mRNA_H-akashiwo_Contig1085.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A4Q3HFF6_9SPHI (Transposase n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q3HFF6_9SPHI) HSP 1 Score: 98.2 bits (243), Expect = 1.130e-19 Identity = 81/256 (31.64%), Postives = 125/256 (48.83%), Query Frame = 1
Query: 37 GRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVINSRQYKTKEIKSYDAKYPLHILQMDLIDYSKKPAR--QFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDR-------KPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEGNKMT-SGKTWVDYMKDMTKLYNSNVHSST-GFPPKIALKAQVNDEVFENIREKQEKRNANKEDVN-REAVFNVGDKVRLKV 768
G L++ I N N + ++D++ +K+N ++ + S + K K AK P DLID S +F YILV +DL+SRF +T AL K ++ M D KPK ++SDNG EF F + L+++ IKH+FT HSP N VER N +++L + W ++K +TK+ N SS FP K+ Q+ E E +++ K + + RE GDKVR+++
Sbjct: 78 GLKNLWHLIANEYLN---ISRNDVKSLMKQNGLYQVVSEPVRDKGRKII-AKRPGDFFACDLIDMSGSSPNNPRFRYILVCVDLYSRFTFTHALRNKTNLNNVSLSMDECLDEAENEHGIKPKVVISDNGLEFAGRFHEMLQQKHIKHIFTRSHSPNDNSIVERRNKEIRRILRAFSVHFKNNEWWTHLKKVTKVLNQTYISSIKSFPDKL-FSEQIPPEENERLQKIMNKAEVAMQKLRQREGHLQDGDKVRIRM 328
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: UPI001EE4FD0B (uncharacterized protein LOC124270833 isoform X1 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE4FD0B) HSP 1 Score: 93.2 bits (230), Expect = 4.190e-18 Identity = 84/288 (29.17%), Postives = 141/288 (48.96%), Query Frame = 1
Query: 1 LDKLYFDK---GMKMGRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVINSR-QYKTKEIKSYDAKYPLHILQMDLIDYSK--KPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEGNKMTSGKT--WVDYMKDMTKLYNSNVHSSTGFPPKIALKAQVND----EVFENIREKQEKRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVV 828
L+K YF+ G G KL + N HK+K ++ ++ + ++ ++K K +K + +DL D S+ K Y+LV +D+ SR+ + LT K+P+ V AF +I +PKK+ +D+GSEF AEF +LK++ I H + + ++ VERFN T K L+ MT T ++D + ++ YN HSS P+++ AQVN +V++++ K ++ + VGD VR+ K K +T+EL+ V
Sbjct: 15 LEKYYFNAQNPGAYFGPSKLRDELKKN--KQHKIKLRKVKRFVNNQDAYTLHKPVKHKFKRLK-VRVNSINEMFDVDLTDLSRFSKENDGIRYLLVAIDILSRYAFVLPLTNKKPESVFKAFKEILNTSQPKKVRTDDGSEFKAEFHSFLKRKNITHTIAHNEN-IKSNYVERFNRTLKSLIT-RYMTHNNTKRYLDVLPNLVNNYNHTQHSSL---PELSP-AQVNKTNELKVWQHLYVKPFMNQLKNLHSRKKFKYKVGDIVRIPYLKRAFSKELDLKWTQELFKV 293
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A816N4I7_9BILA (Hypothetical protein n=8 Tax=Rotaria TaxID=231623 RepID=A0A816N4I7_9BILA) HSP 1 Score: 94.0 bits (232), Expect = 5.550e-18 Identity = 67/217 (30.88%), Postives = 105/217 (48.39%), Query Frame = 1
Query: 211 QMDLIDYSKKPA--RQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEF-QQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYK-KLLEGNKMTSGKTWVDYMKDMTKLYNSNVHSSTGFPPK----IALKAQVNDEVFENIREKQEKRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVVKNI 837
