mRNA_H-akashiwo_Contig1087.5.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1087.5.1
Unique NamemRNA_H-akashiwo_Contig1087.5.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 503 bits (1296), Expect = 1.250e-174
Identity = 243/344 (70.64%), Postives = 289/344 (84.01%), Query Frame = 1
Query:  439 LTLHDFLLEQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFLPACRTPMNTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSDRLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLRTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAEVFER 1470
            + LHD L    F RS +ESCLY  ++   G + M+AVYVDDLV+S +  +VV+  K S AS++++TD G L  ILGIKV RD RNKCF+LSQ SFI+DA++KFGLD+LPAC+TP++   DLTPTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYLKGTQS+ LRLGGDLVLRA++D+DFC DR+DGKSVTGY++ LGD+PIVW+SKL+ AVTTSTVEAEYLALRS +KDIMWLR LL ++ CPQ EPTPV+EDNSAC+EWA DM+V+++ RHFHVSYHLAKEQV+LGTIRM Y +T DQ+ADI TKALNA  FER
Sbjct:    1 MELHDHLESLGFKRSGHESCLYIHRDG--GNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFER 342          
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK)

HSP 1 Score: 462 bits (1188), Expect = 2.100e-157
Identity = 228/281 (81.14%), Postives = 249/281 (88.61%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGASVIGTRWVLSKKFGPMAISSNIRLAFVAQGFTQREGVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLSGDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLLEQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFLPACRTPMNTATDLTPTPGFKSSLPDSN 843
            Y+QAMLKE+ SMESH VK+LVDLPPGA  IGTRW+LSKKF         +   VAQGFTQREGVDF TTYSPVIAAPSLRLMLSIAANKGHAVE+LDISTAFL+ DI G V  KQPPGFVDK+HP KVWKLKKALYGLRQSPR+WY TLH+FLL+QNFVRSDYESCLYTRKN  TGED+M+AVYVDDLVLSSNIPSVV+SLK+SF SRF+ITDLGPL SILGIKV+RD  NKCFYLSQASF+RDAISKFGLD+LPACRTPM  ATDLTPTPGFK+SLPD+N
Sbjct:  129 YDQAMLKELDSMESHGVKELVDLPPGAHAIGTRWILSKKFDADGNLQKYKARLVAQGFTQREGVDFSTTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409          
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 396 bits (1017), Expect = 1.990e-124
Identity = 203/486 (41.77%), Postives = 307/486 (63.17%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGASVIGTRWVLSKKFGPMAISSNIRLAFVAQGFTQREGVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLSGDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLLEQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFLPACRTPMNTATDLTPTPGFKSSLP--DSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSDRLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLRTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALN 1452
            + +A+  E  S+  H+V +LVD P GA+++G RW+L+KK+      S  +    AQG++Q EGVD+  T+SPV+++ SLR +L+IAA++   +  +DI TAFL G +   +  KQP G+       KV KLKK+LYGL+Q+P+ WY  L+ FLL+Q + R+ Y+SC+Y++ + +TG  ++I+VYVDD+VL+S+  S ++ +K + +  +N++D+G ++SILGIKV RD   +   LSQ SFI +A  KF +        P+N   D+         L   ++ ++RS+VGT+ W+A WT PE+A+++H L +  ++P      A+    RYL  T+   + LGG L L AY DADFC +R  G+S +G+ I LG SPI+W+S+++  VT +T EAEY++LR+ + D+MWL+ LL  L   Q    P+ EDN ACI WA D  VS+  RH HVSYH  KE V    I + Y  T  Q+AD+FTK L+
Sbjct:  499 WREAVADEYDSLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVS-STGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982          
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 369 bits (948), Expect = 3.300e-123
