mRNA_H-akashiwo_Contig1083.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 293 bits (750), Expect = 6.960e-91 Identity = 136/150 (90.67%), Postives = 144/150 (96.00%), Query Frame = 1
Query: 1 LSKRFTSPSASCLVASYHLLRYLWWTEDKGVALGGPLRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYKQGCAPVYEDSKACISWANDETVSKSARHIHVSYHYTKEI 450
LSKRFTSPSA+CL ASYHLLRYLWWTEDKGV LGGPL LTAYADADFCSERHKGRSRSG+AIFLG SPIIWSS+MQHCVTRNTT+AEYVSLRNAVTDVMWLKRLLESL YKQGC P+YED+KACI+WANDETVSKSARHIHVSYHYTKE+
Sbjct: 807 LSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQGCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEM 956
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 146 bits (368), Expect = 8.230e-40 Identity = 72/154 (46.75%), Postives = 99/154 (64.29%), Query Frame = 1
Query: 1 LSKRFTSPSASCLVASYHLLRYLWWTEDKGVALGGPLRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYKQGC-----APVYEDSKACISWANDETVSKSARHIHVSYHYTKE 447
L + +P A RYL T+ + + LGG L L A++D+DFC++R G+S +GY +FLG +PI+WSSK+Q VT +T +AEY++LR+AV D+MWL+ LLE + GC PV ED+ AC+ WAND V+K RH HVSYH KE
Sbjct: 160 LQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEM----GCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKE 309
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: A0A1Y3N905_PIRSE (Uncharacterized protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N905_PIRSE) HSP 1 Score: 106 bits (264), Expect = 1.160e-25 Identity = 48/132 (36.36%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 55 LLRYLWWTEDKGVALGGPLRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYKQGCAPVYEDSKACISWANDETVSKSARHIHVSYHYTKEI 450
+ RYL T+ G+ + + + + DAD + RS +G+ IF+GS+P+ W SK+QHCV +T ++EY SL MWL+ LL+ L K C + D+KA I + +ET++ +RHI++ YH +E+
Sbjct: 43 IFRYLKGTKYYGIKINKNINIRVFVDADLGGDTESMRSTTGFVIFMGSAPVTWYSKLQHCVALSTAESEYYSLNECALKCMWLRNLLDELGIKIKCITINIDNKAAIYNSKNETINPKSRHINLRYHKIREL 174
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: A0A1U8MEC4_GOSHI (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8MEC4_GOSHI) HSP 1 Score: 101 bits (251), Expect = 1.990e-22 Identity = 53/151 (35.10%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 1 LSKRFTSPSASCLVASYHLLRYLWWTEDKGVAL-GGPLRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYKQGCAPV-YEDSKACISWANDETVSKSARHIHVSYHYTKE 447
LS+ +SPS + A +LRYL T D G+ L L YADAD+ S RS SGY ++LG++P+ W SK Q V+R++ +AEY SL N V++++W+++LL + Q P+ + D+ + ++ A + T +H+ + +H+ +E
Sbjct: 247 LSQYMSSPSDTHWKAIKRVLRYLAGTIDYGLCFTASSLDLVCYADADWASSVDDRRSTSGYVVYLGANPVAWCSKKQSMVSRSSAEAEYRSLANCVSELLWIQQLLNEVGIPQSKIPIIWCDNSSAVAVAENPTHHAKMKHVEIDHHFVRE 397
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: A0A1U8MGS6_GOSHI (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8MGS6_GOSHI) HSP 1 Score: 95.9 bits (237), Expect = 2.740e-22 Identity = 50/133 (37.59%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 55 LLRYLWWTEDKGVALG-GPLRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYKQGCAPV-YEDSKACISWANDETVSKSARHIHVSYHYTKE 447
+LRYL T D G+ L L+L Y+DAD+ S RS SGY +FLGS+P+ W SK Q V+R++ +AEY SL N V++++WL++LL + PV + D+ + +S A + T +H+ + +H+ ++
Sbjct: 15 VLRYLAGTIDHGLFLTPSQLKLVCYSDADWVSSIEDRRSTSGYVVFLGSNPVAWCSKKQPVVSRSSAEAEYRSLANCVSELLWLQQLLAEIGIFPSKVPVVWCDNSSAVSVAENPTHHARIKHVEIDHHFVRK 147
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: A0A8J5ZI29_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZI29_9ROSI) HSP 1 Score: 101 bits (251), Expect = 4.520e-22 Identity = 56/152 (36.84%), Postives = 90/152 (59.21%), Query Frame = 1
Query: 1 LSKRFTSPSASCLVASYHLLRYLWWTEDKGVALG-GPLRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYKQGCAP--VYEDSKACISWANDETVSKSARHIHVSYHYTKE 447
LS+ SPS S A +LRYL T D G+ L G L Y+DAD+ S RS +GY ++LG++P+ W SK Q V+R++++AEY SL N V++++W+K LL+ L C P ++ D+ + +S A + T +H+ + +H+ +E
Sbjct: 394 LSQYMNSPSESHWKAVKRVLRYLIGTLDHGLYLSKGQFALVYYSDADWASSVEDRRSTTGYVVYLGANPVAWCSKKQPVVSRSSSEAEYRSLDNCVSELLWVKWLLDELSMPL-CQPPVIWCDNASTVSMAANPTHHARVKHVEIDHHFVRE 544