Q DL+D K + NYIL ++D+FS++ W + +K D++ AF + +R K+ +D G EF+ + Q+ LKK + T + Q VERFN T K K+ + K W+D + + K YNS+ H S P+ I A+V +F I +KR FNVGD++R+ + K + NFT E+++V I
Sbjct: 296 QADLVDMQKYKTTNKNMNYILTIIDVFSKYAWAIPIQRKTGDEITKAFKNVFKERIASKLQTDKGLEFINKLTQELLKKHNVHWFATENETKAQV--VERFNRTLKSKMWKYFTENDTKKWIDILPALMKNYNSSYHRSIKMTPEQGSLIENSAEVYKNLFPKISSDLKKRK-----------FNVGDRIRISRKQKDFRKGYLPNFTTEIFIVNEI 499
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: UPI001EE572C9 (uncharacterized protein LOC124290564 isoform X2 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE572C9) HSP 1 Score: 92.8 bits (229), Expect = 5.810e-18 Identity = 67/193 (34.72%), Postives = 99/193 (51.30%), Query Frame = 1
Query: 106 IEEYLKRNQVHVINSRQYKTKEIKSYDAKYPLH-------------------ILQMDLIDYSK--KPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEGNKMTSGKT--WVDYMKDMTKLYNSNVHSS 615
+ + LK+N+ H I R K + +K+ DA Y LH + +DL D S+ K Y+LV +D+ SR+ + L K+P+ VL AF +I R+PKK+ +D GSEF A F+ YLKK+ I H T + ++ VERFN T K L+ MT T ++D + + YN +HSS
Sbjct: 35 LRDELKKNRQHHIRLRNVK-RFVKNQDA-YSLHRPVKHRFKRLKVRVNFMNEMFDVDLADLSRYSKENDGIRYLLVAIDILSRYAFVLPLENKKPESVLKAFKEILKTRQPKKVRTDAGSEFRAGFESYLKKKNITHTITRNEN-IKSNYVERFNRTLKSLIT-RYMTHNNTKYYIDVLPKLVHNYNHTLHSS 223
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A519RGX0_FLASP (Transposase n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A519RGX0_FLASP) HSP 1 Score: 93.2 bits (230), Expect = 6.520e-18 Identity = 87/275 (31.64%), Postives = 140/275 (50.91%), Query Frame = 1
Query: 1 LDKLYFDKGMKM----GRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVINSRQYKTKEIKSYDAKYPLHILQMDLIDYSK-KPAR-QFNYILVVLDLFSRFVWTFALTKKQP--------DKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEG-NKMTSGKTWVDYMKDMTKLYN-SNVHSSTGFPPKIALKAQVNDEVFENIREKQEKRNANKEDVN---REAVFNVGDKVRLKV 768
L+ LY ++G+ G L+ +I N + +++++ +L + ++ I + K K A+ P DL+D S P+ ++ YILVV+DL+SR+ +T L K D++L IN KPK ++SDNGSEFL F + L+++ IKH++T HSP QN VER N +K+L + W + +K T + N S++ S G P +I L+ N E +N R K+ A + + RE V + G KVR+K+
Sbjct: 62 LEWLYDERGIHFIASKGIKSLWNWIQREYIN---ITRAEVKAFLSKKGLYQITRESIQDKG-KVVVARKPNAFWGCDLVDMSAFGPSNGKYKYILVVVDLYSRYTFTRLLKNKTNLNNVSLAMDEILDQADDINRGAKPKVLISDNGSEFLGRFHELLRQKHIKHLYTQSHSPNQNAIVERRNKELRKVLNSFAAYRNSNHWWENLKSATLVLNQSHITSIGGSPDRIWLE---NIEPEDNERLKKIVNKAEQAMLKLRQREGVLHDGQKVRIKM 329
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A7J5V5N6_9BACT (Uncharacterized transposon-derived protein F54H12.3-like (Fragment) n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7J5V5N6_9BACT) HSP 1 Score: 91.3 bits (225), Expect = 1.100e-17 Identity = 85/290 (29.31%), Postives = 135/290 (46.55%), Query Frame = 1
Query: 1 LDKLYF---DKGMKMGRDKLFYYILNNTPNMHKVKKSDIEEYLKRN---QVHVINSRQYKTKE--IKSYDAKYPLHILQMDLIDYSKKPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFM---KINFDRKPKKIVSDNGSEFL-AEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYK-KLLEGNKMTSGKTWVDYMKDMTKLYNSNVHSSTGFPPKIALKAQVNDEVFENIREKQEKRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVVK 831
