mRNA_H-akashiwo_Contig1089.9.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1089.9.1
Unique NamemRNA_H-akashiwo_Contig1089.9.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S4DB43_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB43_HETAK)

HSP 1 Score: 515 bits (1326), Expect = 4.110e-181
Identity = 260/276 (94.20%), Postives = 264/276 (95.65%), Query Frame = 1
Query:    1 AATPLKRRKAWKKAVVPWWTPELSVLKTRFRRARKERRRSAQNEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSYPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEASEDAAVATAQESVERQASQFENWCRLSLPDDDDGPFTMFELRREIFQRGGYKAPGPDMIIGRVL---IDEVAPHLASVTNACRDLGYFPRGWKVEDGVACAKPGRKDYTLMKAYRLLALLCAASKILEGMITSRVSWRAERGSWFHEHAYG 819
            AATPLKRRK+WKKAV PWWTPELS LK RFRRARK+RRRSAQ+EEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGS PISTIRGPDGVLISDPEQSVATLLDNFFPDKAAE SEDAAVA AQE VERQASQFENWCRLSLPDDDDGPFT FELRREIFQRGGYKAPGPDMIIGRVL   IDEV PHLASVTNACRDLGYFPRGWKVEDGVACAKPG+KDYTLMKAYRLLALLCAASKILEGMITSRVSWRAERGSWFHEHAYG
Sbjct:   37 AATPLKRRKSWKKAV-PWWTPELSALKVRFRRARKKRRRSAQHEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSNPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEVSEDAAVAAAQECVERQASQFENWCRLSLPDDDDGPFTTFELRREIFQRGGYKAPGPDMIIGRVLKECIDEVEPHLASVTNACRDLGYFPRGWKVEDGVACAKPGKKDYTLMKAYRLLALLCAASKILEGMITSRVSWRAERGSWFHEHAYG 311          
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S3Y2G0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2G0_HETAK)

HSP 1 Score: 503 bits (1294), Expect = 3.470e-178
Identity = 257/277 (92.78%), Postives = 262/277 (94.58%), Query Frame = 1
Query:    1 AATPLKRRKAWKKAVVPWWTPELSVLKTRFRRARKERRRSAQNEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSYPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEASEDAAVATAQESVERQASQFENWCRLSLPDDDDGPFTMFELRREIFQRGGYKAPGPDMIIGRVL---IDEVAPHLASVTNACRDLGYFPRGWKVEDGVACAKPGRKDYTLMKAYRLLALLCAASKILEGMITSRVS-WRAERGSWFHEHAYG 819
            AATPLKRRK+WKKAV PWWTPELS LK RFRRARK+RRRSAQ+EEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGS PISTIRGPDGVLISDPEQSVATLLDNFFPDKAAE SEDA VA AQESVERQASQFENWCRLSLPDDDDGPFT FELRREIFQRGGYKAPGPDMIIGRVL   IDEV PHLASVTNACRDLGYFPRGWKVEDGVACAKPG+KDYTLMKAYRLLALLCAASKILEGM+TSRVS WRAER SWFHE AYG
Sbjct:   37 AATPLKRRKSWKKAV-PWWTPELSALKVRFRRARKKRRRSAQHEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSNPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEVSEDATVAAAQESVERQASQFENWCRLSLPDDDDGPFTTFELRREIFQRGGYKAPGPDMIIGRVLKECIDEVEPHLASVTNACRDLGYFPRGWKVEDGVACAKPGKKDYTLMKAYRLLALLCAASKILEGMMTSRVSSWRAERRSWFHEPAYG 312          
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S4DBB4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBB4_HETAK)

HSP 1 Score: 306 bits (785), Expect = 8.880e-103
Identity = 158/168 (94.05%), Postives = 161/168 (95.83%), Query Frame = 1
Query:    1 AATPLKRRKAWKKAVVPWWTPELSVLKTRFRRARKERRRSAQNEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSYPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEASEDAAVATAQESVERQASQFENWCRLSLPDDDDGPFTMFELRR 504
            AATPLKRRK+WKKAV PWWTPELS LK RFRRARK+RRRSAQ+EEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGS PISTIRGPDGVLISDPEQSVATLLDNFFPDKAAE SEDA VA AQESVERQASQFENWCRLSLPDDDDGPFTMFELRR
Sbjct:   37 AATPLKRRKSWKKAV-PWWTPELSALKVRFRRARKKRRRSAQHEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSNPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEVSEDATVAAAQESVERQASQFENWCRLSLPDDDDGPFTMFELRR 203          
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S4D502_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D502_HETAK)

