mRNA_H-akashiwo_Contig1060.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A7I4XRB0_HAECO (Helitron_like_N domain-containing protein n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4XRB0_HAECO) HSP 1 Score: 157 bits (397), Expect = 4.840e-42 Identity = 105/264 (39.77%), Postives = 136/264 (51.52%), Query Frame = 1 Query: 4 CEHCGAFSFAREKIH------CCHHGKVRVEPDDDYPGGWKELFDDAEI-----LDGAHHFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762 CE CGA F E CC+HG + + ++YP L EI + ++N++ AFAS GA++D + GP C RIHGQIY RIG + P GQP +YGQ+YILD A RM NP S CNP + L + L +N YA+ Y+M+HEVA EEE A EG P K VRMVF RRY+ P EVAA++ DG+ +P H + VH + G + D L YP+LFP GW Sbjct: 68 CESCGAKHFKSESKDKRTFNDCCNHGSISLRHFNNYPVELCRLLASQEIEAKEFREHIRNYNSAFAFASMGAQLDTPCSQGPYCFRIHGQIYHRIGPVLPED-GQPHRYGQVYILDTS---MAAEERMGNPANSS-CNPRLIPSLGELLHQINIYAQAYKMLHEVAVEEELCAAREGRPAKAVRMVFETPA---NVDRRRYNAPTA-NEVAAIYVGNDGD-VPAEH-SLAVHLRGGGLQTIRVIDSECDPLTYPILFPRGELGW 320
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A7I4YRC9_HAECO (ATP-dependent DNA helicase n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4YRC9_HAECO) HSP 1 Score: 154 bits (390), Expect = 4.030e-39 Identity = 102/264 (38.64%), Postives = 135/264 (51.14%), Query Frame = 1 Query: 4 CEHCGAFSFAREKI------HCCHHGKVRVEPDDDYPGGWKELFDDAEI-----LDGAHHFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762 CE CGA F E CC+HG + + ++YP + L EI ++N++ AFAS GA++D GP C RIHGQIY RIG + P GQP +YGQ+YILD A R+ NP S CNP + L + L +N +A+ Y+M+HEVA EEE A EG P K VRMVF RRY+ P+ EVA ++ DG+ +P H + VH + G + D L YP+LFP GW Sbjct: 191 CESCGAKHFKSESKGKRTFNDCCNHGSISLRHFNNYPVELRRLLTSQEIEAKEFRKHIRNYNSAFAFASMGAQLDTPRGHGPYCFRIHGQIYHRIGPVLPED-GQPHRYGQVYILDTS---MAAEERIGNPANTS-CNPRLIQSLGELLHRINVFAQAYKMLHEVAVEEELCAAREGRPAKAVRMVFETPA---NVDRRRYNAPIA-NEVAVIYVGNDGD-VPTEH-SLAVHLRGGGLQTIRVIDPECDPLTYPILFPRGELGW 443
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A158QRD1_HAEPC (ATP-dependent DNA helicase n=2 Tax=Haemonchus TaxID=6288 RepID=A0A158QRD1_HAEPC) HSP 1 Score: 149 bits (377), Expect = 2.220e-37 Identity = 99/265 (37.36%), Postives = 138/265 (52.08%), Query Frame = 1 Query: 4 CEHCGAFSFAREKI-------HCCHHGKVRVEPDDDYPGGWKELF-----DDAEILDGAHHFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762 CE CGA F E CC+HG + +E +YP + L D E + ++N++ AFAS GA++D P +GP C RIHGQIY RIG P +GQP +YGQ+YILD A R NP +C P + L ++N +A+ Y+M+++VA EEEA+A EG VRMVF + RRY+ P EVA V+ ++G+ +P H ++ VH Q+ G + Y D L YP+ FP GW Sbjct: 302 CESCGAQHFRSESRGRRATFNDCCNHGNITLEHFTNYPRQLRRLLTSQEADSKEFREHIRNYNSAFAFASIGAQLD-TPRSGPYCFRIHGQIYHRIGPARPE-EGQPPRYGQVYILDTS---MAADERAGNPAN-VQCKPALIRSLSALFHEINAFAQAYKMLNDVALEEEARALREGRSAMPVRMVF----QSSNLDPRRYNEPTA-NEVAVVYVGEEGD-VPAEH-NLAVHLQSGGLRNIRVYDAECDPLSYPIFFPRGELGW 553
