mRNA_H-akashiwo_Contig108.22.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig108.22.1
Unique NamemRNA_H-akashiwo_Contig108.22.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S4JXT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXT9_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.580e-109
Identity = 161/271 (59.41%), Postives = 208/271 (76.75%), Query Frame = 1
Query:    1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEKKGGNLGGQEKSYERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMR-GQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGG 810
            LP + GKTVV+TG S+GLGY+TA+S AKKGA VI L+R+S R++Q L ++   A +G   P F EC+LLDFSSVR+AA  ++    GR IDVLC NAG+M+QPD+ASKDGYD+T+STN+ SHFLL +EL+P LE  A+  GE+R++NMSSGSG GPP  +  FF ++GGNLGG + SY RYHQSKLANL FT ALH++L+  KS +K+LAC PGVCATDM+ H  ++M+ G P  +  VPSVED SLAQLKC+ DPTV+SG+ ++P   GG
Sbjct:   23 LPSMDGKTVVITGTSRGLGYVTAMSLAKKGARVISLNRRSERSEQCLSELAREA-TGDELPQFVECNLLDFSSVREAASTLRDMTGGR-IDVLCCNAGIMMQPDEASKDGYDITISTNVFSHFLLVKELLPILEDTAAQHGEARVVNMSSGSGFGPPEFDSRFFTRQGGNLGGAKDSYARYHQSKLANLAFTVALHEKLQSMKSYVKSLACTPGVCATDMYAHVQSLMKPGTPVDMSKVPSVEDESLAQLKCICDPTVRSGQLFSPPGIGG 291          
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S0EDR9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EDR9_9EUKA)

HSP 1 Score: 322 bits (824), Expect = 1.210e-106
Identity = 172/272 (63.24%), Postives = 209/272 (76.84%), Query Frame = 1
Query:    1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEKKGGNLGGQEKS-YERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMRGQPPA-LDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGG 810
            LP ++GKTVVVTGAS+GLGY+TALS A+KGA+V L+ R S RAD AL D   +A++G  P +  ECDLLDF SVRKAA  ++ S AG  IDVLC NAG+M+QPD+ASKDGYDVT++TN++SHFLL REL+P LE AA   GE+RI++MSSGSG G P L+PA +E++GG LGG  +  YERYHQSKL NLVFT+AL DRL+ R S++KALAC PGVCATDMFVH  T+        L +VPS EDGSLAQLKC+ DP VQSGE + P   GG
Sbjct:   35 LPSMAGKTVVVTGASRGLGYVTALSVARKGAAVFLVGRSSARADAAL-DAIRSASTGPAPQLV-ECDLLDFGSVRKAAAALRES-AGE-IDVLCCNAGIMMQPDEASKDGYDVTIATNVLSHFLLARELLPTLEAAAERSGEARIVSMSSGSGFGAPGLDPAVYEQRGGRLGGGPRGMYERYHQSKLGNLVFTAALDDRLRRRDSRVKALACTPGVCATDMFVHVQTLSNPNAVVDLAAVPSPEDGSLAQLKCICDPAVQSGELYGPPGLGG 302          
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S4VH56_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VH56_9STRA)

HSP 1 Score: 304 bits (778), Expect = 6.740e-100
Identity = 158/281 (56.23%), Postives = 198/281 (70.46%), Query Frame = 1
Query:    1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEKKGGNLG-GQEKSYERYHQSKLANLVFTSALHDRLKE-RKSQIKALACAPGVCATDMFVHACTVMRGQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGGGLMRIDMNP 837
            LP L GKT+ +TG S+GLG++TA++  KKG   ILL+RK+           +  A+G +P +  ECDLL F SVR+A Q V+      GIDVLC NAG+MLQP++AS DGYDVT STN++SHFLLT+EL  +LE A+   G +RI+ MSS SG G P L+P FF+++GGNLG   + SY RYHQ+KLANL F SAL DRL+    ++I+A+AC PGVC TDMFVHA TVM G+P     VPSVEDGSLAQLKC+FDPTVQSG+ W P  R G L +  M P
Sbjct:   15 LPSLEGKTIAITGCSRGLGHVTAMAVVKKGGRAILLNRKASSKSPEWYHQLQNEATGPKP-INIECDLLSFESVRQACQRVREETQDTGIDVLCCNAGIMLQPNKASVDGYDVTASTNMLSHFLLTKELFGQLEHASKNNGLARIVIMSSASGYGGPALDPTFFQRRGGNLGESTQASYARYHQTKLANLAFCSALKDRLESSNNNRIQAVACTPGVCGTDMFVHATTVMNGRPAPRSMVPSVEDGSLAQLKCIFDPTVQSGDLWGPG-RDGKLEKTMMQP 293          
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: R1BBY0_EMIHU (Short chain dehydrogenase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BBY0_EMIHU)

