mRNA_H-akashiwo_Contig1085.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1085.3.1
Unique NamemRNA_H-akashiwo_Contig1085.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A4Q3HFF6_9SPHI (Transposase n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q3HFF6_9SPHI)

HSP 1 Score: 98.2 bits (243), Expect = 1.130e-19
Identity = 81/256 (31.64%), Postives = 125/256 (48.83%), Query Frame = 1
Query:   37 GRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVINSRQYKTKEIKSYDAKYPLHILQMDLIDYSKKPAR--QFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDR-------KPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEGNKMT-SGKTWVDYMKDMTKLYNSNVHSST-GFPPKIALKAQVNDEVFENIREKQEKRNANKEDVN-REAVFNVGDKVRLKV 768
            G   L++ I N   N   + ++D++  +K+N ++ + S   + K  K   AK P      DLID S       +F YILV +DL+SRF +T AL  K     ++  M    D        KPK ++SDNG EF   F + L+++ IKH+FT  HSP  N  VER N   +++L    +      W  ++K +TK+ N    SS   FP K+    Q+  E  E +++   K     + +  RE     GDKVR+++
Sbjct:   78 GLKNLWHLIANEYLN---ISRNDVKSLMKQNGLYQVVSEPVRDKGRKII-AKRPGDFFACDLIDMSGSSPNNPRFRYILVCVDLYSRFTFTHALRNKTNLNNVSLSMDECLDEAENEHGIKPKVVISDNGLEFAGRFHEMLQQKHIKHIFTRSHSPNDNSIVERRNKEIRRILRAFSVHFKNNEWWTHLKKVTKVLNQTYISSIKSFPDKL-FSEQIPPEENERLQKIMNKAEVAMQKLRQREGHLQDGDKVRIRM 328          
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: UPI001EE4FD0B (uncharacterized protein LOC124270833 isoform X1 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE4FD0B)

HSP 1 Score: 93.2 bits (230), Expect = 4.190e-18
Identity = 84/288 (29.17%), Postives = 141/288 (48.96%), Query Frame = 1
Query:    1 LDKLYFDK---GMKMGRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVINSR-QYKTKEIKSYDAKYPLHILQMDLIDYSK--KPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEGNKMTSGKT--WVDYMKDMTKLYNSNVHSSTGFPPKIALKAQVND----EVFENIREKQEKRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVV 828
            L+K YF+    G   G  KL   +  N    HK+K   ++ ++     + ++   ++K K +K         +  +DL D S+  K      Y+LV +D+ SR+ +   LT K+P+ V  AF +I    +PKK+ +D+GSEF AEF  +LK++ I H   +  +  ++  VERFN T K L+    MT   T  ++D + ++   YN   HSS    P+++  AQVN     +V++++  K            ++  + VGD VR+   K    K     +T+EL+ V
Sbjct:   15 LEKYYFNAQNPGAYFGPSKLRDELKKN--KQHKIKLRKVKRFVNNQDAYTLHKPVKHKFKRLK-VRVNSINEMFDVDLTDLSRFSKENDGIRYLLVAIDILSRYAFVLPLTNKKPESVFKAFKEILNTSQPKKVRTDDGSEFKAEFHSFLKRKNITHTIAHNEN-IKSNYVERFNRTLKSLIT-RYMTHNNTKRYLDVLPNLVNNYNHTQHSSL---PELSP-AQVNKTNELKVWQHLYVKPFMNQLKNLHSRKKFKYKVGDIVRIPYLKRAFSKELDLKWTQELFKV 293          
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A816N4I7_9BILA (Hypothetical protein n=8 Tax=Rotaria TaxID=231623 RepID=A0A816N4I7_9BILA)

