mRNA_H-akashiwo_Contig1089.11.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: A0A7S3UUC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUC1_HETAK) HSP 1 Score: 124 bits (311), Expect = 1.940e-33 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
Query: 28 MILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
MILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP
Sbjct: 1 MILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 62
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: W7T5H8_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5H8_9STRA) HSP 1 Score: 125 bits (313), Expect = 9.990e-32 Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 1
Query: 1 AADGDADRNMILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
AADGDADRNMILGR FFVTPSDSLAI+ AHA+ IPFFRDQGG++GVARSMPTS AVDLVAKR N+ LFETP
Sbjct: 784 AADGDADRNMILGRQFFVTPSDSLAIIVAHADVIPFFRDQGGLRGVARSMPTSGAVDLVAKRMNMSLFETP 854
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: A0A7R9ZHS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHS4_9STRA) HSP 1 Score: 114 bits (285), Expect = 3.540e-30 Identity = 56/71 (78.87%), Postives = 62/71 (87.32%), Query Frame = 1
Query: 1 AADGDADRNMILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
AADGD DRNMILG FFVTPSDSLAI+AA+A++IPFFR QGG+KGVARSMPTS AVDLVAK +LFETP
Sbjct: 113 AADGDGDRNMILGTQFFVTPSDSLAIIAAYADSIPFFRTQGGLKGVARSMPTSGAVDLVAKDMGFDLFETP 183
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: A0A7S4JVZ9_9STRA (Hypothetical protein (Fragment) n=5 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVZ9_9STRA) HSP 1 Score: 112 bits (281), Expect = 5.590e-30 Identity = 56/71 (78.87%), Postives = 61/71 (85.92%), Query Frame = 1
Query: 1 AADGDADRNMILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
AADGD DRNMILG FFVTPSDSLAI+AA+A+AIPFF QGG+KGVARSMPTS AVDLVAK +LFETP
Sbjct: 54 AADGDGDRNMILGSQFFVTPSDSLAIIAAYADAIPFFAAQGGLKGVARSMPTSGAVDLVAKDLGFDLFETP 124
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: A0A7S3LY69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LY69_9STRA) HSP 1 Score: 115 bits (288), Expect = 7.480e-30 Identity = 56/71 (78.87%), Postives = 62/71 (87.32%), Query Frame = 1
Query: 1 AADGDADRNMILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
AADGDADRNMILGR FFVTPSDSLA++AAHA+ IPFF QGG++ VARSMPTS AVDLVA+R NL LFE P
Sbjct: 203 AADGDADRNMILGRKFFVTPSDSLAVLAAHADLIPFFSQQGGLRSVARSMPTSGAVDLVAQRLNLNLFEVP 273
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: A0A7S3Q0F0_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0F0_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.680e-29 Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 1
Query: 1 AADGDADRNMILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
AADGDADRNMILG FFVTPSDSLAI+AA+A+AIPFF+ QGG+KGVARSMPTS AVDLVAK N +LFETP
Sbjct: 764 AADGDADRNMILGTQFFVTPSDSLAIIAAYADAIPFFKAQGGLKGVARSMPTSGAVDLVAKDLNFDLFETP 834
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: A0A6V1U5R2_HETAK (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U5R2_HETAK) HSP 1 Score: 117 bits (293), Expect = 5.020e-29 Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 1
Query: 1 AADGDADRNMILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
AADGDADRNMILGR FFVTPSDS+AI+AAHA+ IPFFRDQGG+KGVARSMPTS A++ VA R NL FETP
Sbjct: 739 AADGDADRNMILGRRFFVTPSDSVAILAAHADVIPFFRDQGGLKGVARSMPTSGALERVAARLNLPFFETP 809
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: A0A7S2I2V0_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2V0_9STRA) HSP 1 Score: 117 bits (292), Expect = 6.850e-29 Identity = 58/71 (81.69%), Postives = 63/71 (88.73%), Query Frame = 1
Query: 1 AADGDADRNMILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
AADGD DRNMILG FFVTPSDSLAI+AA+A+AIPFFR QGG+KGVARSMPTS AVDLVAK N +LFETP
Sbjct: 775 AADGDGDRNMILGSQFFVTPSDSLAIIAAYADAIPFFRVQGGLKGVARSMPTSGAVDLVAKDLNFDLFETP 845
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: A0A7R9WTY5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTY5_9STRA) HSP 1 Score: 115 bits (289), Expect = 9.360e-29 Identity = 56/71 (78.87%), Postives = 62/71 (87.32%), Query Frame = 1
Query: 1 AADGDADRNMILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
AADGD DRNMILG FFV+PSDSLA++AA++NAIPFFR QGG+KGVARSMPTS AVDLVAK N LFETP
Sbjct: 229 AADGDGDRNMILGSKFFVSPSDSLAVIAAYSNAIPFFRSQGGLKGVARSMPTSGAVDLVAKDMNFALFETP 299
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Match: A0A7S4NAS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NAS9_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.130e-28 Identity = 56/71 (78.87%), Postives = 61/71 (85.92%), Query Frame = 1
Query: 1 AADGDADRNMILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVAKRYNLELFETP 213
AADGD DRNMILG FFVTPSDSLAI+AA+A+AIPFF QGG+KGVARSMPTS AVDLVAK +LFETP
Sbjct: 207 AADGDGDRNMILGSQFFVTPSDSLAIIAAYADAIPFFAAQGGLKGVARSMPTSGAVDLVAKDLGFDLFETP 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1089.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1089.11.1 >prot_H-akashiwo_Contig1089.11.1 ID=prot_H-akashiwo_Contig1089.11.1|Name=mRNA_H-akashiwo_Contig1089.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=62bp MILGRNFFVTPSDSLAIVAAHANAIPFFRDQGGIKGVARSMPTSAAVDLVback to top mRNA from alignment at H-akashiwo_Contig1089:335555..340268- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1089.11.1 ID=mRNA_H-akashiwo_Contig1089.11.1|Name=mRNA_H-akashiwo_Contig1089.11.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=4714bp|location=Sequence derived from alignment at H-akashiwo_Contig1089:335555..340268- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1089:335555..340268- >mRNA_H-akashiwo_Contig1089.11.1 ID=mRNA_H-akashiwo_Contig1089.11.1|Name=mRNA_H-akashiwo_Contig1089.11.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=186bp|location=Sequence derived from alignment at H-akashiwo_Contig1089:335555..340268- (Heterosigma akashiwo CCMP452)back to top |