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: A0A1U8MG77_GOSHI (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8MG77_GOSHI) HSP 1 Score: 100 bits (248), Expect = 4.900e-22 Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = 1
Query: 1 LSKRFTSPSASCLVASYHLLRYLWWTEDKGVALG-GPLRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYKQGCAPV-YEDSKACISWANDETVSKSARHIHVSYHYTKEIFL 456
LS+ +P + A +LRYL T D G+ L L+L Y+DAD+ S RS SGY +FLGS+P+ W SK Q V+R++ +AEY SL N V++++WL++LL + PV + D+ + +S A + T +H+ + +H+ +E L
Sbjct: 193 LSQFMNAPREAHWRALKRVLRYLAGTIDHGLFLTPSQLKLVCYSDADWASSIEDRRSTSGYVVFLGSNPVAWCSKKQPVVSRSSAEAEYRSLANCVSELLWLQQLLAEIGIFPSKVPVVWCDNSSAVSVAENPTHHARMKHVEIDHHFVREKIL 346
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: A0A8J5Z3G0_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z3G0_9ROSI) HSP 1 Score: 101 bits (251), Expect = 5.180e-22 Identity = 55/151 (36.42%), Postives = 88/151 (58.28%), Query Frame = 1
Query: 1 LSKRFTSPSASCLVASYHLLRYLWWTEDKGVALG-GPLRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYKQGCAPV-YEDSKACISWANDETVSKSARHIHVSYHYTKE 447
LS+ SPS A +LRYL T D G+ L G L Y+DAD+ S R +GY +FLG++P+ W SK Q V+R++++AEY SL N V++++W+K+LL+ L PV + D+ + +S A + T +H+ + +H+ +E
Sbjct: 523 LSQYMNSPSELHWKAIKRVLRYLLGTIDHGLYLSKGQFALVCYSDADWASSVEDRRFTTGYVVFLGANPVAWCSKKQPVVSRSSSEAEYRSLANYVSELLWVKQLLDELGLSLSQPPVVWCDNTSAVSMAANPTHHAKVKHVEIDHHFVRE 673
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: UPI001C9BC1AB (secreted RxLR effector protein 161-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BC1AB) HSP 1 Score: 97.4 bits (241), Expect = 6.530e-22 Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 1
Query: 1 LSKRFTSPSASCLVASYHLLRYLWWTEDKGVALGGP-LRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYK-QGCAPVYEDSKACISWANDETVSKSARHIHVSYHYTKE 447
+S+ +P A +LRY+ T+ G+ G + TAY+DADF + RS +GY + P+IWSS Q C++R+TT+AEYV+ +A +V WL+ LL+ L + P++ D+++ I + K +HI + YHY +E
Sbjct: 62 VSRFLNNPGKEHWKAVKRILRYIQGTKYMGIKYSGSHIDFTAYSDADFAGDVDTRRSTTGYITLMAGGPVIWSSHRQKCISRSTTEAEYVAASDASQEVTWLRILLQELCVDLKNPTPLHMDNQSAIRLTKNTEHHKKTKHIDIKYHYIRE 212
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Match: A0A1U8IYX5_GOSHI (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8IYX5_GOSHI) HSP 1 Score: 98.2 bits (243), Expect = 7.640e-22 Identity = 50/153 (32.68%), Postives = 89/153 (58.17%), Query Frame = 1
Query: 1 LSKRFTSPSASCLVASYHLLRYLWWTEDKGVALG-GPLRLTAYADADFCSERHKGRSRSGYAIFLGSSPIIWSSKMQHCVTRNTTQAEYVSLRNAVTDVMWLKRLLESLEYKQGCAPVYEDSKACISWANDETVSKSARHIHVSYHYTKEIFL 456
LS+ PS + A +LRYL T D G+ G + Y+DAD+ S RS +GY ++LG +P+ WSSK Q V+R++++AEY SL N V++++W+K+L++ + Q V+ D+ + ++ A + T +H+ + +H+ ++ L
Sbjct: 91 LSQYMNCPSETHWRAVKRVLRYLIGTSDHGLFFTKGNAAVVGYSDADWASSVEDRRSTTGYVVYLGPNPVAWSSKKQSMVSRSSSEAEYRSLANCVSELLWVKQLVDEIGLSQSIPVVWCDNTSTVAIAANPTHHARMKHVEIDHHFIRKKIL 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1083.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1083.3.1 >prot_H-akashiwo_Contig1083.3.1 ID=prot_H-akashiwo_Contig1083.3.1|Name=mRNA_H-akashiwo_Contig1083.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=152bp LSKRFTSPSASCLVASYHLLRYLWWTEDKGVALGGPLRLTAYADADFCSEback to top mRNA from alignment at H-akashiwo_Contig1083:331973..332428+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1083.3.1 ID=mRNA_H-akashiwo_Contig1083.3.1|Name=mRNA_H-akashiwo_Contig1083.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=456bp|location=Sequence derived from alignment at H-akashiwo_Contig1083:331973..332428+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1083:331973..332428+ >mRNA_H-akashiwo_Contig1083.3.1 ID=mRNA_H-akashiwo_Contig1083.3.1|Name=mRNA_H-akashiwo_Contig1083.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=456bp|location=Sequence derived from alignment at H-akashiwo_Contig1083:331973..332428+ (Heterosigma akashiwo CCMP452)back to top |