HSP 1 Score: 302 bits (773), Expect = 1.130e-99
Identity = 154/284 (54.23%), Postives = 204/284 (71.83%), Query Frame = 1
Query:    1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDIT-EAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGI--DVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEK-KGGNLGGQEKSYERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMR-GQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGGGLMRIDMNP 837
            LP +SG+TV +TG S+GLGY+TAL+ AKKGA + LL+R S  + +AL+++T E  A+G+  P    CDLLDFSSVR AA  +   +A  G+  DVLC NAG+ML PD+ SKDGYD+T++TN++SHFLL REL+P LE AAS  G++R+++MSSGSG+GPP  + A+F    GG LGG   +  RYHQSKLANL+FTSAL ++L+ R S+++ALAC PGVC TDM+ H   V   G+P    +V SVEDG L QLKCV DP+V+SGE W P    G  +R+ + P
Sbjct:    1 LPSMSGRTVAITGCSRGLGYVTALTLAKKGAQLFLLNRDSEASARALVELTAECTAAGSPMPQQIACDLLDFSSVRAAADKLSSQLAAEGLRLDVLCCNAGIMLMPDEPSKDGYDITIATNVLSHFLLARELLPALEAAASATGDARVVSMSSGSGMGPPGFDAAYFAAGSGGALGGPTGANARYHQSKLANLLFTSALDEKLRARGSRVRALACTPGVCGTDMYEHVQGVFNPGKPVDFGAVASVEDGCLGQLKCVCDPSVESGECWGPNGYSGPPVRLVIAP 284          
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S1VDS2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VDS2_9STRA)

HSP 1 Score: 299 bits (766), Expect = 2.140e-97
Identity = 158/279 (56.63%), Postives = 194/279 (69.53%), Query Frame = 1
Query:    1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAAS----------GARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEKKGGNLGGQEKSYERYHQSKLANLVFTSALHDRLKER--KSQIKALACAPGVCATDMFVHACTVMRGQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQM 801
            LP L G+TVVVTG S+GLGY TA S  KKG S+I+L+RKS+R+ + L ++TE AA+           A  P   ECDLLDFSSVRKA   ++       + VLCNNAG+MLQPD+ S DGYD+T STN++SHFL+T+EL P L K AS     RI+NMSS SG G P L+P FF+++GGNLGG   S  RY QSKLANLVFT AL DRL++   K  + ALAC PG+C TDMFVHA TVM GQP   D VPS EDG++AQL C+F   VQSG+ W P++
Sbjct:   55 LPSLEGRTVVVTGCSRGLGYATASSVVKKGGSLIMLNRKSKRSTEVLAELTEIAATTNRESSSSSHAALAPRLVECDLLDFSSVRKACAQIRADTDE--LHVLCNNAGIMLQPDEPSVDGYDITASTNVLSHFLITKELFPLL-KRASAASSPRIVNMSSLSGYGGP-LDPRFFQRRGGNLGGSRASMNRYSQSKLANLVFTVALDDRLRQDNDKDHVLALACTPGLCGTDMFVHATTVMTGQPAPRDRVPSAEDGAMAQLHCIFSSDVQSGDLWGPKL 329          
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A812HPQ7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812HPQ7_9DINO)

HSP 1 Score: 223 bits (568), Expect = 6.170e-68
Identity = 134/296 (45.27%), Postives = 178/296 (60.14%), Query Frame = 1
Query:    1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPP-LNPAFFEKKGGNLGGQEKS-------YERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMRGQPPALDSV------PSVEDGSLAQLKCVFDPTVQSGEFWNPQMRG---GGLMRIDMNP 837
            LP L GK V VTG + G G+I A +AAKKGA V++L+R+S R++ A   + E A       +   CDL  F SV++AA  +K   A +GIDVLCNNAGVM   D+A+KDGYDV M TN +SHFLLT+EL P LEKAA  RG++RI+N SSG+   P   L+  +  K GG+LGG   S       ++RYHQ+KLAN VFT AL +RL+ + S++KAL  APG+ AT++      V   Q    +         S EDG++  L+C     VQSGEF+ P       G   +ID+ P
Sbjct:   26 LPSLEGKVVCVTGCTTGTGFIAARTAAKKGAHVVMLNRQSARSEAAEKSLLEVAPGSNVTSV--ACDLQSFDSVKEAASKLKSMFADKGIDVLCNNAGVMALADEATKDGYDVQMQTNHLSHFLLTKELYPLLEKAAQQRGDARIVNHSSGARKFPSKDLDADYLGKNGGSLGGNGNSMFFGGARWQRYHQTKLANAVFTLALDERLRAKSSKVKALCAAPGLAATNL-----QVTTNQADGFNDTWMMRFAQSGEDGTMPLLQCCVGEGVQSGEFYEPDGMAAMKGKPAKIDLEP 314          
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A1Q9DMU3_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DMU3_SYMMI)