HSP 1 Score: 94.0 bits (232), Expect = 5.550e-18
Identity = 67/217 (30.88%), Postives = 105/217 (48.39%), Query Frame = 1
Query:  211 QMDLIDYSKKPA--RQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEF-QQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYK-KLLEGNKMTSGKTWVDYMKDMTKLYNSNVHSSTGFPPK----IALKAQVNDEVFENIREKQEKRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVVKNI 837
            Q DL+D  K     +  NYIL ++D+FS++ W   + +K  D++  AF  +  +R   K+ +D G EF+ +  Q+ LKK  +    T   +  Q   VERFN T K K+ +       K W+D +  + K YNS+ H S    P+    I   A+V   +F  I    +KR            FNVGD++R+   +    K  + NFT E+++V  I
Sbjct:  296 QADLVDMQKYKTTNKNMNYILTIIDVFSKYAWAIPIQRKTGDEITKAFKNVFKERIASKLQTDKGLEFINKLTQELLKKHNVHWFATENETKAQV--VERFNRTLKSKMWKYFTENDTKKWIDILPALMKNYNSSYHRSIKMTPEQGSLIENSAEVYKNLFPKISSDLKKRK-----------FNVGDRIRISRKQKDFRKGYLPNFTTEIFIVNEI 499          
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: UPI001EE572C9 (uncharacterized protein LOC124290564 isoform X2 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE572C9)

HSP 1 Score: 92.8 bits (229), Expect = 5.810e-18
Identity = 67/193 (34.72%), Postives = 99/193 (51.30%), Query Frame = 1
Query:  106 IEEYLKRNQVHVINSRQYKTKEIKSYDAKYPLH-------------------ILQMDLIDYSK--KPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEGNKMTSGKT--WVDYMKDMTKLYNSNVHSS 615
            + + LK+N+ H I  R  K + +K+ DA Y LH                   +  +DL D S+  K      Y+LV +D+ SR+ +   L  K+P+ VL AF +I   R+PKK+ +D GSEF A F+ YLKK+ I H  T   +  ++  VERFN T K L+    MT   T  ++D +  +   YN  +HSS
Sbjct:   35 LRDELKKNRQHHIRLRNVK-RFVKNQDA-YSLHRPVKHRFKRLKVRVNFMNEMFDVDLADLSRYSKENDGIRYLLVAIDILSRYAFVLPLENKKPESVLKAFKEILKTRQPKKVRTDAGSEFRAGFESYLKKKNITHTITRNEN-IKSNYVERFNRTLKSLIT-RYMTHNNTKYYIDVLPKLVHNYNHTLHSS 223          
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A519RGX0_FLASP (Transposase n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A519RGX0_FLASP)

HSP 1 Score: 93.2 bits (230), Expect = 6.520e-18
Identity = 87/275 (31.64%), Postives = 140/275 (50.91%), Query Frame = 1
Query:    1 LDKLYFDKGMKM----GRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVINSRQYKTKEIKSYDAKYPLHILQMDLIDYSK-KPAR-QFNYILVVLDLFSRFVWTFALTKKQP--------DKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEG-NKMTSGKTWVDYMKDMTKLYN-SNVHSSTGFPPKIALKAQVNDEVFENIREKQEKRNANKEDVN---REAVFNVGDKVRLKV 768
            L+ LY ++G+      G   L+ +I     N   + +++++ +L +  ++ I     + K  K   A+ P      DL+D S   P+  ++ YILVV+DL+SR+ +T  L  K          D++L     IN   KPK ++SDNGSEFL  F + L+++ IKH++T  HSP QN  VER N   +K+L       +   W + +K  T + N S++ S  G P +I L+   N E  +N R K+    A +  +    RE V + G KVR+K+
Sbjct:   62 LEWLYDERGIHFIASKGIKSLWNWIQREYIN---ITRAEVKAFLSKKGLYQITRESIQDKG-KVVVARKPNAFWGCDLVDMSAFGPSNGKYKYILVVVDLYSRYTFTRLLKNKTNLNNVSLAMDEILDQADDINRGAKPKVLISDNGSEFLGRFHELLRQKHIKHLYTQSHSPNQNAIVERRNKELRKVLNSFAAYRNSNHWWENLKSATLVLNQSHITSIGGSPDRIWLE---NIEPEDNERLKKIVNKAEQAMLKLRQREGVLHDGQKVRIKM 329          
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A7J5V5N6_9BACT (Uncharacterized transposon-derived protein F54H12.3-like (Fragment) n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7J5V5N6_9BACT)

