mRNA_H-akashiwo_Contig1088.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 445 bits (1145), Expect = 5.340e-155 Identity = 216/287 (75.26%), Postives = 246/287 (85.71%), Query Frame = 1
Query: 4 SFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTTATDLNPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYLKGTQSERLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKNIMWLRHLLLVDLSCPQVEPTPVVEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIQMHYAKTSDQLADIFTKALNAEVFD 864
S S++S+TD G LT ILGIKV RD NKCF+LSQ SF++DA++KFGLDYLPAC+TP+ DL PTPGFKA L DAN YRSMVGTLAWVANWTRPELAF VHKLQR Q NPEPKHFEA QR FRYLKGTQSE LRLGGDLVLRA++D+DFC DR+DGKSVTGY++ LGD+PIVW+SKLQ AVTTSTVEAEYLALRS +K+IMWLR LL ++ CPQ EPTPVVEDNSAC+EWA DM+V+++ RHFHVSYHLAKEQV LGTI+M Y KT DQ+ADI TKALNA F+
Sbjct: 56 SLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLL-EEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 341
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 226 bits (575), Expect = 8.330e-64 Identity = 118/279 (42.29%), Postives = 172/279 (61.65%), Query Frame = 1
Query: 19 FSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTTATD--LNPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYLKGTQSERLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKNIMWLRHLLLVDLSCPQVEPTPVVEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIQMHYAKTSDQLADIFTKALN 849
++++D+G + SILGIKV RD T + LSQ SF+ +A KF + P+ D +N + S +A ++RS+VGT+ W+A WT PE+A+++H L + +P A+ + RYL T+ + + LGG L L AY DADFC +R G+S +G+ I LG SPI+W+S++Q VT +T EAEY++LR+ + ++MWL+ LL L Q P+ EDN ACI WA D VS+ RH HVSYH KE V+ I++ Y T Q+AD+FTK L+
Sbjct: 706 YNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLL-ESLGYKQ-GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 198 bits (504), Expect = 4.320e-59 Identity = 94/127 (74.02%), Postives = 105/127 (82.68%), Query Frame = 1
Query: 4 SFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTTATDLNPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYL 384
S S++++TD G LT ILGIKV RD NKCF+LSQ SF++DA++KFGLDYLPAC+TP+ DL PTPGFKA L DAN YRSMVGTLAWVANWTRPELAF VHKLQR Q NPEPKHFEA QR FRYL
Sbjct: 142 SLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A409X0Q5_9AGAR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409X0Q5_9AGAR) HSP 1 Score: 185 bits (469), Expect = 3.430e-50 Identity = 111/296 (37.50%), Postives = 168/296 (56.76%), Query Frame = 1
Query: 13 SRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFG-LDYLPACRTPMTTATDLNPTPGFKASLPDANR----------YRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYLKGTQSERLRLGGD--LVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKNIMWLRHLLLVDLSCPQVEPTPVVEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIQMHYAKTSDQLADIFTKALNAEVF 861
S++ +TDLG I+GI + RD N+ YLSQ + + S+FG D LPA TPM PG K ++P YRS++G + ++A TRP+++FA+ L ++ + + H+ AA RV RYLKGT+S RL LGGD + L YTD+D+ Q + KSV+GY LGD I W ++ Q V+TS+ EAEY+A K +WLR++L +L + +P + DN+A I + D + + +H + YH +++V+ + +H T D +ADIFTKAL+ F
Sbjct: 372 SKWQVTDLGEPKHIVGIGIHRDRPNRKIYLSQTALIDRLTSQFGQTDALPAS-TPMD--------PGLKLTVPAKGSVDRTITSKLPYRSLIGAMLYIAVGTRPDISFAIQNLSQFLDTYDQSHWNAAIRVLRYLKGTRSLRLALGGDNGISLLGYTDSDWSQCINNRKSVSGYGFTLGDGLISWCARKQRTVSTSSCEAEYIAAFEATKEALWLRNILS-ELDLIKPDPVRIECDNTAAIRLSEDPSLHARVKHIDIKYHFIRDRVQKKQVFLHQIGTKDNIADIFTKALDKNTF 657
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 179 bits (454), Expect = 4.400e-50 Identity = 104/282 (36.88%), Postives = 159/282 (56.38%), Query Frame = 1
