mRNA_H-akashiwo_Contig108.22.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S4JXT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXT9_9STRA) HSP 1 Score: 327 bits (839), Expect = 1.580e-109 Identity = 161/271 (59.41%), Postives = 208/271 (76.75%), Query Frame = 1
Query: 1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEKKGGNLGGQEKSYERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMR-GQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGG 810
LP + GKTVV+TG S+GLGY+TA+S AKKGA VI L+R+S R++Q L ++ A +G P F EC+LLDFSSVR+AA ++ GR IDVLC NAG+M+QPD+ASKDGYD+T+STN+ SHFLL +EL+P LE A+ GE+R++NMSSGSG GPP + FF ++GGNLGG + SY RYHQSKLANL FT ALH++L+ KS +K+LAC PGVCATDM+ H ++M+ G P + VPSVED SLAQLKC+ DPTV+SG+ ++P GG
Sbjct: 23 LPSMDGKTVVITGTSRGLGYVTAMSLAKKGARVISLNRRSERSEQCLSELAREA-TGDELPQFVECNLLDFSSVREAASTLRDMTGGR-IDVLCCNAGIMMQPDEASKDGYDITISTNVFSHFLLVKELLPILEDTAAQHGEARVVNMSSGSGFGPPEFDSRFFTRQGGNLGGAKDSYARYHQSKLANLAFTVALHEKLQSMKSYVKSLACTPGVCATDMYAHVQSLMKPGTPVDMSKVPSVEDESLAQLKCICDPTVRSGQLFSPPGIGG 291
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S0EDR9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EDR9_9EUKA) HSP 1 Score: 322 bits (824), Expect = 1.210e-106 Identity = 172/272 (63.24%), Postives = 209/272 (76.84%), Query Frame = 1
Query: 1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEKKGGNLGGQEKS-YERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMRGQPPA-LDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGG 810
LP ++GKTVVVTGAS+GLGY+TALS A+KGA+V L+ R S RAD AL D +A++G P + ECDLLDF SVRKAA ++ S AG IDVLC NAG+M+QPD+ASKDGYDVT++TN++SHFLL REL+P LE AA GE+RI++MSSGSG G P L+PA +E++GG LGG + YERYHQSKL NLVFT+AL DRL+ R S++KALAC PGVCATDMFVH T+ L +VPS EDGSLAQLKC+ DP VQSGE + P GG
Sbjct: 35 LPSMAGKTVVVTGASRGLGYVTALSVARKGAAVFLVGRSSARADAAL-DAIRSASTGPAPQLV-ECDLLDFGSVRKAAAALRES-AGE-IDVLCCNAGIMMQPDEASKDGYDVTIATNVLSHFLLARELLPTLEAAAERSGEARIVSMSSGSGFGAPGLDPAVYEQRGGRLGGGPRGMYERYHQSKLGNLVFTAALDDRLRRRDSRVKALACTPGVCATDMFVHVQTLSNPNAVVDLAAVPSPEDGSLAQLKCICDPAVQSGELYGPPGLGG 302
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S4VH56_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VH56_9STRA) HSP 1 Score: 304 bits (778), Expect = 6.740e-100 Identity = 158/281 (56.23%), Postives = 198/281 (70.46%), Query Frame = 1
Query: 1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEKKGGNLG-GQEKSYERYHQSKLANLVFTSALHDRLKE-RKSQIKALACAPGVCATDMFVHACTVMRGQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGGGLMRIDMNP 837
LP L GKT+ +TG S+GLG++TA++ KKG ILL+RK+ + A+G +P + ECDLL F SVR+A Q V+ GIDVLC NAG+MLQP++AS DGYDVT STN++SHFLLT+EL +LE A+ G +RI+ MSS SG G P L+P FF+++GGNLG + SY RYHQ+KLANL F SAL DRL+ ++I+A+AC PGVC TDMFVHA TVM G+P VPSVEDGSLAQLKC+FDPTVQSG+ W P R G L + M P
Sbjct: 15 LPSLEGKTIAITGCSRGLGHVTAMAVVKKGGRAILLNRKASSKSPEWYHQLQNEATGPKP-INIECDLLSFESVRQACQRVREETQDTGIDVLCCNAGIMLQPNKASVDGYDVTASTNMLSHFLLTKELFGQLEHASKNNGLARIVIMSSASGYGGPALDPTFFQRRGGNLGESTQASYARYHQTKLANLAFCSALKDRLESSNNNRIQAVACTPGVCGTDMFVHATTVMNGRPAPRSMVPSVEDGSLAQLKCIFDPTVQSGDLWGPG-RDGKLEKTMMQP 293