HSP 1 Score: 91.3 bits (225), Expect = 1.100e-17
Identity = 85/290 (29.31%), Postives = 135/290 (46.55%), Query Frame = 1
Query:    1 LDKLYF---DKGMKMGRDKLFYYILNNTPNMHKVKKSDIEEYLKRN---QVHVINSRQYKTKE--IKSYDAKYPLHILQMDLIDYSKKPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFM---KINFDRKPKKIVSDNGSEFL-AEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYK-KLLEGNKMTSGKTWVDYMKDMTKLYNSNVHSSTGFPPKIALKAQVNDEVFENIREKQEKRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVVK 831
            LDK+Y+   ++    G DKLF           KV +  IE YL +     +H    + +K     ++  D ++   +  M  I       +   YIL V+D+FS++ W   +  K   ++L AF    KI   RKP+KI +D G+EFL  E Q+YLK EG+ H  +  HS  +   VERFN T K K+ +        T+++ + D  K YN ++H S G  P    K +  D+++  +  +   +        R+    VG K R+   KG   K  + N++ E + VK
Sbjct:   14 LDKIYYSPDEEASYSGVDKLFRVAKEKGL---KVSRKVIENYLGKQASYSLHKPARKNFKRNATVVRGIDQQWQADLADMQSISDDNDGVK---YILTVIDIFSKYAWAIPIKNKGSKEMLNAFQLLFKIAAPRKPEKIQTDEGTEFLNKELQKYLKSEGVHHFCS--HSDKKAAVVERFNRTLKTKIWKYFTAQQTYTYINKLADFVKSYNHSIHRSIGMRPSEVTKKEE-DKIWSKLYVENSPK--------RKKANIVGSKARISKWKGVFEKGYLPNWSEEHFHVK 286          
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: A0A6L4ZJ00_9BACT (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A6L4ZJ00_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 2.000e-17
Identity = 75/255 (29.41%), Postives = 124/255 (48.63%), Query Frame = 1
Query:    1 LDKLYFDKGMKMGRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVI---NSRQYKTKEIKSYDAKYPLHILQMDLIDYSKKPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKI--NFDRKPKKIVSDNGSEFLA-EFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLL-EGNKMTSGKTWVDYMKDMTKLYNSNVHSSTGFPPKIALKAQ------VNDEVFENIREKQEKRNANKEDVNR 726
            L  +++ +G   GRDKL+   +    N   + +  + E+LK+ +++ I        KT+     D    + +   DLID+  K   +  +IL  +DLFS+  +   L  K    V++    I  N D     I SDNGSEF++ EF++ L+   IK VF+ PH+P  NG VERFNG  K+L+ +   + +   WV  ++ +   YNS+   +    P    +A       V D +++ +  K +K    KE VN+
Sbjct:   13 LYNIFYVQGFLFGRDKLYKKSVELNFN---ISRRQVAEWLKKQEINQIFRPTKLATKTQPTVLNDIHKQIGV---DLIDFRNKENEENRWILTAIDLFSKKAYAQPLPNKTNKAVVSGMKTILDNIDNDISSIRSDNGSEFISKEFKKLLQDRNIKQVFSLPHTPQSNGQVERFNGIIKRLIRQFLYINNSYDWVKNLQTLVDNYNSSYQETIKDTPNNVEEADEDKKTVVKDNIYKAVAGKLQKDIIPKEVVNK 261          
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: E4XJH8_OIKDI (Integrase catalytic domain-containing protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XJH8_OIKDI)

