISSO (Solute carrier family 25, member 33/36 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUA7_FISSO) HSP 1 Score: 228 bits (582), Expect = 3.700e-69 Identity = 115/241 (47.72%), Postives = 159/241 (65.98%), Query Frame = 3
Query: 165 FLKGLNAFLVGIVPNRAVYFWSYSSSKDVLVPFLGN-TPLTHLFSAVAAGLSSNTITNPIWVVKTRLQLQADGSKGQLAFKGWRDAADWIARNEGLEGFYRGLSASYWGVAEACIQFTTYEFIKKRL--KEQNARVHEAETGEALDPDSIPLQTGQYMLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEGMAGLYRGMGIHLARALPHTALMFLSYELIDEFL 878
F +GL LVGI+P+R+ YF++Y SK L P+ +P L + AG+ NT+TNPIW+V+TR+Q+ AD + GQ ++ G+ DA I + EG+ GFYRG+ ASYWG E +QF YE +K RL + N R+ L PDS L AA AK++A++ TYP+ VARTRMREQA G+FKY+GMW T+ V+A+EEG GLY GMGIHL + +P++ALMFL+YE++ +L
Sbjct: 127 FFRGLPPTLVGIIPSRSAYFYAYQQSKHALGPYFPEGSPPNALLAGFFAGIVGNTLTNPIWMVRTRMQIFADAAAGQRSYNGYGDAIKTIFKEEGIGGFYRGIQASYWGCLEGSVQFIVYEQLKTRLLKRHNNNRI-----AHGLSPDS-ELNKFTIFWTAALAKMIASVGTYPHEVARTRMREQARSGIFKYKGMWQTMAVIAKEEGRQGLYSGMGIHLVKVVPNSALMFLTYEVVRTWL 361 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1090.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1090.5.1 >prot_H-akashiwo_Contig1090.5.1 ID=prot_H-akashiwo_Contig1090.5.1|Name=mRNA_H-akashiwo_Contig1090.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=92bp MLVAAAAKLVANLSTYPYMVARTRMREQATRGVFKYQGMWNTLGVVAREEback to top mRNA from alignment at H-akashiwo_Contig1090:123209..124110- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1090.5.1 ID=mRNA_H-akashiwo_Contig1090.5.1|Name=mRNA_H-akashiwo_Contig1090.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=902bp|location=Sequence derived from alignment at H-akashiwo_Contig1090:123209..124110- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1090:123209..124110- >mRNA_H-akashiwo_Contig1090.5.1 ID=mRNA_H-akashiwo_Contig1090.5.1|Name=mRNA_H-akashiwo_Contig1090.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=276bp|location=Sequence derived from alignment at H-akashiwo_Contig1090:123209..124110- (Heterosigma akashiwo CCMP452)back to top |