HSP 1 Score: 232 bits (592), Expect = 2.470e-70
Identity = 129/278 (46.40%), Postives = 175/278 (62.95%), Query Frame = 1
Query:    1 AATPLKRRKAWKKAVVPWWTPELSVLKTRFRRARKERRRSAQNEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSYPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEASE--DAAVATAQESVERQASQFENWCRLSLPDDDDGPFTMFELRREIFQRGGYKAPGPDMIIGRVLIDE---VAPHLASVTNACRDLGYFPRGWKVEDGVACAKPGRKDYTLMKAYRLLALLCAASKILEGMITSRVSWRAERGSWFHEHAYG 819
            AATP ++R  WKK+V PWWT EL  +K  F RARK RRRS  + +E+QR  +    AMR AK  SW+KFCS    P+  + K+LKG    PISTI+  +G +I+DP+QSV  ++D F+PD AAE  E  D  +A A+  +  +A  FE  CR  LP++ + P T  E+R  + +R G+KAPGPDM+ GRVL +    + P+L  + NAC  LGYFP  WKV+  +A +KPG+  Y ++KAYRL+ LLC   K LEG++  R SW AE+    H   YG
Sbjct:   21 AATPRRKRPLWKKSV-PWWTEELGRVKKAFYRARKLRRRSEWHRQEYQRMAVEXXXAMRRAKADSWKKFCSEVDNPWDMILKILKGERPSPISTIKDAEGRVIADPQQSVQAMVDGFWPD-AAEGEEEGDEELAAARAQLAGRAQAFEEECRRRLPEEGELPLTEEEVRWVVMRRRGFKAPGPDMVYGRVLAEAGEILMPYLRPLYNACLKLGYFPGKWKVDLEIALSKPGKPSYDVIKAYRLICLLCEMGKDLEGLLARRQSWWAEQEGRLHPRQYG 296          
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S3Y0N8_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N8_HETAK)

HSP 1 Score: 220 bits (560), Expect = 2.790e-65
Identity = 116/276 (42.03%), Postives = 174/276 (63.04%), Query Frame = 1
Query:    4 ATPLKRRKAWKKAVVPWWTPELSVLKTRFRRARKERRRSAQNEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSYPISTIRGPDGVLISDPEQSVATLLDNFFPDKA-AEASEDAAVATAQESVERQASQFENWCRLSLPDDDDGPFTMFELRREIFQRGGYKAPGPDMIIGRVL---IDEVAPHLASVTNACRDLGYFPRGWKVEDGVACAKPGRKDYTLMKAYRLLALLCAASKILEGMITSRVSWRAERGSWFHEHAYG 819
            A P K+R  W+++V PWW+PEL  +K  F RA+K R RS  +  +++ +R A+  + R AK+ SWRK C+    P+G +Y+VLKG  S P+ST++G DG +I+DPE+SV  ++++F+P+ A  E  E   +A  ++++E +A  +E  CR +LPD+++ P+T +E+R    +  G+KAPGPDMI G+VL    +E+ PH+  + NA   LGY PR WK +   A  K  +KDYT++KAYRLL+L     K  E +   R  WRAE   W H   YG
Sbjct:   72 ACPKKKRPPWRRSV-PWWSPELGEVKRAFYRAKKRRFRSVGHMADYEEKRRAWRTSYRRAKQASWRKTCTEAGTPWGLIYRVLKGTTSNPVSTVKGADGHIIADPEESVRYMMNSFWPEDAEGEGQETEVLARLRQAIEERARAYEEQCRRALPDEEEPPYTEYEVRSVTGRARGHKAPGPDMICGQVLQALTEELLPHVTQLYNAGLALGYHPRPWKGDLEKAAPKADKKDYTVVKAYRLLSLTDELGKDQERLGVRRFMWRAENQGWIHPRQYG 346          
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S4DD44_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD44_HETAK)