Identity = 178/268 (66.42%), Postives = 216/268 (80.60%), Query Frame = 1
Query:  187 GVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLSGDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLLEQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFLPACRTPMNTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYL 990
            G+DF  TYSPV+ A SLRL+L+I+ANKG+AV+SLDISTAFL+G +   V  +QPP +VD  HP+KVWKL KALYGL+QSPR+WY+ LHD L    F RS +ESCLY  ++   G + M+AVYVDDLV+S +  ++V+  K S AS++N+TD G L  ILGIKV RD RNKCF+LSQ SFI+DA++KFGLD+LPAC+TP++   DLTPTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYL
Sbjct:    3 GIDFQQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDG--GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268          
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK)

HSP 1 Score: 373 bits (958), Expect = 2.480e-122
Identity = 185/231 (80.09%), Postives = 204/231 (88.31%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGASVIGTRWVLSKKFGPMAISSNIRLAFVAQGFTQREGVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLSGDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLLEQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRN 693
            Y++AMLKE+GSMESHDVK+LVDLPPGA+VIGTRWVLSKKF         +   VAQGFTQREGVDF  TYSPV+AAPSLRLMLSIAANKGHAVE+LDISTAFL+ DI G V  KQPPGFVDK+HP KVWKLKKALYGLRQSPR+WY TLH+FLL+QNFVRSDYESCLYTRKN  TGED+M+AVYVDDLVLSSNIPSVV+SLK+SF SRF+ITDLGPL SILGIKV+RD  N
Sbjct:  200 YDRAMLKELGSMESHDVKELVDLPPGANVIGTRWVLSKKFDADGNLQKYKARLVAQGFTQREGVDFSATYSPVVAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTN 430          
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A5N6MBA7_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MBA7_9ASTR)

HSP 1 Score: 314 bits (805), Expect = 4.780e-97
Identity = 174/490 (35.51%), Postives = 283/490 (57.76%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGASVIGTRWVLSKKFGPMAISSNIRLAFVAQGFTQREGVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLSGDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLLEQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFLPACRTPMNTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSDRLRLGGDLVLR--AYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLRTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAEVF 1464
            ++ AM +EM +++ +   DL  LP G +V+G +W    K GP    +  +   VA+G++Q EGVD+  T++PV    ++R++++IAA++G  +  LD+ TAFL+GD+   +   QP GF  K    KV++L+KALYGL+Q+PR WY  +  + L+  F+RS  E  LY  KN A  E   + +YVDD+V +S+   ++   KTS  S F+++D+G L   LG++V +  +    ++SQ  + ++ +SKFG++      TPMN    L      +S   D + YRS+VG L ++ + TRP+LAF+V  + R+   P   H  A +R  RY+ GT    L      VL+   YTD+D+     D KSV+  V MLG+  I W+S+ ++ V  S+ EAEY+A  +     +WLR +L DL C Q  PT +  DN + I  +R+ ++  +++H  + +H  ++ V    I++ +  T++QLAD+ TKA + E F
Sbjct:   12 WQSAMREEMEALKKNKTWDLTSLPAGKNVVGVKWTYKTKIGPSGEVTRHKARLVAKGYSQVEGVDYTETFAPVARFETIRVIIAIAAHRGWELHQLDVKTAFLNGDLTEEIYVSQPEGFEVKGSETKVYRLRKALYGLKQAPRAWYSKIDGYFLKNGFLRSHSEPTLYV-KNSADQEIMYVCLYVDDIVCTSSSTRLIQQFKTSMKSEFDMSDIGLLRYFLGLEVYQ--KKDGIFVSQTQYAKNLLSKFGMNKAKCDGTPMNVGEKLQVED--ESGRVDDSNYRSIVGGLIYLTH-TRPDLAFSVSMVSRFMQRPTKTHQGAVRRVLRYVAGTCDFGLWFSRKNVLQLVGYTDSDWAGCIDDRKSVSANVFMLGNCAISWSSRKQSTVALSSSEAEYIAATAAACQGVWLRRILEDLGCDQELPTTIFCDNKSAINLSRNPIMHSRSKHIELKHHFIRDLVKQNVIQLEFCGTNEQLADMLTKAFSKEKF 495          