HSP 1 Score: 92.0 bits (227), Expect = 2.630e-17
Identity = 77/268 (28.73%), Postives = 126/268 (47.01%), Query Frame = 1
Query:   67 NNTPNMHKVKKSDIEEYLKRNQVHVINSRQYKTKEI---KSYDAKYPLHILQMDLIDYSKKPARQ--FNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKI--NFDRKPKKIVSDNGSEFL-AEFQQYLKKEGIKH--VFTNPHSPFQNGNVERFNGTYKKLLEGNKMTSGKTWVDYMKDMTKLYNSNVHSSTGFPPKIALKAQVNDEVFENIREKQEKRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVVKNIR 840
            N+T      KK  I ++L++N++H  + R   TK+I   +    KYP  I   DLIDY K       FN+IL+++D F++FVWT  L KK   K       I   F   P  +++D G EF   + ++ L++ GI H  + T   +      +        K L  N   + K+W+++++ +T  YN   HSS    PK ++      EVF ++  + +     +          +G+ VR+K+ K    K    N+T ELY + +IR
Sbjct:  302 NDTKKKKPEKKPKIADFLRQNKIHSTHRRI--TKKIFPRRHIIVKYPKQIFMADLIDYQKDSYHNKGFNWILLIIDCFTKFVWTVPLKKKDGPKCANGLNDIFQEFTEWPNSLITDEGKEFYNKDVRKILERYGIHHYSIKTKMKASIAERAIRTLKSKIHKCLVKN---NSKSWIEFLQKITAGYNGTYHSSIKMEPK-SVNESNRKEVFASLFPEIDNVVTPR--------LKIGNIVRVKINKELFEKGFTRNWTTELYKIIDIR 555          
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: UPI001EAFD334 (uncharacterized protein LOC124148213 n=5 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFD334)

HSP 1 Score: 89.0 bits (219), Expect = 1.730e-16
Identity = 69/209 (33.01%), Postives = 110/209 (52.63%), Query Frame = 1
Query:  217 DLIDYSKKPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGN-VERFNGTYKKLLEGNKMTSGKT--WVDYMKDMTKLYNSNVHSSTGFPPKIALKAQVNDEVFENIREKQE--KRNANKEDVNREAVFNVGDKVRLKVPKGKLGKHSVNNFTRELYVV 828
            D+  YSK+      Y+LV +D+ SRF +   LT K+P+ VL AF +I  +R P K+  D GSEF   F+ +L+K  I    T  H+     N VERFN T K L+    +T   T  ++D +  +   YN+ +HSS      + +K +   +V+E++  K    K+ ++K + ++  VF VGD VR+   +    K     +T+EL+ V
Sbjct:   93 DMTRYSKE-NNGVRYLLVAIDILSRFAFALPLTNKRPETVLKAFKEIIQERNPMKVRVDGGSEFKGVFKDFLEKHNI--TLTVAHNENIKSNYVERFNRTLKSLIT-RYLTHNNTKYYLDALPKLMDNYNNTLHSSLPNLSPVQVKKKNELKVWEHLYVKPLLLKKQSSKHNRSKAFVFKVGDLVRIPYLRRPFSKELDLKWTQELFKV 297          
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Match: UPI001EE5C67A (uncharacterized protein LOC124278378 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5C67A)

