mRNA_H-akashiwo_Contig1060.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1060.4.1
Unique NamemRNA_H-akashiwo_Contig1060.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A7I4XRB0_HAECO (Helitron_like_N domain-containing protein n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4XRB0_HAECO)

HSP 1 Score: 157 bits (397), Expect = 4.840e-42
Identity = 105/264 (39.77%), Postives = 136/264 (51.52%), Query Frame = 1
Query:    4 CEHCGAFSFAREKIH------CCHHGKVRVEPDDDYPGGWKELFDDAEI-----LDGAHHFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762
            CE CGA  F  E         CC+HG + +   ++YP     L    EI      +   ++N++ AFAS GA++D   + GP C RIHGQIY RIG + P   GQP +YGQ+YILD      A   RM NP   S CNP  +  L + L  +N YA+ Y+M+HEVA EEE  A  EG P K VRMVF           RRY+ P    EVAA++   DG+ +P  H  + VH +  G   +       D L YP+LFP    GW
Sbjct:   68 CESCGAKHFKSESKDKRTFNDCCNHGSISLRHFNNYPVELCRLLASQEIEAKEFREHIRNYNSAFAFASMGAQLDTPCSQGPYCFRIHGQIYHRIGPVLPED-GQPHRYGQVYILDTS---MAAEERMGNPANSS-CNPRLIPSLGELLHQINIYAQAYKMLHEVAVEEELCAAREGRPAKAVRMVFETPA---NVDRRRYNAPTA-NEVAAIYVGNDGD-VPAEH-SLAVHLRGGGLQTIRVIDSECDPLTYPILFPRGELGW 320          
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A7I4YRC9_HAECO (ATP-dependent DNA helicase n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4YRC9_HAECO)

HSP 1 Score: 154 bits (390), Expect = 4.030e-39
Identity = 102/264 (38.64%), Postives = 135/264 (51.14%), Query Frame = 1
Query:    4 CEHCGAFSFAREKI------HCCHHGKVRVEPDDDYPGGWKELFDDAEI-----LDGAHHFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762
            CE CGA  F  E         CC+HG + +   ++YP   + L    EI          ++N++ AFAS GA++D     GP C RIHGQIY RIG + P   GQP +YGQ+YILD      A   R+ NP   S CNP  +  L + L  +N +A+ Y+M+HEVA EEE  A  EG P K VRMVF           RRY+ P+   EVA ++   DG+ +P  H  + VH +  G   +       D L YP+LFP    GW
Sbjct:  191 CESCGAKHFKSESKGKRTFNDCCNHGSISLRHFNNYPVELRRLLTSQEIEAKEFRKHIRNYNSAFAFASMGAQLDTPRGHGPYCFRIHGQIYHRIGPVLPED-GQPHRYGQVYILDTS---MAAEERIGNPANTS-CNPRLIQSLGELLHRINVFAQAYKMLHEVAVEEELCAAREGRPAKAVRMVFETPA---NVDRRRYNAPIA-NEVAVIYVGNDGD-VPTEH-SLAVHLRGGGLQTIRVIDPECDPLTYPILFPRGELGW 443          
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A158QRD1_HAEPC (ATP-dependent DNA helicase n=2 Tax=Haemonchus TaxID=6288 RepID=A0A158QRD1_HAEPC)

HSP 1 Score: 149 bits (377), Expect = 2.220e-37
Identity = 99/265 (37.36%), Postives = 138/265 (52.08%), Query Frame = 1
Query:    4 CEHCGAFSFAREKI-------HCCHHGKVRVEPDDDYPGGWKELF-----DDAEILDGAHHFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762
            CE CGA  F  E          CC+HG + +E   +YP   + L      D  E  +   ++N++ AFAS GA++D  P +GP C RIHGQIY RIG   P  +GQP +YGQ+YILD      A   R  NP    +C P  +  L     ++N +A+ Y+M+++VA EEEA+A  EG     VRMVF    +      RRY+ P    EVA V+  ++G+ +P  H ++ VH Q+ G   +  Y    D L YP+ FP    GW
Sbjct:  302 CESCGAQHFRSESRGRRATFNDCCNHGNITLEHFTNYPRQLRRLLTSQEADSKEFREHIRNYNSAFAFASIGAQLD-TPRSGPYCFRIHGQIYHRIGPARPE-EGQPPRYGQVYILDTS---MAADERAGNPAN-VQCKPALIRSLSALFHEINAFAQAYKMLNDVALEEEARALREGRSAMPVRMVF----QSSNLDPRRYNEPTA-NEVAVVYVGEEGD-VPAEH-NLAVHLQSGGLRNIRVYDAECDPLSYPIFFPRGELGW 553          
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A0N4W2C0_HAEPC (Helitron_like_N domain-containing protein n=1 Tax=Haemonchus placei TaxID=6290 RepID=A0A0N4W2C0_HAEPC)