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A5N6NKC8_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NKC8_9ASTR)

HSP 1 Score: 320 bits (821), Expect = 5.420e-97
Identity = 177/492 (35.98%), Postives = 294/492 (59.76%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGASVIGTRWVLSKKFGPMAISSNIRLAFVAQGFTQREGVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLSGDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLLEQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFLPACRTPMNTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSDRLRLGGDLVLR--AYTDADF--CQDRIDGKSVTGYVIMLGDSPIVWASKLRTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAEVF 1464
            ++ AM +E+ +++ ++  DL DLP G + +G +W    K GP    S  +   VA+G++Q EG+D+  T++PV    ++R++++IAA++G  +  LD+ TAFL+G++   +  +QP GFV K + DKV+KL+KALYGL+Q+PR WY  +  + L+  FVRS  E  LY +++   G    + +YVDD+V +S+   ++   K+S  S F ++D+G L   LG++VT+   N   ++ Q+ + ++ +SKFGL+      TPMN    L    G  S   D   YRS VG L ++ + TRP+LA++V  + R+  NP   H  A +R  RY+ GT    L  G D  LR   YTD+D+  C D  D KSV+  + M+GDS + W+S+ +++V  S+ EAEY++  +     +WLR +L DL   Q++PT ++ DN + I  +R+ V+  +++H  + +H  +E V    + + +  T++QLAD+ TKA++ E F
Sbjct:  349 WQLAMKEEIAALKKNNTWDLTDLPEGKNAVGVKWTYKTKVGPDGEVSRYKARLVAKGYSQVEGIDYTETFAPVARFETIRVVIAIAAHRGWKLHQLDVKTAFLNGELTEEIYVQQPEGFVIKGNEDKVYKLRKALYGLKQAPRAWYAKIDGYFLKNGFVRSYSEPTLYIKESQDLGI-MYVCLYVDDIVCTSSCDELIIKFKSSMTSEFEMSDMGLLKFFLGLEVTQT--NDGVFVCQSQYAKNLLSKFGLNNSKPETTPMNVNEKLHQNDG--SGKADDVNYRSAVGGLIYLTH-TRPDLAYSVSVVSRFMHNPSKVHQGAVRRILRYVAGTYKMGLWYGKDKELRLLGYTDSDWGGCID--DRKSVSANIFMMGDSAVSWSSRKQSSVALSSSEAEYISASAAACQCVWLRRILEDLGLFQSDPTVILCDNKSAINLSRNPVMHNRSKHIELKHHFIRELVIQEQVLLEFCGTNEQLADMLTKAISKEKF 832          
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A5E8C4Z1_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4Z1_9ASCO)

HSP 1 Score: 323 bits (829), Expect = 2.080e-96
Identity = 182/489 (37.22%), Postives = 279/489 (57.06%), Query Frame = 1
Query:    7 QAMLKEMGSMESHDVKDLVDLPPGASVIGTRWVLSKKFGPMAISSNIRLAFVAQGFTQREGVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLSGDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLLEQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFLPACRTPMNTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSDRLRLGGDLVLR--AYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLRTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAEVFE 1467
            +A + EM S++ +   +LVDLPPG   I ++WV   K          +   V  GF+Q EG+D+  T++PV+   ++R++L+IAA  G  V  +D+ TAFL+GD+   +  +QP GFV K    KV  LKK+LYGL+Q+P  W   +H  L++  F+R++ +  +YT+ + +T    +IA+YVDDL++S N   V+   K+S +S F + DLGP++  LG++V +   +    +S+  +I D + +FG+    + +TP+ T  DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  NP+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+ D KS TGYV +L   PI WA + + +  +S+VE+EY++L    K+  W+  LL     P   P  + EDN  CI  A++ V  R+T+H  V YH+ +  +  G I + Y  T   LAD+FTK L    FE
Sbjct:  559 EACVIEMSSLKRNGTWELVDLPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKVCHLKKSLYGLKQAPLCWNEKIHGALVKLGFIRNESDYGVYTKGSGSTMV--IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYHITVDVSR--YIFDMLEEFGMQNCSSVKTPLPTR-DLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQNPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPIPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFE 1041          