HSP 1 Score: 87.8 bits (216), Expect = 3.730e-16
Identity = 66/200 (33.00%), Postives = 106/200 (53.00%), Query Frame = 1
Query:  205 ILQMDLIDYSK--KPARQFNYILVVLDLFSRFVWTFALTKKQPDKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSPFQNGNVERFNGTYKKLLEGNKMTSGKT--WVDYMKDMTKLYNSNVHSSTG--FPPKIALKAQVN--DEVFENIREKQEKRNANKEDVN------REAVFNVGDKVRL 762
            +  +DL D S+  K      Y+LV +D+ SR+ +   L  K+PD VL AF +I  +RKP+K+ +D GSEF   F+++L+KE I H      +  ++  VERFN T K L+    MT   T  +V+ +  +   YN  +HSS     P ++  + QV   D V+  ++  ++K N+    +N      +  +F VGD VR+
Sbjct:   86 MFDVDLADMSRYTKFNENVRYLLVTVDILSRYAFVLPLVNKRPDTVLKAFKQIIKERKPRKVRTDAGSEFKGIFREFLEKENITHTIARNEN-IKSNYVERFNRTLKSLIT-RYMTHNNTKRYVNILPKLVYNYNHTLHSSLPELSPAQVTKENQVKVWDHVY--LKPIRKKINSTSTSMNISKPKAKRYLFKVGDLVRI 281          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1085.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Q3HFF6_9SPHI1.130e-1931.64Transposase n=1 Tax=Sphingobacteriales bacterium T... [more]
UPI001EE4FD0B4.190e-1829.17uncharacterized protein LOC124270833 isoform X1 n=... [more]
A0A816N4I7_9BILA5.550e-1830.88Hypothetical protein n=8 Tax=Rotaria TaxID=231623 ... [more]
UPI001EE572C95.810e-1834.72uncharacterized protein LOC124290564 isoform X2 n=... [more]
A0A519RGX0_FLASP6.520e-1831.64Transposase n=1 Tax=Flavobacterium sp. TaxID=239 R... [more]
A0A7J5V5N6_9BACT1.100e-1729.31Uncharacterized transposon-derived protein F54H12.... [more]
A0A6L4ZJ00_9BACT2.000e-1729.41Integrase catalytic domain-containing protein (Fra... [more]
E4XJH8_OIKDI2.630e-1728.73Integrase catalytic domain-containing protein n=1 ... [more]
UPI001EAFD3341.730e-1633.01uncharacterized protein LOC124148213 n=5 Tax=Halio... [more]
UPI001EE5C67A3.730e-1633.00uncharacterized protein LOC124278378 n=1 Tax=Halio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1085contigH-akashiwo_Contig1085:170524..171363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7070.TC014830-PA
PFAMsChromo,rve
Model size840
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.67e-16
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,39ZX7@33154|Opisthokonta,3BPF6@33208|Metazoa,3E413@33213|Bilateria,42A7E@6656|Arthropoda
DescriptionIntegrase core domain
Cds size813
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387072.6658885-UTR-H-akashiwo_Contig1085:170523..1705501681387072.6658885-UTR-H-akashiwo_Contig1085:170523..170550Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1085 170524..170550 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387072.6781347-CDS-H-akashiwo_Contig1085:170550..1713631681387072.6781347-CDS-H-akashiwo_Contig1085:170550..171363Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1085 170551..171363 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1085.3.1prot_H-akashiwo_Contig1085.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1085 170551..171363 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1085.3.1