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A0N4W2C0_HAEPC (Helitron_like_N domain-containing protein n=1 Tax=Haemonchus placei TaxID=6290 RepID=A0A0N4W2C0_HAEPC) HSP 1 Score: 145 bits (367), Expect = 4.410e-36 Identity = 101/264 (38.26%), Postives = 133/264 (50.38%), Query Frame = 1 Query: 4 CEHCGAFSFAREKI------HCCHHGKVRVEPDDDYPGGWKELF--DDAEILDGAHH---FNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762 C CGA F E CC+HG + + +YP + L DAE + H +N++ AFAS GA++D GP C RIHGQIY RIG P GQP +YGQ+YILD A RM NP + CNP ++ L L N +A+ Y+M++EVA EE+ A EG K VRMVF RRY+ PV EVA ++ DG+ +P H ++ VH + G + D L YP+LFP GW Sbjct: 309 CGSCGAKHFKSESKGKRTFNDCCNHGTISIRHFINYPEELRRLLTCQDAEAKEFREHIRNYNSAFAFASMGAQLDTPRGHGPYCFRIHGQIYHRIGPARPEC-GQPHRYGQVYILDTS---MAAEERMGNPAN-TNCNPRLIHSLSALLHQTNAFAQAYKMLNEVALEEDLCAAREGRSAKPVRMVFEMPS---NVDRRRYNAPVA-NEVAVIYVGDDGD-VPAEH-NLAVHLRGGGLRSIRVIDPECDPLTYPVLFPHGELGW 561
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A0C2FFX6_9BILA (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2FFX6_9BILA) HSP 1 Score: 145 bits (366), Expect = 6.440e-36 Identity = 101/276 (36.59%), Postives = 142/276 (51.45%), Query Frame = 1 Query: 4 CEHCGAFSFAREK--------IHCCHHGKVRVEPDDDYPGGWKELFD------------DAEILDGAHHFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQAS---GSLFVPYYSEHADGLLYPLLFPTRHSGW 762 C +CGA FA E CC G+ ++ +D+P K LF L+ +FN+S A AS GA+VD GP C RIHGQ+Y RIG+L P QG+PRQYGQIYILD EQA R+ N + + C+P+ + +L + A N YA+ ++MM+EV EE A E P +RM+F E+ R+ A +Y+ P EVA ++ ++ + P R + VH + S + + + D L YPLLFPT GW Sbjct: 231 CSNCGALHFAFEVKPQHPDTFADCCDRGRFNLDLFEDFPEPIKNLFQCGSAASSEERRRQRNFLENIRNFNSSLAMASMGAQVDVPRGRGPYCYRIHGQVYHRIGTLHP-NQGEPRQYGQIYILDT---EQAAQQRLGN-IQNANCDPNLMLFLSEWYAHNNIYAQSFKMMNEVERAEEEAALRENRPPVAIRMIF-EENRERGAARGQYAMPTC-NEVAVIYVGEENDV--PSSRSLAVHLRGSEGTSMINIRDIDKRCDLLTYPLLFPTGRGGW 497
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: W6NIJ2_HAECO (ATP-dependent DNA helicase (Fragment) n=1 Tax=Haemonchus contortus TaxID=6289 RepID=W6NIJ2_HAECO) HSP 1 Score: 145 bits (365), Expect = 8.610e-36 Identity = 99/264 (37.50%), Postives = 133/264 (50.38%), Query Frame = 1 Query: 4 CEHCGAFSFAREKI------HCCHHGKVRVEPDDDYPGGWKELF--DDAEILDGAHH---FNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762 C CGA F E CC+HG + + +YP + L D E + H +N++ AFAS GA++D GP C RIHGQIY RIG P GQP +YGQ+YILD A RM NP + CNP + L L N +A+ Y+M++EVA EE+ +A EG K VRMVF RRY+ P+ EVA ++ +DG+ +P H ++ VH + G + D L YP+LFP GW Sbjct: 320 CASCGAKHFKSESKGKRTFNDCCNHGNISIRHFINYPEELRRLLTCQDPEAREFREHIRSYNSAFAFASMGAQLDTPRGHGPYCFRIHGQIYHRIGPARPEN-GQPHRYGQVYILDTS---MAAEERMGNPANIN-CNPRLIRSLGALLHQSNAFAQAYKMLNEVALEEDCRAAREGRTAKPVRMVFEMPS---NVDRRRYNAPIA-NEVAVIYVGEDGD-VPAEH-NLAVHLRGGGLRSIRVIDAECDPLTYPVLFPYGELGW 572