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A5E8CAT7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8CAT7_9ASCO)

HSP 1 Score: 322 bits (824), Expect = 2.650e-96
Identity = 181/489 (37.01%), Postives = 279/489 (57.06%), Query Frame = 1
Query:    7 QAMLKEMGSMESHDVKDLVDLPPGASVIGTRWVLSKKFGPMAISSNIRLAFVAQGFTQREGVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLSGDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLLEQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFLPACRTPMNTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSDRLRLGGDLVLR--AYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLRTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAEVFE 1467
            +A + EM S++ +   +LVDLPPG   I ++WV   K          +   V  GF+Q EG+D+  T++PV+   ++R++L+IAA  G  V  +D+ TAFL+GD+   +  +QP GFV K    KV  LKK+LYGL+Q+P  W   +H  L++  F+R++ +  +YT+ + +T    +IA+YVDDL++S N   V+   K+S +S F + DLGP++  LG++V +   +    +S+  +I D + +FG+    + +TP+ T  DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  +P+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+ D KS TGYV +L   PI WA + + +  +S+VE+EY++L    K+  W+  LL     P   P  + EDN  CI  A++ V  R+T+H  V YH+ +  +  G I + Y  T   LAD+FTK L    FE
Sbjct:  467 EACVIEMSSLKRNGTWELVDLPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKVCHLKKSLYGLKQAPLCWNEKIHGALVKLGFIRNESDYGVYTKGSGSTMV--IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYHITVDVSR--YIFDMLEEFGMQNCSSVKTPLPTR-DLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQSPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPIPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFE 949          
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT)

HSP 1 Score: 310 bits (793), Expect = 3.370e-96
Identity = 174/504 (34.52%), Postives = 278/504 (55.16%), Query Frame = 1
Query:    1 YEQAMLKEMGSMESHDVKDLVDLPPGASVIGTRWVLSKKFGPMAISSNIRLAFVAQGFTQREGVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLSGDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLLEQNFVRSDYESCLYTR--KNPATGEDSMI--AVYVDDLVLSSNIPSVVNSLKTSFASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFLPACRTPMNTATD--LTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSDRLRL--------GGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLRTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHLAKEQVNLGTIRMHYARTSDQLADIFTKALNAEVFER 1470
            ++QA+ +E  S+ S++  +LV  P G +VIG++WV+  K          +   VAQG++Q  G+++   +SPV    S+R +L++A      +  +D+ TAFL+G I   +   QP GFVD+ HP+ V KLKK+LYGL+QS R W  TL  FL +  + +S+ ++C+Y +  KN   G  S +  AVYVDD++  SN  +++N+ K      F +TD G +  ILG+ + RD   K  ++SQ  ++   + +FG+       TP+ T          GF     D N Y+  +G L +++  TRP+++  V  L  Y SNP  +H+   +R  RY+KGT +  L+          GD  L  Y+DA++  D    +S +GYV  + +S + W SK + +VT ST EAEY+AL    ++ +W+R LL D+ C   EPT + EDN   IE +++     +T+H  V +H  +E+V    +++ Y  T   LADI TK L  ++F+R