HSP 1 Score: 216 bits (551), Expect = 9.770e-61
Identity = 117/262 (44.66%), Postives = 161/262 (61.45%), Query Frame = 1
Query:   46 VPWWTPELSV-LKTRFRRARKERRRSAQNEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSYPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEASEDAAVATAQESVERQASQFENWCRLSLPDDDDGPFTMFELRREIFQRGGYKAPGPDMIIGR---VLIDEVAPHLASVTNACRDLGYFPRGWKVEDGVACAKPGRKDYTLMKAYRLLALLCAASKILEGMITSRVSWRAERGSWFHEHAYG 819
            VPWW+PEL   +K  F RARK R RS  +  +F+ +R A+  A R AKR SWRK CS    P+G  Y+VLKG  S P+ST++G DG +ISDPE SV  ++++F+P+      +   +   +  +E +A ++E WCR +LPD  +  ++  E+RR + +  GYKAPGPDMI G+   VL DE+ PHLA + NA   LGYF R WK +  VA  KPG+KD+T+ KAYR+L+L     K  E +   R +WRAE   W H    G
Sbjct:    4 VPWWSPELMPNIKRAFYRARKNRFRSVLHMVDFEAKRSAWVTAYRRAKRESWRKVCSEAGSPWGLTYRVLKGSTSNPVSTVKGADGKIISDPEASVRFMMNSFWPEDTEGDEQGGEIERLRCEIEERAREYEGWCRRALPDQGEPLYSQEEVRRVVGRSRGYKAPGPDMICGKLLEVLCDELLPHLAELYNAGLTLGYFARPWKGDLEVALGKPGKKDFTVYKAYRMLSLTNEMGKDQEYLGVRRFNWRAENQGWIHPSQSG 265          
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S3Y0V7_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0V7_HETAK)

HSP 1 Score: 176 bits (445), Expect = 1.600e-49
Identity = 89/210 (42.38%), Postives = 132/210 (62.86%), Query Frame = 1
Query:  202 KFCSGEKQPFGRVYKVLKGRGSYPISTIRGPDGVLISDPEQSVATLLDNFFPDKA-AEASEDAAVATAQESVERQASQFENWCRLSLPDDDDGPFTMFELRREIFQRGGYKAPGPDMIIGRVL---IDEVAPHLASVTNACRDLGYFPRGWKVEDGVACAKPGRKDYTLMKAYRLLALLCAASKILEGMITSRVSWRAERGSWFHEHAYG 819
            K C+G   P+G +Y+VLKG  S P+ST++G DG +I+DPE+SV  ++++F+P+ A  E  E   +A  ++++E +A  +E  CR +LPD+++ P+T +E+R    +  G+KAPGPDMI G+VL    +E+ PH+  + NA   LGY PR WK +   A  K  +KDYT++KAYRLL+L     K  E +   R  WRAE   W H   YG
Sbjct:   11 KTCTGAGTPWGLIYRVLKGTTSNPVSTVKGADGHIIADPEESVRYMMNSFWPEDAEGEGQETEVLARLRQAIEERARAYEEQCRRALPDEEEPPYTEYEVRSVTGRARGHKAPGPDMICGQVLQALTEELLPHVTQLYNAGLALGYHPRPWKGDLEKAAPKADKKDYTVVKAYRLLSLTDELGKDQERLGVRRFMWRAENQGWIHPRQYG 220          
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S3XPL3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPL3_HETAK)

HSP 1 Score: 156 bits (395), Expect = 6.960e-42
Identity = 92/136 (67.65%), Postives = 102/136 (75.00%), Query Frame = 1
Query:   46 VPWWTPELSVLKTRFRRARKERRRSAQNEEEFQRERLAFNRAMRTAKRRSWRKFCSGEKQP-FGRVYK-VLKGRGSYPISTIRGPDGVLISDPEQSVATLLDNFFPDKAAEASEDAAVATAQESVERQASQFENWC 447
            VPWWTPELSVLKTRFRRARK+RRRS+Q+EEE Q E LA NR M TAK RSW KFCS +KQP F  VYK +L+GRGS PI            D E+SV+TLL+N FPD+AAEASEDAAVA  QE VER  SQFEN C
Sbjct:   61 VPWWTPELSVLKTRFRRARKKRRRSSQHEEELQCELLALNRPMHTAKSRSWHKFCSEDKQPPFDGVYKAILQGRGSNPII-----------DTERSVSTLLNNLFPDRAAEASEDAAVAAVQERVERWVSQFENLC 185          
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S4DEI5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEI5_HETAK)

HSP 1 Score: 128 bits (322), Expect = 2.910e-32
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 1
Query:    1 AATPLKRRKAWKKAVVPWWTPELSVLKTRFRRARKERRRSAQNEEEFQRERLAFNRAMRTAKRRSWRKFCS 213
            AATPLKRRKAWKKAV PWWTPE+SVLKTRFRRARK+RRRSAQ+EEEFQRERLAFNRAMRTAKRRSWRKFCS
Sbjct:  188 AATPLKRRKAWKKAV-PWWTPEISVLKTRFRRARKKRRRSAQHEEEFQRERLAFNRAMRTAKRRSWRKFCS 257          
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Match: A0A7S3Y8X9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8X9_HETAK)