HSP 1 Score: 145 bits (367), Expect = 4.410e-36
Identity = 101/264 (38.26%), Postives = 133/264 (50.38%), Query Frame = 1
Query:    4 CEHCGAFSFAREKI------HCCHHGKVRVEPDDDYPGGWKELF--DDAEILDGAHH---FNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762
            C  CGA  F  E         CC+HG + +    +YP   + L    DAE  +   H   +N++ AFAS GA++D     GP C RIHGQIY RIG   P   GQP +YGQ+YILD      A   RM NP   + CNP  ++ L   L   N +A+ Y+M++EVA EE+  A  EG   K VRMVF           RRY+ PV   EVA ++   DG+ +P  H ++ VH +  G   +       D L YP+LFP    GW
Sbjct:  309 CGSCGAKHFKSESKGKRTFNDCCNHGTISIRHFINYPEELRRLLTCQDAEAKEFREHIRNYNSAFAFASMGAQLDTPRGHGPYCFRIHGQIYHRIGPARPEC-GQPHRYGQVYILDTS---MAAEERMGNPAN-TNCNPRLIHSLSALLHQTNAFAQAYKMLNEVALEEDLCAAREGRSAKPVRMVFEMPS---NVDRRRYNAPVA-NEVAVIYVGDDGD-VPAEH-NLAVHLRGGGLRSIRVIDPECDPLTYPVLFPHGELGW 561          
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A0C2FFX6_9BILA (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2FFX6_9BILA)

HSP 1 Score: 145 bits (366), Expect = 6.440e-36
Identity = 101/276 (36.59%), Postives = 142/276 (51.45%), Query Frame = 1
Query:    4 CEHCGAFSFAREK--------IHCCHHGKVRVEPDDDYPGGWKELFD------------DAEILDGAHHFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQAS---GSLFVPYYSEHADGLLYPLLFPTRHSGW 762
            C +CGA  FA E           CC  G+  ++  +D+P   K LF                 L+   +FN+S A AS GA+VD     GP C RIHGQ+Y RIG+L P  QG+PRQYGQIYILD    EQA   R+ N +  + C+P+ + +L +  A  N YA+ ++MM+EV   EE  A  E  P   +RM+F E+ R+  A   +Y+ P    EVA ++  ++ +   P  R + VH + S     + +    +  D L YPLLFPT   GW
Sbjct:  231 CSNCGALHFAFEVKPQHPDTFADCCDRGRFNLDLFEDFPEPIKNLFQCGSAASSEERRRQRNFLENIRNFNSSLAMASMGAQVDVPRGRGPYCYRIHGQVYHRIGTLHP-NQGEPRQYGQIYILDT---EQAAQQRLGN-IQNANCDPNLMLFLSEWYAHNNIYAQSFKMMNEVERAEEEAALRENRPPVAIRMIF-EENRERGAARGQYAMPTC-NEVAVIYVGEENDV--PSSRSLAVHLRGSEGTSMINIRDIDKRCDLLTYPLLFPTGRGGW 497          
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: W6NIJ2_HAECO (ATP-dependent DNA helicase (Fragment) n=1 Tax=Haemonchus contortus TaxID=6289 RepID=W6NIJ2_HAECO)

HSP 1 Score: 145 bits (365), Expect = 8.610e-36
Identity = 99/264 (37.50%), Postives = 133/264 (50.38%), Query Frame = 1
Query:    4 CEHCGAFSFAREKI------HCCHHGKVRVEPDDDYPGGWKELF--DDAEILDGAHH---FNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762
            C  CGA  F  E         CC+HG + +    +YP   + L    D E  +   H   +N++ AFAS GA++D     GP C RIHGQIY RIG   P   GQP +YGQ+YILD      A   RM NP   + CNP  +  L   L   N +A+ Y+M++EVA EE+ +A  EG   K VRMVF           RRY+ P+   EVA ++  +DG+ +P  H ++ VH +  G   +       D L YP+LFP    GW
Sbjct:  320 CASCGAKHFKSESKGKRTFNDCCNHGNISIRHFINYPEELRRLLTCQDPEAREFREHIRSYNSAFAFASMGAQLDTPRGHGPYCFRIHGQIYHRIGPARPEN-GQPHRYGQVYILDTS---MAAEERMGNPANIN-CNPRLIRSLGALLHQSNAFAQAYKMLNEVALEEDCRAAREGRTAKPVRMVFEMPS---NVDRRRYNAPIA-NEVAVIYVGEDGD-VPAEH-NLAVHLRGGGLRSIRVIDAECDPLTYPVLFPYGELGW 572          
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: UPI001CA94248 (uncharacterized protein LOC122504049 n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA94248)