Sbjct:   29 WKQALKEEYNSLISNETWELVPPPEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKND-NGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGF-----DKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGD-ELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQR 525          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1087.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK1.250e-17470.64Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y3B6_HETAK2.100e-15781.14Hypothetical protein (Fragment) n=6 Tax=Heterosigm... [more]
A0A7S3Y1P1_HETAK1.990e-12441.77Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6S2_HETAK3.300e-12366.42Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y3C5_HETAK2.480e-12280.09Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A5N6MBA7_9ASTR4.780e-9735.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6NKC8_9ASTR5.420e-9735.98Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8C4Z1_9ASCO2.080e-9637.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8CAT7_9ASCO2.650e-9637.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9JFU5_PARCT3.370e-9634.52Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1087contigH-akashiwo_Contig1087:358194..359663 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog164328.Phyra85518
PFAMsDUF4219,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size1470
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.2e-91
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QH4V@4776|Peronosporales
DescriptionGAG-pre-integrase domain
Cds size1458
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387073.073442-UTR-H-akashiwo_Contig1087:358193..3582051681387073.073442-UTR-H-akashiwo_Contig1087:358193..358205Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1087 358194..358205 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387073.0845401-CDS-H-akashiwo_Contig1087:358205..3596631681387073.0845401-CDS-H-akashiwo_Contig1087:358205..359663Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1087 358206..359663 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1087.5.1prot_H-akashiwo_Contig1087.5.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1087 358206..359663 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1087.5.1

>prot_H-akashiwo_Contig1087.5.1 ID=prot_H-akashiwo_Contig1087.5.1|Name=mRNA_H-akashiwo_Contig1087.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=486bp
MLKEMGSMESHDVKDLVDLPPGASVIGTRWVLSKKFGPMAISSNIRLAFV
AQGFTQREGVDFGTTYSPVIAAPSLRLMLSIAANKGHAVESLDISTAFLS
GDIGGGVNEKQPPGFVDKNHPDKVWKLKKALYGLRQSPRIWYLTLHDFLL
EQNFVRSDYESCLYTRKNPATGEDSMIAVYVDDLVLSSNIPSVVNSLKTS
FASRFNITDLGPLDSILGIKVTRDLRNKCFYLSQASFIRDAISKFGLDFL
PACRTPMNTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFT
VHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSDRLRLGGDLVLRAYTDADF
CQDRIDGKSVTGYVIMLGDSPIVWASKLRTAVTTSTVEAEYLALRSGLKD
IMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVVSRKTRHFHVSYHL
AKEQVNLGTIRMHYARTSDQLADIFTKALNAEVFER
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mRNA from alignment at H-akashiwo_Contig1087:358194..359663+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1087.5.1 ID=mRNA_H-akashiwo_Contig1087.5.1|Name=mRNA_H-akashiwo_Contig1087.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1470bp|location=Sequence derived from alignment at H-akashiwo_Contig1087:358194..359663+ (Heterosigma akashiwo CCMP452)