HSP 1 Score: 128 bits (322), Expect = 1.290e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 1
Query:    1 AATPLKRRKAWKKAVVPWWTPELSVLKTRFRRARKERRRSAQNEEEFQRERLAFNRAMRTAKRRSWRKFCS 213
            AATPLKRRKAWKKAV PWWTPE+SVLKTRFRRARK+RRRSAQ+EEEFQRERLAFNRAMRTAKRRSWRKFCS
Sbjct:  254 AATPLKRRKAWKKAV-PWWTPEISVLKTRFRRARKKRRRSAQHEEEFQRERLAFNRAMRTAKRRSWRKFCS 323          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1089.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DB43_HETAK4.110e-18194.20Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y2G0_HETAK3.470e-17892.78Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4DBB4_HETAK8.880e-10394.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D502_HETAK2.470e-7046.40Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y0N8_HETAK2.790e-6542.03Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A7S4DD44_HETAK9.770e-6144.66Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y0V7_HETAK1.600e-4942.38Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3XPL3_HETAK6.960e-4267.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DEI5_HETAK2.910e-3294.37Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y8X9_HETAK1.290e-3194.37Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1089contigH-akashiwo_Contig1089:257500..258318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7029.ACYPI40599-PA
Preferred nameDEPDC5
PFAMsDEP,Exo_endo_phos_2,IML1,RVT_1
Model size819
Max annot lvl2759|Eukaryota
KEGG koko:K20404
KEGG Pathwayko04150,map04150
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000323,GO:0003006,GO:0003674,GO:0005096,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005829,GO:0006950,GO:0007154,GO:0007276,GO:0007281,GO:0007282,GO:0007292,GO:0007293,GO:0008047,GO:0008150,GO:0008283,GO:0008356,GO:0008361,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010506,GO:0010646,GO:0010648,GO:0016020,GO:0016043,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023057,GO:0030154,GO:0030234,GO:0030695,GO:0030727,GO:0031090,GO:0031323,GO:0031329,GO:0031667,GO:0031668,GO:0031669,GO:0032006,GO:0032007,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032991,GO:0033554,GO:0034198,GO:0035859,GO:0042594,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044877,GO:0045792,GO:0048134,GO:0048135,GO:0048142,GO:0048468,GO:0048471,GO:0048477,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0051704,GO:0051716,GO:0060589,GO:0065007,GO:0065008,GO:0065009,GO:0071496,GO:0071840,GO:0090066,GO:0098588,GO:0098772,GO:0098805,GO:0098852,GO:1902531,GO:1902532,GO:1903432,GO:1904262,GO:1990130,GO:1990928
Exons1
Evalue2.05e-23
EggNOG OGsKOG1075@1|root,KOG3572@1|root,KOG1075@2759|Eukaryota,KOG3572@2759|Eukaryota,3AEDR@33154|Opisthokonta
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size819
COG categoryS
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387073.4789112-CDS-H-akashiwo_Contig1089:257499..2583181681387073.4789112-CDS-H-akashiwo_Contig1089:257499..258318Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1089 257500..258318 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1089.9.1prot_H-akashiwo_Contig1089.9.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1089 257500..258318 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1089.9.1