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: R1BBY0_EMIHU (Short chain dehydrogenase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BBY0_EMIHU) HSP 1 Score: 302 bits (773), Expect = 1.130e-99 Identity = 154/284 (54.23%), Postives = 204/284 (71.83%), Query Frame = 1
Query: 1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDIT-EAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGI--DVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEK-KGGNLGGQEKSYERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMR-GQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGGGLMRIDMNP 837
LP +SG+TV +TG S+GLGY+TAL+ AKKGA + LL+R S + +AL+++T E A+G+ P CDLLDFSSVR AA + +A G+ DVLC NAG+ML PD+ SKDGYD+T++TN++SHFLL REL+P LE AAS G++R+++MSSGSG+GPP + A+F GG LGG + RYHQSKLANL+FTSAL ++L+ R S+++ALAC PGVC TDM+ H V G+P +V SVEDG L QLKCV DP+V+SGE W P G +R+ + P
Sbjct: 1 LPSMSGRTVAITGCSRGLGYVTALTLAKKGAQLFLLNRDSEASARALVELTAECTAAGSPMPQQIACDLLDFSSVRAAADKLSSQLAAEGLRLDVLCCNAGIMLMPDEPSKDGYDITIATNVLSHFLLARELLPALEAAASATGDARVVSMSSGSGMGPPGFDAAYFAAGSGGALGGPTGANARYHQSKLANLLFTSALDEKLRARGSRVRALACTPGVCGTDMYEHVQGVFNPGKPVDFGAVASVEDGCLGQLKCVCDPSVESGECWGPNGYSGPPVRLVIAP 284
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S1VDS2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VDS2_9STRA) HSP 1 Score: 299 bits (766), Expect = 2.140e-97 Identity = 158/279 (56.63%), Postives = 194/279 (69.53%), Query Frame = 1
Query: 1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAAS----------GARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPPLNPAFFEKKGGNLGGQEKSYERYHQSKLANLVFTSALHDRLKER--KSQIKALACAPGVCATDMFVHACTVMRGQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQM 801
LP L G+TVVVTG S+GLGY TA S KKG S+I+L+RKS+R+ + L ++TE AA+ A P ECDLLDFSSVRKA ++ + VLCNNAG+MLQPD+ S DGYD+T STN++SHFL+T+EL P L K AS RI+NMSS SG G P L+P FF+++GGNLGG S RY QSKLANLVFT AL DRL++ K + ALAC PG+C TDMFVHA TVM GQP D VPS EDG++AQL C+F VQSG+ W P++
Sbjct: 55 LPSLEGRTVVVTGCSRGLGYATASSVVKKGGSLIMLNRKSKRSTEVLAELTEIAATTNRESSSSSHAALAPRLVECDLLDFSSVRKACAQIRADTDE--LHVLCNNAGIMLQPDEPSVDGYDITASTNVLSHFLITKELFPLL-KRASAASSPRIVNMSSLSGYGGP-LDPRFFQRRGGNLGGSRASMNRYSQSKLANLVFTVALDDRLRQDNDKDHVLALACTPGLCGTDMFVHATTVMTGQPAPRDRVPSAEDGAMAQLHCIFSSDVQSGDLWGPKL 329
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A812HPQ7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812HPQ7_9DINO) HSP 1 Score: 223 bits (568), Expect = 6.170e-68 Identity = 134/296 (45.27%), Postives = 178/296 (60.14%), Query Frame = 1
Query: 1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPP-LNPAFFEKKGGNLGGQEKS-------YERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMRGQPPALDSV------PSVEDGSLAQLKCVFDPTVQSGEFWNPQMRG---GGLMRIDMNP 837