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: UPI001CA94248 (uncharacterized protein LOC122504049 n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA94248) HSP 1 Score: 140 bits (354), Expect = 2.470e-34 Identity = 92/265 (34.72%), Postives = 148/265 (55.85%), Query Frame = 1 Query: 4 CEHCGAFSFAREK------IHCCHHGKVRVEPDDDYPGGWKELFDDAEILDGAHH------FNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762 CE C A F E+ CCH GKV+++ +DYP + L +D+ LDG + +N+S AFAS GAK++ GP RIHGQ+ +L P G +YGQ+YILD EA R++N + +C P L + + L +V+P+A +MM E+ EEE +A+ + P++ ++M ++++ R + +++ P EVA VF +++GEP P RD+ +H + S S+ + S +AD ++YPL+FP+ GW Sbjct: 510 CEFCAALHFMCERPLDKKFSSCCHKGKVKLDDLNDYPIYLRNLLNDSN-LDGKNFRENIRSYNSSSAFASMGAKLEIPKGYGPYVFRIHGQVCHNTYALHPND-GDSLKYGQLYILDTNEA---VFERLKNE-SNKKCLPSLLEGIDKLLREVSPFADTLKMMREIELEEETRAKLKNKPIRDIQM-WIKRDRSLNQS--KFNVP-SCNEVAVVFVSENGEP--PVDRDICIHPKGSESIPISILSANADPMIYPLMFPSGDLGW 762
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: UPI0010BD93B4 (LOW QUALITY PROTEIN: uncharacterized protein LOC100907114 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BD93B4) HSP 1 Score: 138 bits (347), Expect = 2.260e-33 Identity = 96/265 (36.23%), Postives = 135/265 (50.94%), Query Frame = 1 Query: 22 FSFAREKIH------CCHHGKVRVEPDDDYPGGWKELF--------DDAEILDGAH----HFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762 F R+K H CC+ G+ + ++P ++LF D + + H ++N+S A AS GA+++ GP C RIHGQIY IGSL P +GQPR+YGQ+YILD EQA R++ P C+P+ L L Q L+ +NPYAR ++MM EV E A A+ + P +RMVF + + R Y P EVA ++ DG+ P R + VH + +P + D L YPLLFP GW Sbjct: 410 FESERKKDHPSLFWDCCNIGRFNLSKFQNFPPLLRQLFQRTPEIPSDFSRLQRNFHDLIRNYNSSLAMASMGARIELPRGPGPYCFRIHGQIYHSIGSLHP-DEGQPRRYGQLYILDT---EQAAAQRLRLPXNE-HCDPELLKNLGQLLSSINPYARSFKMMSEVEDAERATAQRQNRPKMTLRMVFHD-FQPHGLSGRLYDVPTV-NEVAIIYVGDDGDV--PEKRALAVHERGGTLTTIPDLDKRGDPLTYPLLFPDGAEGW 665