>prot_H-akashiwo_Contig1089.9.1 ID=prot_H-akashiwo_Contig1089.9.1|Name=mRNA_H-akashiwo_Contig1089.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=273bp
AATPLKRRKAWKKAVVPWWTPELSVLKTRFRRARKERRRSAQNEEEFQRE
RLAFNRAMRTAKRRSWRKFCSGEKQPFGRVYKVLKGRGSYPISTIRGPDG
VLISDPEQSVATLLDNFFPDKAAEASEDAAVATAQESVERQASQFENWCR
LSLPDDDDGPFTMFELRREIFQRGGYKAPGPDMIIGRVLIDEVAPHLASV
TNACRDLGYFPRGWKVEDGVACAKPGRKDYTLMKAYRLLALLCAASKILE
GMITSRVSWRAERGSWFHEHAYG
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mRNA from alignment at H-akashiwo_Contig1089:257500..258318+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1089.9.1 ID=mRNA_H-akashiwo_Contig1089.9.1|Name=mRNA_H-akashiwo_Contig1089.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=819bp|location=Sequence derived from alignment at H-akashiwo_Contig1089:257500..258318+ (Heterosigma akashiwo CCMP452)
GCAGCCACCCCACTGAAGCGCCGTAAGGCGTGGAAGAAGGCAGTGGTGCC ATGGTGGACGCCTGAGCTCTCTGTGCTGAAGACGCGCTTCCGCCGGGCTC GCAAGGAGAGAAGGAGGTCAGCGCAGAACGAGGAGGAGTTCCAGCGCGAG CGCCTGGCTTTCAACCGGGCCATGCGCACGGCCAAGCGGCGGAGCTGGCG CAAGTTCTGCTCGGGGGAGAAGCAGCCCTTCGGCCGGGTCTACAAGGTCC TAAAGGGCCGGGGGTCCTACCCCATCTCCACAATCAGGGGGCCGGACGGG GTCCTCATCTCGGACCCTGAGCAGTCGGTTGCCACCCTTCTGGACAACTT CTTCCCGGACAAGGCGGCTGAGGCGAGCGAGGACGCAGCTGTCGCCACTG CACAGGAGAGTGTGGAACGCCAGGCGAGCCAATTTGAGAACTGGTGCCGC CTCAGCCTGCCTGACGACGACGACGGGCCGTTCACCATGTTTGAGCTCCG CCGGGAAATCTTCCAGAGGGGCGGCTACAAGGCCCCTGGCCCTGATATGA TCATCGGGCGGGTGCTCATAGACGAGGTCGCGCCACATCTGGCCAGCGTG ACTAACGCCTGCAGGGATCTCGGCTATTTCCCCCGCGGCTGGAAGGTGGA GGACGGGGTGGCCTGCGCCAAGCCGGGGAGGAAGGATTACACGCTGATGA AGGCGTACAGGCTGCTGGCTCTGCTCTGCGCCGCGAGCAAGATCCTGGAG GGTATGATAACCTCGAGGGTGTCTTGGCGGGCGGAGCGCGGGAGCTGGTT CCACGAGCACGCGTATGGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1089:257500..258318+

>mRNA_H-akashiwo_Contig1089.9.1 ID=mRNA_H-akashiwo_Contig1089.9.1|Name=mRNA_H-akashiwo_Contig1089.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=819bp|location=Sequence derived from alignment at H-akashiwo_Contig1089:257500..258318+ (Heterosigma akashiwo CCMP452)
GCAGCCACCCCACTGAAGCGCCGTAAGGCGTGGAAGAAGGCAGTGGTGCC
ATGGTGGACGCCTGAGCTCTCTGTGCTGAAGACGCGCTTCCGCCGGGCTC
GCAAGGAGAGAAGGAGGTCAGCGCAGAACGAGGAGGAGTTCCAGCGCGAG
CGCCTGGCTTTCAACCGGGCCATGCGCACGGCCAAGCGGCGGAGCTGGCG
CAAGTTCTGCTCGGGGGAGAAGCAGCCCTTCGGCCGGGTCTACAAGGTCC
TAAAGGGCCGGGGGTCCTACCCCATCTCCACAATCAGGGGGCCGGACGGG
GTCCTCATCTCGGACCCTGAGCAGTCGGTTGCCACCCTTCTGGACAACTT
CTTCCCGGACAAGGCGGCTGAGGCGAGCGAGGACGCAGCTGTCGCCACTG
CACAGGAGAGTGTGGAACGCCAGGCGAGCCAATTTGAGAACTGGTGCCGC
CTCAGCCTGCCTGACGACGACGACGGGCCGTTCACCATGTTTGAGCTCCG
CCGGGAAATCTTCCAGAGGGGCGGCTACAAGGCCCCTGGCCCTGATATGA
TCATCGGGCGGGTGCTCATAGACGAGGTCGCGCCACATCTGGCCAGCGTG
ACTAACGCCTGCAGGGATCTCGGCTATTTCCCCCGCGGCTGGAAGGTGGA
GGACGGGGTGGCCTGCGCCAAGCCGGGGAGGAAGGATTACACGCTGATGA
AGGCGTACAGGCTGCTGGCTCTGCTCTGCGCCGCGAGCAAGATCCTGGAG
GGTATGATAACCTCGAGGGTGTCTTGGCGGGCGGAGCGCGGGAGCTGGTT
CCACGAGCACGCGTATGGG
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