HSP 1 Score: 223 bits (567), Expect = 7.550e-68
Identity = 123/277 (44.40%), Postives = 169/277 (61.01%), Query Frame = 1
Query:    1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSG-SGLGPPPLNPAFFEKKGGNLGGQEKSY-----------ERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMRGQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNP 795
            LP + GK V +TG + G G + A + A+ GA VI+L+R S+RAD AL D+    +       F ECDL+ F+SVRKAA  +    A +G+DVLCNNAGV  QPDQA+ DGYD  M TN +SHFLLT+++ P L KAA +RGESR++N SSG       P +  ++ K GG LGG ++S+           ERY  SKLANL+FT AL DR++++  ++KAL   PG  AT +  ++  +            S EDG+L  L+C  DP  QSG+F++P
Sbjct:   20 LPPMQGKVVAITGCTSGTGLVFARTLAQAGAEVIMLNRSSKRADDALKDVQALTSQ----VTFIECDLMSFASVRKAAIELNQRFASKGLDVLCNNAGVSTQPDQATVDGYDPQMQTNHLSHFLLTQQVWPLLLKAADLRGESRVVNHSSGYRHAHKQPFDVKYYGKNGGQLGGDDESFMETITFHPPGLERYCHSKLANLIFTYALDDRIRQKGLKVKALCANPGFTATRLVANSDRLRSWSDFMARLAQSEEDGTLGILRCACDPLAQSGDFFSP 292          
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S0MNX3_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MNX3_9CRYP)

HSP 1 Score: 223 bits (567), Expect = 8.240e-68
Identity = 130/283 (45.94%), Postives = 180/283 (63.60%), Query Frame = 1
Query:    1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPP-PLNPAFFEKKGGNLGGQEKS-------YERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTV--MRGQPPA---LDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGG 810
            LP + GK V++TG + G G+I A + AKKGA V++L+R+S R++ AL  + +   +     +  +CDL+D SSV+KAA  VK      GIDVLCNNAG+M   D+A+KDGYD  M TN +SHFLLT+EL+  L KAA+ +GE+R++N SSG+   P  PL   +  K GGNLGG   S       ++RYHQ+KLAN VFT ALHDRL+   S++K+L  APG+ AT++ V   +   M G   A   +    S EDG++  L+C+  P  QSG+F+ P  RGG
Sbjct:   24 LPSMQGKNVLITGCTSGTGFIAARAMAKKGAHVVMLNRRSDRSEAALKTLKDEFKNAKITGI--DCDLMDLSSVQKAADAVKQQFP-EGIDVLCNNAGIMADEDKATKDGYDTQMQTNHLSHFLLTKELITLLNKAANSKGEARVVNHSSGARSFPSSPLQAKYLGKNGGNLGGNGSSMLFGGARWQRYHQTKLANAVFTMALHDRLQAAGSRVKSLCAAPGLAATNLQVTTNSTGGMGGSWIASFLMRFSQSAEDGTMPLLRCIAAPDAQSGDFYEP--RGG 301          
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A0G4IF92_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IF92_9ALVE)