Query: 19 FSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTTATDLN----PTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYLKGTQSERLRLGGDLV--LRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKNIMWLRHLLLVDLSCPQVEPTPVVEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIQMHYAKTSDQLADIFTKAL 846
F + DLG + ILGI+V D K L Q ++ D + +F TP+ + + P + ++ +RS++G+L+++A TRP++A AV +L RY NP +H++AA ++ RYLKGT++ + GG + L AY+DAD+ DR D +SV+G V+ML +P+VW + Q V ST EAEY+AL +K MW R LLL +L Q T + EDN I AR+ +T+H + YH +E++ G I++ Y T +Q+AD TK L
Sbjct: 95 FKLKDLGAVRYILGIEVHHDIAEKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQEEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWAR-LLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A6A4DK21_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DK21_9STRA) HSP 1 Score: 176 bits (447), Expect = 6.110e-50 Identity = 102/282 (36.17%), Postives = 158/282 (56.03%), Query Frame = 1
Query: 19 FSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTTATDLN----PTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYLKGTQSERLRLGGDLV--LRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKNIMWLRHLLLVDLSCPQVEPTPVVEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIQMHYAKTSDQLADIFTKAL 846
F + DLG + ILGI+V D +K L Q ++ D + +F TP+ + + P + ++ +RS++G+L+++A TRP++A AV +L RY NP +H++AA ++ RYLKGT++ + G + L AY+DAD+ DR D +SV+G V+ML +P+VW + Q V ST E EY+AL +K MW R LLL +L Q T + EDN I AR+ +T+H + YH +E++ G I++ Y T +Q+AD TK L
Sbjct: 15 FKLKDLGAVRYILGIEVHHDIADKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQAEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFDGKMPPELIAYSDADWGSDRDDRRSVSGTVLMLFSAPVVWKTGFQKTVALSTTETEYMALTMCVKECMWAR-LLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 295
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A507DR08_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DR08_9FUNG) HSP 1 Score: 186 bits (472), Expect = 6.490e-50 Identity = 112/297 (37.71%), Postives = 169/297 (56.90%), Query Frame = 1
Query: 1 SSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTTATDLNP--TPGFKASL-PDANRYRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYLKGTQSERLRLGGDLV-LRAYTDADFCQDRIDGKSVTGYVIMLGDS-PIVWASKLQTAVTTSTVEAEYLALRSGLKNIMWLRHLLLVDLSCPQ-----VEPTPVVEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIQMHYAKTSDQLADIFTKALNAEVF 861
+S + F+ T+LG + LG++V RD+T YL Q S+V D + +FG+ TPM T L P K S P YR +VG+L ++ TRP++A AV L R+ +NP P+H +AA+RV RYL+GT + L +GG+ V L Y+DAD+ + ID +S+TGY+ +G++ P+ WASK Q V S+ EAEY+AL + WLR LL +L P+ T + +DN +CI A + V +T+H + +H ++ V+ I + Y T++ +AD TK L A F
Sbjct: 439 ASLHNEFNTTNLGKVNHYLGMRVRRDYTRHVIYLDQESYVNDILERFGMQDCKPVNTPMDQ-TKLEPYEVENTKTSPNPQEGEYREIVGSLMYLMICTRPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSTYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFCIGNAGPVTWASKRQPTVALSSTEAEYMALSFATQETTWLRSLLQ-ELQIPEYLDENARSTTIYKDNQSCISLAMNPVHHARTKHIDIRHHFIRDHVDK-EIHLEYLPTAEMVADSLTKPLPAPAF 732
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A2N9J7J4_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J7J4_FAGSY) HSP 1 Score: 186 bits (471), Expect = 1.810e-49 Identity = 107/278 (38.49%), Postives = 153/278 (55.04%), Query Frame = 1
Query: 16 RFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTTATDLNPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYLKGTQSERLRLGGD--LVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKNIMWLRHLLLVDLSCPQVEPTPVVEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIQMHYAKTSDQLADIFTKA 843
+F + DLG L+ LG++V+ ++ C+YLSQA + D +SK GL TP+ LN T G L DA YR +VG+L ++ TRP+LA+AVH + ++ + P H+ A R+ RY+KGT L L LRAY DAD+ D D +S TGY +LG S I W SK Q+ V S+ EAEY AL ++WLR LL D+ PQ TP+ DN + I A + V T+H + H + ++ + + + DQLAD+FTK+