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: E3N2C7_CAERE (ATP-dependent DNA helicase n=1 Tax=Caenorhabditis remanei TaxID=31234 RepID=E3N2C7_CAERE) HSP 1 Score: 137 bits (346), Expect = 3.030e-33 Identity = 103/279 (36.92%), Postives = 140/279 (50.18%), Query Frame = 1 Query: 4 CEHCGAFSFARE-------KIH-CCHHGKVRVEPD-DDYPGGWKELFDDAE-------------ILDGAHHFNNSCAFASFGAKVDRLPNTG--PPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEH--ADGLLYPLLFPTRHSGW 762 CE+C A F E KI+ CC G +++E D+P +ELF+ + A +NNSCA ASFGAK+D PN G P +++HGQIY G L P + G+ R YGQ+YI+D+ QA RMQ P SRC+ + L Q L +N +A+ Y++MHEV +EE A G K V+MVF + + RRY+ P EVA VF +DG+ +P H + H GS V + D + YPL FP GW Sbjct: 213 CENCQALFFKTEIQGKKKDKINFCCSSGTIKLEEHFADFPPQLQELFEGTDDPNKKERNEQSKNFKSNARQYNNSCAMASFGAKIDHTPNQGRAPYVMKVHGQIYHFAGPLHP-SNGKNRSYGQLYIMDSA---QAAAERMQIPAN-SRCDVTIMQELSQLLTSINVFAQSYKLMHEVEKQEEIDALLAGRSPKPVQMVFDAYKKNLDL--RRYNEPTS-NEVAVVFVQQDGQ-IPSRH---IAAHARDGSGLVNIFDTDPIVDPMTYPLFFPRGILGW 479
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A261AKY4_CAERE (Uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A261AKY4_CAERE) HSP 1 Score: 136 bits (343), Expect = 3.250e-33 Identity = 102/279 (36.56%), Postives = 141/279 (50.54%), Query Frame = 1 Query: 4 CEHCGAFSFARE-------KIH-CCHHGKVRVEPD-DDYPGGWKELFDDAE-------------ILDGAHHFNNSCAFASFGAKVDRLPNTG--PPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEH--ADGLLYPLLFPTRHSGW 762 CE+C A F E KI+ CC G +++E D+P +ELF+ + A +NNSCA ASFGAK+D PN G P +++HGQIY G L P + G+ R YGQ+YI+D+ QA RMQ P S+C+ + L Q L +N +A+ Y++MHEV +EE +A G K V+MVF + + RRY+ P EVA VF +DG+ +P H + H GS V + D + YPL FP GW Sbjct: 300 CENCQALFFKSEIQGKKKDKINFCCSSGTIKLEEHFADFPPQLQELFEGTDDPNKKKRNEQSKNFKSNARQYNNSCAMASFGAKIDHTPNQGRAPYVMKVHGQIYHFAGPLHP-SNGKNRSYGQLYIMDSA---QAAAERMQIPAN-SQCDMTIMQELSQLLTSINVFAQSYKLMHEVEKQEEIEALLAGRTPKPVQMVFDACKKNLDL--RRYNEPTS-NEVAVVFVQQDGQ-IPSRH---IAAHARDGSGLVNIFDTDPIVDPMTYPLFFPRGILGW 566 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1060.4.1 >prot_H-akashiwo_Contig1060.4.1 ID=prot_H-akashiwo_Contig1060.4.1|Name=mRNA_H-akashiwo_Contig1060.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=254bp MCEHCGAFSFAREKIHCCHHGKVRVEPDDDYPGGWKELFDDAEILDGAHHback to top mRNA from alignment at H-akashiwo_Contig1060:144795..145556+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1060.4.1 ID=mRNA_H-akashiwo_Contig1060.4.1|Name=mRNA_H-akashiwo_Contig1060.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=762bp|location=Sequence derived from alignment at H-akashiwo_Contig1060:144795..145556+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1060:144795..145556+ >mRNA_H-akashiwo_Contig1060.4.1 ID=mRNA_H-akashiwo_Contig1060.4.1|Name=mRNA_H-akashiwo_Contig1060.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=762bp|location=Sequence derived from alignment at H-akashiwo_Contig1060:144795..145556+ (Heterosigma akashiwo CCMP452)back to top |