HSP 1 Score: 217 bits (553), Expect = 1.280e-65
Identity = 134/277 (48.38%), Postives = 170/277 (61.37%), Query Frame = 1
Query:   10 LSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDIT-EAAASGARPPMF-FECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPP-PLNPAFFEKKGGNLGGQEKS-----YERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMRGQPPALDS--VPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGG 810
            L GK V VTG + G G I AL AA++GA V+LL+R S RAD    ++  EA ASG    +    CDL  F+SV+KA + VK  V    + VLCNNAGVM   D+A++DG+DV M TN +SHFLLTRELMP LE+AA+  GE+R++N SS +   PP PL   + EK GGNLGG  +S     + RY Q+KLAN VFT ALHDRL + KSQ+KA+   PGV +T++   +          L S    S EDG+   L   F+P VQSG FW P    G
Sbjct:   29 LYGKCVAVTGCTSGTGRIFALEAARRGAHVLLLNRPSERADAVYAEVVKEAGASGGAGKVTKVACDLGSFASVQKACETVKREVPK--LHVLCNNAGVMALQDKATEDGHDVQMQTNHLSHFLLTRELMPLLERAAATDGEARVVNHSSIARKSPPGPLERKYLEKNGGNLGGDSQSLSGARWVRYQQTKLANCVFTYALHDRLVKAKSQVKAVVAHPGVSSTNLLTTSFHHGGFMIARLFSFFAQSAEDGTQGILAAAFEPGVQSGTFWGPHGMNG 303          
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A813BD46_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813BD46_9DINO)

HSP 1 Score: 215 bits (547), Expect = 9.880e-65
Identity = 129/299 (43.14%), Postives = 176/299 (58.86%), Query Frame = 1
Query:    1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAA-ASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPP-----LNPAFFEKKGGNLGGQEK------SYERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATD-----MFVHACTVMRGQPPALDSV------PSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGGGLMRID 828
            LP ++GK V VTG + G G I A   A+KGA ++LL+R+S RA QAL DI+EAA A+GA  P    CDL+ F SVR A + ++  +   G+DVLCNNAG+M   D+A++DG D+ M TN +SHFLLT   MP L+KAAS+RGE+R++N SS + +   P     L   + +K GGNLGG  +      ++ RY Q+KLAN+ FT ALH RL+E  S++KAL   PGV  T      M       +   P    S+       S EDG++  L+   DP   SG+F+ P  +GG     D
Sbjct:   18 LPSMAGKVVAVTGCTSGTGKIFAQVCAEKGAKLVLLNRESERATQALKDISEAAKAAGAPEPSGIPCDLMSFKSVRAAGEKLQAELRESGLDVLCNNAGIMGFGDKATEDGCDIQMQTNHLSHFLLTYLCMPLLDKAASLRGEARVVNHSSCARVMTGPEFTNKLEEKYMQKNGGNLGGDSEEIMRGANFVRYQQTKLANVAFTYALHKRLQEAGSKVKALVAHPGVAPTQLAQGTMKAGGANDLARYPKWASSIFFKLMYQSEEDGAVGILRNSCDPAANSGDFFGPLGKGGATGAFD 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4JXT9_9STRA1.580e-10959.41Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S0EDR9_9EUKA1.210e-10663.24Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S4VH56_9STRA6.740e-10056.23Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
R1BBY0_EMIHU1.130e-9954.23Short chain dehydrogenase (Fragment) n=1 Tax=Emili... [more]
A0A7S1VDS2_9STRA2.140e-9756.63Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A812HPQ7_9DINO6.170e-6845.27Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A1Q9DMU3_SYMMI7.550e-6844.40Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]
A0A7S0MNX3_9CRYP8.240e-6845.94Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A0G4IF92_9ALVE1.280e-6548.38Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A813BD46_9DINO9.880e-6543.14Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig108contigH-akashiwo_Contig108:1487634..1488470 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2903.EOD07253
PFAMsadh_short
Model size837
Max annot lvl2759|Eukaryota
KEGG rclassRC00649
KEGG koko:K11153
KEGG ReactionR08379,R08383
KEGG Pathwayko00830,ko01100,map00830,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.86e-100
EggNOG OGsCOG1028@1|root,KOG1208@2759|Eukaryota
EC1.1.1.300
Descriptionoxidation-reduction process
Cds size837
COG categoryIQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387070.9080527-CDS-H-akashiwo_Contig108:1487633..14884701681387070.9080527-CDS-H-akashiwo_Contig108:1487633..1488470Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig108 1487634..1488470 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig108.22.1prot_H-akashiwo_Contig108.22.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig108 1487634..1488470 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig108.22.1