>prot_H-akashiwo_Contig1085.3.1 ID=prot_H-akashiwo_Contig1085.3.1|Name=mRNA_H-akashiwo_Contig1085.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=271bp
MKMGRDKLFYYILNNTPNMHKVKKSDIEEYLKRNQVHVINSRQYKTKEIK
SYDAKYPLHILQMDLIDYSKKPARQFNYILVVLDLFSRFVWTFALTKKQP
DKVLAAFMKINFDRKPKKIVSDNGSEFLAEFQQYLKKEGIKHVFTNPHSP
FQNGNVERFNGTYKKLLEGNKMTSGKTWVDYMKDMTKLYNSNVHSSTGFP
PKIALKAQVNDEVFENIREKQEKRNANKEDVNREAVFNVGDKVRLKVPKG
KLGKHSVNNFTRELYVVKNIR
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mRNA from alignment at H-akashiwo_Contig1085:170524..171363+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1085.3.1 ID=mRNA_H-akashiwo_Contig1085.3.1|Name=mRNA_H-akashiwo_Contig1085.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=840bp|location=Sequence derived from alignment at H-akashiwo_Contig1085:170524..171363+ (Heterosigma akashiwo CCMP452)
TTGGATAAATTGTATTTTGACAAAGGGATGAAGATGGGTCGAGACAAATT GTTCTATTATATCTTAAATAACACACCTAACATGCATAAGGTTaAAAAAA GTGATATTGAAGAATACTTGAAACGCAACCAGGTGCATGTGATTAATTCA AGGCAGTACAAGACCAAGGAAATCAAAAGTTATGATGCTAAATATCCATT ACATATTTTGCAAATGGACTTGATTGATTACAGCAAAAAACCGGCAAGAC AGTTCAACTATATACTGGTTGTACTAGACTTGTTTTCAAGGTTTGTTTGG ACGTTTGCATTAACAAAAAAACAACCTGACAAGGTTTTAGCAGCATTTAT GAAGATAAATTTTGATAGGAAGCCAAAAAAGATAGTATCAGATAATGGTT CTGAATTTCTTGCTGAATTTCAACAATACTTGAAAAAGGAAGGTATTAAG CATGTATTTACTAATCCACATTCTCCTTTTCAGAATGGTAACGTAGAGAG GTTCAATGGGACTTATAAAAAACTACTTGAAGGTAATAAAATGACTAGTG GTAAAACGTGGGTCGATTACATGAAAGACATGACTAAACTGTATAACAGC AATGTACACTCATCAACAGGTTTTCCACCAAAAATTGCTTTGAAAGCACA GGTTAATGATGAAGTGTTTGAAAACATCAGAGAAAAACAAGAAAAAAGGA ATGCTAACAAAGAAGATGTTAATAGGGAAGCAGTTTTTAATGTTGGAGAT AAAGTAAGATTGAAAGTTCCAAAAGGTAAATTAGGTAAACATTCTGTTAA TAATTTTACACGTGAGTTGTATGTTGTTAAAAACATAAGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1085:170524..171363+

>mRNA_H-akashiwo_Contig1085.3.1 ID=mRNA_H-akashiwo_Contig1085.3.1|Name=mRNA_H-akashiwo_Contig1085.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=813bp|location=Sequence derived from alignment at H-akashiwo_Contig1085:170524..171363+ (Heterosigma akashiwo CCMP452)
ATGAAGATGGGTCGAGACAAATTGTTCTATTATATCTTAAATAACACACC
TAACATGCATAAGGTTaAAAAAAGTGATATTGAAGAATACTTGAAACGCA
ACCAGGTGCATGTGATTAATTCAAGGCAGTACAAGACCAAGGAAATCAAA
AGTTATGATGCTAAATATCCATTACATATTTTGCAAATGGACTTGATTGA
TTACAGCAAAAAACCGGCAAGACAGTTCAACTATATACTGGTTGTACTAG
ACTTGTTTTCAAGGTTTGTTTGGACGTTTGCATTAACAAAAAAACAACCT
GACAAGGTTTTAGCAGCATTTATGAAGATAAATTTTGATAGGAAGCCAAA
AAAGATAGTATCAGATAATGGTTCTGAATTTCTTGCTGAATTTCAACAAT
ACTTGAAAAAGGAAGGTATTAAGCATGTATTTACTAATCCACATTCTCCT
TTTCAGAATGGTAACGTAGAGAGGTTCAATGGGACTTATAAAAAACTACT
TGAAGGTAATAAAATGACTAGTGGTAAAACGTGGGTCGATTACATGAAAG
ACATGACTAAACTGTATAACAGCAATGTACACTCATCAACAGGTTTTCCA
CCAAAAATTGCTTTGAAAGCACAGGTTAATGATGAAGTGTTTGAAAACAT
CAGAGAAAAACAAGAAAAAAGGAATGCTAACAAAGAAGATGTTAATAGGG
AAGCAGTTTTTAATGTTGGAGATAAAGTAAGATTGAAAGTTCCAAAAGGT
AAATTAGGTAAACATTCTGTTAATAATTTTACACGTGAGTTGTATGTTGT
TAAAAACATAAGA
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