TACGAGCAGGCCATGCTCAAAGAGATGGGTAGTATGGAATCTCATGATGT TAAAGACCTAGTGGATCTTCCTCCCGGTGCCAGCGTCATTGGTACCAGAT GGGTCTTGTCGAAGAAATTCGGCCCGATGGCAATCTCCTCAAATATAAGG CTCGCTTTTGTCGCCCAAGGCTTCACACAACGCGAGGGTGTCGATTTTGG CACAACCTACAGTCCCGTTATCGCAGCTCCCAGTCTTAGGCTTATGCTCT CTATAGCTGCCAACAAAGGGCACGCTGTGGAGTCTTTGGACATATCTACT GCGTTCTTGAGCGGTGACATCGGCGGGGGCGTAAACGAAAAACAACCGCC TGGGTTTGTGGACAAGAATCATCCCGACAAGGTTTGGAAGCTGAAAAAGG CTCTCTATGGCCTACGCCAGTCACCAAGAATCTGGTATCTTACCCTGCAT GACTTCCTCCTTGAGCAAAACTTCGTCCGCAGTGACTACGAGTCCTGCCT CTACACTCGCAAGAATCCTGCCACTGGAGAGGACTCTATGATTGCAGTGT ATGTGGATGATCTGGTCCTGAGTAGCAATATTCCTTCTGTCGTTAATAGT CTCAAAACCTCCTTTGCCTCGCGTTTCAACATCACCGATCTTGGTCCTCT CGACTCCATTCTCGGCATCAAGGTGACTCGGGACCTTCGTAATAAGTGCT TCTATCTGAGTCAGGCTTCTTTCATCAGGGATGCCATCTCCAAGTTCGGT TTGGACTTCCTGCCAGCTTGCCGCACTCCCATGAACACCGCCACTGATTT GACTCCCACGCCTGGCTTCAAGTCTTCCTTGCCTGATTCCAACAGGTATA GATCGATGGTTGGCACCCTAGCTTGGGTGGCCAACTGGACCCGGCCTGAG CTTGCTTTTACTGTGCACAAGCTTCAAAGGTATCAAAGTAACCCTGAGCC CAAGCATTTTGAGGCTGCCCAAAGAGCATTCAGATATCTCAAAGGCACCC AATCTGATAGGCTGAGGCTTGGGGGGGACCTGGTCCTCCGTGCATACACT GATGCTGACTTCTGTCAGGACAGAATTGATGGCAAGTCTGTCACTGGCTA TGTGATCATGCTTGGGGACTCACCTATTGTGTGGGCCTCAAAGCTTCGGA CTGCAGTTACTACATCCACTGTGGAGGCTGAGTATCTGGCACTGAGATCT GGGCTTAAGGACATAATGTGGCTTAGGCATCTTCTTGTGGACCTTGCATG CCCTCAGGCTGAGCCTACACCAGTCATTGAGGACAACTCTGCCTGTATTG AGTGGGCAAGGGATATGGTTGTTTCCAGAAAAACCAGGCACTTTCATGTG TCATACCACCTGGCTAAAGAGCAAGTGAACCTTGGGACCATCAGGATGCA CTATGCCAGGACCAGTGATCAGTTGGCTGACATATTCACAAAGGCTTTGA ATGCAGAAGTTTTTGAGAGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1087:358194..359663+

>mRNA_H-akashiwo_Contig1087.5.1 ID=mRNA_H-akashiwo_Contig1087.5.1|Name=mRNA_H-akashiwo_Contig1087.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1458bp|location=Sequence derived from alignment at H-akashiwo_Contig1087:358194..359663+ (Heterosigma akashiwo CCMP452)
ATGCTCAAAGAGATGGGTAGTATGGAATCTCATGATGTTAAAGACCTAGT
GGATCTTCCTCCCGGTGCCAGCGTCATTGGTACCAGATGGGTCTTGTCGA
AGAAATTCGGCCCGATGGCAATCTCCTCAAATATAAGGCTCGCTTTTGTC
GCCCAAGGCTTCACACAACGCGAGGGTGTCGATTTTGGCACAACCTACAG
TCCCGTTATCGCAGCTCCCAGTCTTAGGCTTATGCTCTCTATAGCTGCCA
ACAAAGGGCACGCTGTGGAGTCTTTGGACATATCTACTGCGTTCTTGAGC
GGTGACATCGGCGGGGGCGTAAACGAAAAACAACCGCCTGGGTTTGTGGA
CAAGAATCATCCCGACAAGGTTTGGAAGCTGAAAAAGGCTCTCTATGGCC
TACGCCAGTCACCAAGAATCTGGTATCTTACCCTGCATGACTTCCTCCTT
GAGCAAAACTTCGTCCGCAGTGACTACGAGTCCTGCCTCTACACTCGCAA
GAATCCTGCCACTGGAGAGGACTCTATGATTGCAGTGTATGTGGATGATC
TGGTCCTGAGTAGCAATATTCCTTCTGTCGTTAATAGTCTCAAAACCTCC
TTTGCCTCGCGTTTCAACATCACCGATCTTGGTCCTCTCGACTCCATTCT
CGGCATCAAGGTGACTCGGGACCTTCGTAATAAGTGCTTCTATCTGAGTC
AGGCTTCTTTCATCAGGGATGCCATCTCCAAGTTCGGTTTGGACTTCCTG
CCAGCTTGCCGCACTCCCATGAACACCGCCACTGATTTGACTCCCACGCC
TGGCTTCAAGTCTTCCTTGCCTGATTCCAACAGGTATAGATCGATGGTTG
GCACCCTAGCTTGGGTGGCCAACTGGACCCGGCCTGAGCTTGCTTTTACT
GTGCACAAGCTTCAAAGGTATCAAAGTAACCCTGAGCCCAAGCATTTTGA
GGCTGCCCAAAGAGCATTCAGATATCTCAAAGGCACCCAATCTGATAGGC
TGAGGCTTGGGGGGGACCTGGTCCTCCGTGCATACACTGATGCTGACTTC
TGTCAGGACAGAATTGATGGCAAGTCTGTCACTGGCTATGTGATCATGCT
TGGGGACTCACCTATTGTGTGGGCCTCAAAGCTTCGGACTGCAGTTACTA
CATCCACTGTGGAGGCTGAGTATCTGGCACTGAGATCTGGGCTTAAGGAC
ATAATGTGGCTTAGGCATCTTCTTGTGGACCTTGCATGCCCTCAGGCTGA
GCCTACACCAGTCATTGAGGACAACTCTGCCTGTATTGAGTGGGCAAGGG
ATATGGTTGTTTCCAGAAAAACCAGGCACTTTCATGTGTCATACCACCTG
GCTAAAGAGCAAGTGAACCTTGGGACCATCAGGATGCACTATGCCAGGAC
CAGTGATCAGTTGGCTGACATATTCACAAAGGCTTTGAATGCAGAAGTTT
TTGAGAGG
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