>prot_H-akashiwo_Contig108.22.1 ID=prot_H-akashiwo_Contig108.22.1|Name=mRNA_H-akashiwo_Contig108.22.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=279bp
LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDI
TEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVM
LQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSS
GSGLGPPPLNPAFFEKKGGNLGGQEKSYERYHQSKLANLVFTSALHDRLK
ERKSQIKALACAPGVCATDMFVHACTVMRGQPPALDSVPSVEDGSLAQLK
CVFDPTVQSGEFWNPQMRGGGLMRIDMNP
back to top

mRNA from alignment at H-akashiwo_Contig108:1487634..1488470-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig108.22.1 ID=mRNA_H-akashiwo_Contig108.22.1|Name=mRNA_H-akashiwo_Contig108.22.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=837bp|location=Sequence derived from alignment at H-akashiwo_Contig108:1487634..1488470- (Heterosigma akashiwo CCMP452)
CTGCCTCACTTGTCTGGCAAGACAGTGGTTGTCACTGGGGCGTCCAAAGG TCTTGGATACATCACTGCACTTTCCGCTGCCAAAAAGGGGGCGTCTGTAA TCCTGCTCAGTCGAAAGTCGCGAAGAGCAGACCAAGCATTGATTGATATT ACAGAGGCAGCGGCTAGCGGCGCTCGTCCTCCAATGTTTTTTGAATGTGA TTTATTGGACTTTTCAAGCGTTCGTAAAGCTGCGCAAAATGTCAAGTGCA GCGTTGCTGGCCGTGGGATTGATGTACTGTGCAATAATGCGGGAGTAATG CTACAGCCAGATCAAGCAAGCAAGGACGGGTATGATGTTACCATGTCAAC AAATATTATATCCCACTTTTTGTTGACTCGAGAATTGATGCCAGAGCTCG AGAAGGCAGCATCGATGCGAGGTGAATCTAGAATCATCAATATGTCAAGT GGCAGTGGACTTGGTCCACCACCATTGAACCCAGCCTTTTTTGAAAAAAA GGGCGGGAACTTGGGTGGACAAGAAAAAAGTTATGAACGGTACCATCAGA GCAAGCTGGCAAATTTGGTGTTCACCTCAGCATTACACGACAGATTGAAG GAAAGAAAAAGTCAGATCAAGGCTCTTGCCTGCGCACCGGGTGTGTGCGC CACAGATATGTTCGTCCATGCATGTACAGTAATGCGTGGTCAGCCTCCTG CACTAGACAGTGTTCCATCTGTGGAAGATGGATCTTTGGCTCAACTGAAG TGTGTCTTTGACCCTACTGTCCAGTCTGGTGAGTTTTGGAACCCTCAAAT GAGAGGTGGGGGTCTCATGAGAATAGACATGAACCCT
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig108:1487634..1488470-

>mRNA_H-akashiwo_Contig108.22.1 ID=mRNA_H-akashiwo_Contig108.22.1|Name=mRNA_H-akashiwo_Contig108.22.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=837bp|location=Sequence derived from alignment at H-akashiwo_Contig108:1487634..1488470- (Heterosigma akashiwo CCMP452)
CTGCCTCACTTGTCTGGCAAGACAGTGGTTGTCACTGGGGCGTCCAAAGG
TCTTGGATACATCACTGCACTTTCCGCTGCCAAAAAGGGGGCGTCTGTAA
TCCTGCTCAGTCGAAAGTCGCGAAGAGCAGACCAAGCATTGATTGATATT
ACAGAGGCAGCGGCTAGCGGCGCTCGTCCTCCAATGTTTTTTGAATGTGA
TTTATTGGACTTTTCAAGCGTTCGTAAAGCTGCGCAAAATGTCAAGTGCA
GCGTTGCTGGCCGTGGGATTGATGTACTGTGCAATAATGCGGGAGTAATG
CTACAGCCAGATCAAGCAAGCAAGGACGGGTATGATGTTACCATGTCAAC
AAATATTATATCCCACTTTTTGTTGACTCGAGAATTGATGCCAGAGCTCG
AGAAGGCAGCATCGATGCGAGGTGAATCTAGAATCATCAATATGTCAAGT
GGCAGTGGACTTGGTCCACCACCATTGAACCCAGCCTTTTTTGAAAAAAA
GGGCGGGAACTTGGGTGGACAAGAAAAAAGTTATGAACGGTACCATCAGA
GCAAGCTGGCAAATTTGGTGTTCACCTCAGCATTACACGACAGATTGAAG
GAAAGAAAAAGTCAGATCAAGGCTCTTGCCTGCGCACCGGGTGTGTGCGC
CACAGATATGTTCGTCCATGCATGTACAGTAATGCGTGGTCAGCCTCCTG
CACTAGACAGTGTTCCATCTGTGGAAGATGGATCTTTGGCTCAACTGAAG
TGTGTCTTTGACCCTACTGTCCAGTCTGGTGAGTTTTGGAACCCTCAAAT
GAGAGGTGGGGGTCTCATGAGAATAGACATGAACCCT
back to top