LDK+Y+ ++ G DKLF KV + IE YL + +H + +K ++ D ++ + M I + YIL V+D+FS++ W + K ++L AF KI RKP+KI +D G+EFL E Q+YLK EG+ H + HS + VERFN T K K+ + T+++ + D K YN ++H S G P K + D+++ + + + R+ VG K R+ KG K + N++ E + VK
Sbjct: 14 LDKIYYSPDEEASYSGVDKLFRVAKEKGL---KVSRKVIENYLGKQASYSLHKPARKNFKRNATVVRGIDQQWQADLADMQSISDDNDGVK---YILTVIDIFSKYAWAIPIKNKGSKEMLNAFQLLFKIAAPRKPEKIQTDEGTEFLNKELQKYLKSEGVHHFCS--HSDKKAAVVERFNRTLKTKIWKYFTAQQTYTYINKLADFVKSYNHSIHRSIGMRPSEVTKKEE-DKIWSKLYVENSPK--------RKKANIVGSKARISKWKGVFEKGYLPNWSEEHFHVK 286
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A6L4ZJ00_9BACT (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A6L4ZJ00_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 2.000e-17 Identity = 75/255 (29.41%), Postives = 124/255 (48.63%), Query Frame = 1
Query: 1 LDKLYFDKGMKMGRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVI---NSRQYKTKEIKSYDAKYPLHILQMDLIDYSKKPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKI--NFDRKPKKIVSDNGSEFLA-EFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLL-EGNKMTSGKTWVDYMKDMTKLYNSNVHSSTGFPPKIALKAQ------VNDEVFENIREKQEKRNANKEDVNR 726
L +++ +G GRDKL+ + N + + + E+LK+ +++ I KT+ D + + DLID+ K + +IL +DLFS+ + L K V++ I N D I SDNGSEF++ EF++ L+ IK VF+ PH+P NG VERFNG K+L+ + + + WV ++ + YNS+ + P +A V D +++ + K +K KE VN+
Sbjct: 13 LYNIFYVQGFLFGRDKLYKKSVELNFN---ISRRQVAEWLKKQEINQIFRPTKLATKTQPTVLNDIHKQIGV---DLIDFRNKENEENRWILTAIDLFSKKAYAQPLPNKTNKAVVSGMKTILDNIDNDISSIRSDNGSEFISKEFKKLLQDRNIKQVFSLPHTPQSNGQVERFNGIIKRLIRQFLYINNSYDWVKNLQTLVDNYNSSYQETIKDTPNNVEEADEDKKTVVKDNIYKAVAGKLQKDIIPKEVVNK 261
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: E4XJH8_OIKDI (Integrase catalytic domain-containing protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XJH8_OIKDI) HSP 1 Score: 92.0 bits (227), Expect = 2.630e-17 Identity = 77/268 (28.73%), Postives = 126/268 (47.01%), Query Frame = 1
Query: 67 NNTPNMHKVKKSDIEEYLKRNQVHVINSRQYKTKEI---KSYDAKYPLHILQMDLIDYSKKPARQ--FNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKI--NFDRKPKKIVSDNGSEFL-AEFQQYLKKEGIKH--VFTNPHSPFQNGNVERFNGTYKKLLEGNKMTSGKTWVDYMKDMTKLYNSNVHSSTGFPPKIALKAQVNDEVFENIREKQEKRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVVKNIR 840
N+T KK I ++L++N++H + R TK+I + KYP I DLIDY K FN+IL+++D F++FVWT L KK K I F P +++D G EF + ++ L++ GI H + T + + K L N + K+W+++++ +T YN HSS PK ++ EVF ++ + + + +G+ VR+K+ K K N+T ELY + +IR
Sbjct: 302 NDTKKKKPEKKPKIADFLRQNKIHSTHRRI--TKKIFPRRHIIVKYPKQIFMADLIDYQKDSYHNKGFNWILLIIDCFTKFVWTVPLKKKDGPKCANGLNDIFQEFTEWPNSLITDEGKEFYNKDVRKILERYGIHHYSIKTKMKASIAERAIRTLKSKIHKCLVKN---NSKSWIEFLQKITAGYNGTYHSSIKMEPK-SVNESNRKEVFASLFPEIDNVVTPR--------LKIGNIVRVKINKELFEKGFTRNWTTELYKIIDIR 555