LP L GK V VTG + G G+I A +AAKKGA V++L+R+S R++ A + E A + CDL F SV++AA +K A +GIDVLCNNAGVM D+A+KDGYDV M TN +SHFLLT+EL P LEKAA RG++RI+N SSG+ P L+ + K GG+LGG S ++RYHQ+KLAN VFT AL +RL+ + S++KAL APG+ AT++ V Q + S EDG++ L+C VQSGEF+ P G +ID+ P
Sbjct: 26 LPSLEGKVVCVTGCTTGTGFIAARTAAKKGAHVVMLNRQSARSEAAEKSLLEVAPGSNVTSV--ACDLQSFDSVKEAASKLKSMFADKGIDVLCNNAGVMALADEATKDGYDVQMQTNHLSHFLLTKELYPLLEKAAQQRGDARIVNHSSGARKFPSKDLDADYLGKNGGSLGGNGNSMFFGGARWQRYHQTKLANAVFTLALDERLRAKSSKVKALCAAPGLAATNL-----QVTTNQADGFNDTWMMRFAQSGEDGTMPLLQCCVGEGVQSGEFYEPDGMAAMKGKPAKIDLEP 314
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A1Q9DMU3_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DMU3_SYMMI) HSP 1 Score: 223 bits (567), Expect = 7.550e-68 Identity = 123/277 (44.40%), Postives = 169/277 (61.01%), Query Frame = 1
Query: 1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSG-SGLGPPPLNPAFFEKKGGNLGGQEKSY-----------ERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMRGQPPALDSVPSVEDGSLAQLKCVFDPTVQSGEFWNP 795
LP + GK V +TG + G G + A + A+ GA VI+L+R S+RAD AL D+ + F ECDL+ F+SVRKAA + A +G+DVLCNNAGV QPDQA+ DGYD M TN +SHFLLT+++ P L KAA +RGESR++N SSG P + ++ K GG LGG ++S+ ERY SKLANL+FT AL DR++++ ++KAL PG AT + ++ + S EDG+L L+C DP QSG+F++P
Sbjct: 20 LPPMQGKVVAITGCTSGTGLVFARTLAQAGAEVIMLNRSSKRADDALKDVQALTSQ----VTFIECDLMSFASVRKAAIELNQRFASKGLDVLCNNAGVSTQPDQATVDGYDPQMQTNHLSHFLLTQQVWPLLLKAADLRGESRVVNHSSGYRHAHKQPFDVKYYGKNGGQLGGDDESFMETITFHPPGLERYCHSKLANLIFTYALDDRIRQKGLKVKALCANPGFTATRLVANSDRLRSWSDFMARLAQSEEDGTLGILRCACDPLAQSGDFFSP 292
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A7S0MNX3_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MNX3_9CRYP) HSP 1 Score: 223 bits (567), Expect = 8.240e-68 Identity = 130/283 (45.94%), Postives = 180/283 (63.60%), Query Frame = 1
Query: 1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAAASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPP-PLNPAFFEKKGGNLGGQEKS-------YERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTV--MRGQPPA---LDSVPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGG 810
LP + GK V++TG + G G+I A + AKKGA V++L+R+S R++ AL + + + + +CDL+D SSV+KAA VK GIDVLCNNAG+M D+A+KDGYD M TN +SHFLLT+EL+ L KAA+ +GE+R++N SSG+ P PL + K GGNLGG S ++RYHQ+KLAN VFT ALHDRL+ S++K+L APG+ AT++ V + M G A + S EDG++ L+C+ P QSG+F+ P RGG
Sbjct: 24 LPSMQGKNVLITGCTSGTGFIAARAMAKKGAHVVMLNRRSDRSEAALKTLKDEFKNAKITGI--DCDLMDLSSVQKAADAVKQQFP-EGIDVLCNNAGIMADEDKATKDGYDTQMQTNHLSHFLLTKELITLLNKAANSKGEARVVNHSSGARSFPSSPLQAKYLGKNGGNLGGNGSSMLFGGARWQRYHQTKLANAVFTMALHDRLQAAGSRVKSLCAAPGLAATNLQVTTNSTGGMGGSWIASFLMRFSQSAEDGTMPLLRCIAAPDAQSGDFYEP--RGG 301
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A0G4IF92_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IF92_9ALVE) HSP 1 Score: 217 bits (553), Expect = 1.280e-65 Identity = 134/277 (48.38%), Postives = 170/277 (61.37%), Query Frame = 1