Sbjct: 941 QFEMKDLGTLSYFLGLEVTS--SSDCYYLSQAKYASDLLSKAGLTDSKTVSTPLELNVKLNTTDG--EPLSDATLYRQLVGSLIYLTV-TRPDLAYAVHLVSQFMSAPRSTHYAAVLRILRYIKGTLFHGLHFSAQSSLELRAYADADWAGDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADATSELLWLRWLL-ADMGAPQTTSTPIHRDNRSAIHIAHNDVFHEHTKHIEIDCHFIRHHLQQSALHLLSVSSEDQLADVFTKS 1212
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A2I0WZT5_9ASPA (Putative mitochondrial protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WZT5_9ASPA) HSP 1 Score: 176 bits (445), Expect = 2.320e-49 Identity = 102/283 (36.04%), Postives = 165/283 (58.30%), Query Frame = 1
Query: 16 RFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTTATDLNPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYLKGTQSERLRL-GGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKNIMWLRHLLLVDLSCPQVEPTPVVEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIQMHYAKTSDQLADIFTKALNAEVF 861
RF++ +LGP++ LG++V HT F+LSQ+ + + K G++ TP+ + T +P+ S A Y +VG+L ++ TRP++A+ V++L +Y + P HF +R+ +YL+GT S L L +L LRAY+D+D+ D +D KS TGY LG + I W K Q V S+ EAEY AL + +I+WL+ LL + PTP+ DN + I A + V +T+H + +H +E ++ T+Q+H+ ++DQ+AD+FTKAL+ + F
Sbjct: 31 RFNMRNLGPISHFLGMQVL--HTPSGFHLSQSRYAAQILKKAGMENSKPISTPIASKTLCHPSS--LLSTDTAALYTQLVGSLQYLT-LTRPDIAYTVNRLCQYMHQPHEDHFRLLKRLLQYLQGTLSFGLPLVAANLHLRAYSDSDWAGDLVDRKSTTGYCAFLGSNLISWQVKKQKTVARSSTEAEYRALATAATDIIWLKRLL-AEFQINSSTPTPLFCDNVSSIALANNPVFHARTKHIEIDFHFVRECIKNATLQVHHIHSTDQIADLFTKALSLQRF 307
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Match: A0A6A3GI70_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GI70_9STRA) HSP 1 Score: 174 bits (442), Expect = 3.980e-49 Identity = 103/292 (35.27%), Postives = 162/292 (55.48%), Query Frame = 1
Query: 1 SSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMT-----TATDLNPTPGFKASLPDANRYRSMVGTLAWVANWTRPELAFAVHKLQRYQNNPEPKHFEAAQRVFRYLKGTQSERLRLGGDL--VLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKNIMWLRHLLLVDLSCPQVEPTPVVEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVELGTIQMHYAKTSDQLADIFTKALNAE 855
+ +F I D+G ILGI++ D + +S ++ I KFG + C TP+ T D T KA + + YRS+VG+L ++A TRP+++ AV KL R+ NP KH++A +V RYL T+ + G L L AY+DAD+ +R D +SV+G ++ML +P+VW S Q V S+ EAEY+AL +K +W+R LL D+ QV T + EDN + A+++ +T+H + YH +E+V +++ Y T++QLAD TK L+++
Sbjct: 16 AGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISHKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMK-SKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLK-DIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSDEVELQYVDTNNQLADFMTKCLSSK 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1088.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1088.3.1 >prot_H-akashiwo_Contig1088.3.1 ID=prot_H-akashiwo_Contig1088.3.1|Name=mRNA_H-akashiwo_Contig1088.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=288bp SSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDback to top mRNA from alignment at H-akashiwo_Contig1088:313545..314408+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1088.3.1 ID=mRNA_H-akashiwo_Contig1088.3.1|Name=mRNA_H-akashiwo_Contig1088.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=864bp|location=Sequence derived from alignment at H-akashiwo_Contig1088:313545..314408+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1088:313545..314408+ >mRNA_H-akashiwo_Contig1088.3.1 ID=mRNA_H-akashiwo_Contig1088.3.1|Name=mRNA_H-akashiwo_Contig1088.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=864bp|location=Sequence derived from alignment at H-akashiwo_Contig1088:313545..314408+ (Heterosigma akashiwo CCMP452)back to top |