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: UPI001EAFD334 (uncharacterized protein LOC124148213 n=5 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFD334) HSP 1 Score: 89.0 bits (219), Expect = 1.730e-16 Identity = 69/209 (33.01%), Postives = 110/209 (52.63%), Query Frame = 1
Query: 217 DLIDYSKKPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGN-VERFNGTYKKLLEGNKMTSGKT--WVDYMKDMTKLYNSNVHSSTGFPPKIALKAQVNDEVFENIREKQE--KRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVV 828
D+ YSK+ Y+LV +D+ SRF + LT K+P+ VL AF +I +R P K+ D GSEF F+ +L+K I T H+ N VERFN T K L+ +T T ++D + + YN+ +HSS + +K + +V+E++ K K+ ++K + ++ VF VGD VR+ + K +T+EL+ V
Sbjct: 93 DMTRYSKE-NNGVRYLLVAIDILSRFAFALPLTNKRPETVLKAFKEIIQERNPMKVRVDGGSEFKGVFKDFLEKHNI--TLTVAHNENIKSNYVERFNRTLKSLIT-RYLTHNNTKYYLDALPKLMDNYNNTLHSSLPNLSPVQVKKKNELKVWEHLYVKPLLLKKQSSKHNRSKAFVFKVGDLVRIPYLRRPFSKELDLKWTQELFKV 297
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: UPI001EE5C67A (uncharacterized protein LOC124278378 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5C67A) HSP 1 Score: 87.8 bits (216), Expect = 3.730e-16 Identity = 66/200 (33.00%), Postives = 106/200 (53.00%), Query Frame = 1
Query: 205 ILQMDLIDYSK--KPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEGNKMTSGKT--WVDYMKDMTKLYNSNVHSSTG--FPPKIALKAQVN--DEVFENIREKQEKRNANKEDVN------REAVFNVGDKVRL 762
+ +DL D S+ K Y+LV +D+ SR+ + L K+PD VL AF +I +RKP+K+ +D GSEF F+++L+KE I H + ++ VERFN T K L+ MT T +V+ + + YN +HSS P ++ + QV D V+ ++ ++K N+ +N + +F VGD VR+
Sbjct: 86 MFDVDLADMSRYTKFNENVRYLLVTVDILSRYAFVLPLVNKRPDTVLKAFKQIIKERKPRKVRTDAGSEFKGIFREFLEKENITHTIARNEN-IKSNYVERFNRTLKSLIT-RYMTHNNTKRYVNILPKLVYNYNHTLHSSLPELSPAQVTKENQVKVWDHVY--LKPIRKKINSTSTSMNISKPKAKRYLFKVGDLVRI 281 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1085.3.1 >prot_H-akashiwo_Contig1085.3.1 ID=prot_H-akashiwo_Contig1085.3.1|Name=mRNA_H-akashiwo_Contig1085.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=271bp MKMGRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVINSRQYKTKEIKback to top mRNA from alignment at H-akashiwo_Contig1085:170524..171363+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1085.3.1 ID=mRNA_H-akashiwo_Contig1085.3.1|Name=mRNA_H-akashiwo_Contig1085.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=840bp|location=Sequence derived from alignment at H-akashiwo_Contig1085:170524..171363+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1085:170524..171363+ >mRNA_H-akashiwo_Contig1085.3.1 ID=mRNA_H-akashiwo_Contig1085.3.1|Name=mRNA_H-akashiwo_Contig1085.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=813bp|location=Sequence derived from alignment at H-akashiwo_Contig1085:170524..171363+ (Heterosigma akashiwo CCMP452)back to top |