Query: 10 LSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDIT-EAAASGARPPMF-FECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPP-PLNPAFFEKKGGNLGGQEKS-----YERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATDMFVHACTVMRGQPPALDS--VPSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGG 810
L GK V VTG + G G I AL AA++GA V+LL+R S RAD ++ EA ASG + CDL F+SV+KA + VK V + VLCNNAGVM D+A++DG+DV M TN +SHFLLTRELMP LE+AA+ GE+R++N SS + PP PL + EK GGNLGG +S + RY Q+KLAN VFT ALHDRL + KSQ+KA+ PGV +T++ + L S S EDG+ L F+P VQSG FW P G
Sbjct: 29 LYGKCVAVTGCTSGTGRIFALEAARRGAHVLLLNRPSERADAVYAEVVKEAGASGGAGKVTKVACDLGSFASVQKACETVKREVPK--LHVLCNNAGVMALQDKATEDGHDVQMQTNHLSHFLLTRELMPLLERAAATDGEARVVNHSSIARKSPPGPLERKYLEKNGGNLGGDSQSLSGARWVRYQQTKLANCVFTYALHDRLVKAKSQVKAVVAHPGVSSTNLLTTSFHHGGFMIARLFSFFAQSAEDGTQGILAAAFEPGVQSGTFWGPHGMNG 303
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Match: A0A813BD46_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813BD46_9DINO) HSP 1 Score: 215 bits (547), Expect = 9.880e-65 Identity = 129/299 (43.14%), Postives = 176/299 (58.86%), Query Frame = 1
Query: 1 LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDITEAA-ASGARPPMFFECDLLDFSSVRKAAQNVKCSVAGRGIDVLCNNAGVMLQPDQASKDGYDVTMSTNIISHFLLTRELMPELEKAASMRGESRIINMSSGSGLGPPP-----LNPAFFEKKGGNLGGQEK------SYERYHQSKLANLVFTSALHDRLKERKSQIKALACAPGVCATD-----MFVHACTVMRGQPPALDSV------PSVEDGSLAQLKCVFDPTVQSGEFWNPQMRGGGLMRID 828
LP ++GK V VTG + G G I A A+KGA ++LL+R+S RA QAL DI+EAA A+GA P CDL+ F SVR A + ++ + G+DVLCNNAG+M D+A++DG D+ M TN +SHFLLT MP L+KAAS+RGE+R++N SS + + P L + +K GGNLGG + ++ RY Q+KLAN+ FT ALH RL+E S++KAL PGV T M + P S+ S EDG++ L+ DP SG+F+ P +GG D
Sbjct: 18 LPSMAGKVVAVTGCTSGTGKIFAQVCAEKGAKLVLLNRESERATQALKDISEAAKAAGAPEPSGIPCDLMSFKSVRAAGEKLQAELRESGLDVLCNNAGIMGFGDKATEDGCDIQMQTNHLSHFLLTYLCMPLLDKAASLRGEARVVNHSSCARVMTGPEFTNKLEEKYMQKNGGNLGGDSEEIMRGANFVRYQQTKLANVAFTYALHKRLQEAGSKVKALVAHPGVAPTQLAQGTMKAGGANDLARYPKWASSIFFKLMYQSEEDGAVGILRNSCDPAANSGDFFGPLGKGGATGAFD 316 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig108.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig108.22.1 >prot_H-akashiwo_Contig108.22.1 ID=prot_H-akashiwo_Contig108.22.1|Name=mRNA_H-akashiwo_Contig108.22.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=279bp LPHLSGKTVVVTGASKGLGYITALSAAKKGASVILLSRKSRRADQALIDIback to top mRNA from alignment at H-akashiwo_Contig108:1487634..1488470- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig108.22.1 ID=mRNA_H-akashiwo_Contig108.22.1|Name=mRNA_H-akashiwo_Contig108.22.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=837bp|location=Sequence derived from alignment at H-akashiwo_Contig108:1487634..1488470- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig108:1487634..1488470- >mRNA_H-akashiwo_Contig108.22.1 ID=mRNA_H-akashiwo_Contig108.22.1|Name=mRNA_H-akashiwo_Contig108.22.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=837bp|location=Sequence derived from alignment at H-akashiwo_Contig108:1487634..1488470- (Heterosigma akashiwo CCMP452)back to top |