HSP 1 Score: 140 bits (354), Expect = 2.470e-34
Identity = 92/265 (34.72%), Postives = 148/265 (55.85%), Query Frame = 1
Query:    4 CEHCGAFSFAREK------IHCCHHGKVRVEPDDDYPGGWKELFDDAEILDGAHH------FNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762
            CE C A  F  E+        CCH GKV+++  +DYP   + L +D+  LDG +       +N+S AFAS GAK++     GP   RIHGQ+     +L P   G   +YGQ+YILD  EA      R++N  +  +C P  L  + + L +V+P+A   +MM E+  EEE +A+ +  P++ ++M ++++ R +     +++ P    EVA VF +++GEP  P  RD+ +H + S S+ +   S +AD ++YPL+FP+   GW
Sbjct:  510 CEFCAALHFMCERPLDKKFSSCCHKGKVKLDDLNDYPIYLRNLLNDSN-LDGKNFRENIRSYNSSSAFASMGAKLEIPKGYGPYVFRIHGQVCHNTYALHPND-GDSLKYGQLYILDTNEA---VFERLKNE-SNKKCLPSLLEGIDKLLREVSPFADTLKMMREIELEEETRAKLKNKPIRDIQM-WIKRDRSLNQS--KFNVP-SCNEVAVVFVSENGEP--PVDRDICIHPKGSESIPISILSANADPMIYPLMFPSGDLGW 762          
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: UPI0010BD93B4 (LOW QUALITY PROTEIN: uncharacterized protein LOC100907114 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BD93B4)

HSP 1 Score: 138 bits (347), Expect = 2.260e-33
Identity = 96/265 (36.23%), Postives = 135/265 (50.94%), Query Frame = 1
Query:   22 FSFAREKIH------CCHHGKVRVEPDDDYPGGWKELF--------DDAEILDGAH----HFNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTRHSGW 762
            F   R+K H      CC+ G+  +    ++P   ++LF        D + +    H    ++N+S A AS GA+++     GP C RIHGQIY  IGSL P  +GQPR+YGQ+YILD    EQA   R++ P     C+P+ L  L Q L+ +NPYAR ++MM EV   E A A+ +  P   +RMVF +  +      R Y  P    EVA ++   DG+   P  R + VH +      +P   +  D L YPLLFP    GW
Sbjct:  410 FESERKKDHPSLFWDCCNIGRFNLSKFQNFPPLLRQLFQRTPEIPSDFSRLQRNFHDLIRNYNSSLAMASMGARIELPRGPGPYCFRIHGQIYHSIGSLHP-DEGQPRRYGQLYILDT---EQAAAQRLRLPXNE-HCDPELLKNLGQLLSSINPYARSFKMMSEVEDAERATAQRQNRPKMTLRMVFHD-FQPHGLSGRLYDVPTV-NEVAIIYVGDDGDV--PEKRALAVHERGGTLTTIPDLDKRGDPLTYPLLFPDGAEGW 665          
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: E3N2C7_CAERE (ATP-dependent DNA helicase n=1 Tax=Caenorhabditis remanei TaxID=31234 RepID=E3N2C7_CAERE)

HSP 1 Score: 137 bits (346), Expect = 3.030e-33
Identity = 103/279 (36.92%), Postives = 140/279 (50.18%), Query Frame = 1
Query:    4 CEHCGAFSFARE-------KIH-CCHHGKVRVEPD-DDYPGGWKELFDDAE-------------ILDGAHHFNNSCAFASFGAKVDRLPNTG--PPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEH--ADGLLYPLLFPTRHSGW 762
            CE+C A  F  E       KI+ CC  G +++E    D+P   +ELF+  +                 A  +NNSCA ASFGAK+D  PN G  P  +++HGQIY   G L P + G+ R YGQ+YI+D+    QA   RMQ P   SRC+   +  L Q L  +N +A+ Y++MHEV  +EE  A   G   K V+MVF    + +    RRY+ P    EVA VF  +DG+ +P  H   +  H   GS  V  +      D + YPL FP    GW
Sbjct:  213 CENCQALFFKTEIQGKKKDKINFCCSSGTIKLEEHFADFPPQLQELFEGTDDPNKKERNEQSKNFKSNARQYNNSCAMASFGAKIDHTPNQGRAPYVMKVHGQIYHFAGPLHP-SNGKNRSYGQLYIMDSA---QAAAERMQIPAN-SRCDVTIMQELSQLLTSINVFAQSYKLMHEVEKQEEIDALLAGRSPKPVQMVFDAYKKNLDL--RRYNEPTS-NEVAVVFVQQDGQ-IPSRH---IAAHARDGSGLVNIFDTDPIVDPMTYPLFFPRGILGW 479          
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Match: A0A261AKY4_CAERE (Uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A261AKY4_CAERE)

HSP 1 Score: 136 bits (343), Expect = 3.250e-33
Identity = 102/279 (36.56%), Postives = 141/279 (50.54%), Query Frame = 1
Query:    4 CEHCGAFSFARE-------KIH-CCHHGKVRVEPD-DDYPGGWKELFDDAE-------------ILDGAHHFNNSCAFASFGAKVDRLPNTG--PPCLRIHGQIYRRIGSLEPRTQGQPRQYGQIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYRMMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEVAAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEH--ADGLLYPLLFPTRHSGW 762
            CE+C A  F  E       KI+ CC  G +++E    D+P   +ELF+  +                 A  +NNSCA ASFGAK+D  PN G  P  +++HGQIY   G L P + G+ R YGQ+YI+D+    QA   RMQ P   S+C+   +  L Q L  +N +A+ Y++MHEV  +EE +A   G   K V+MVF    + +    RRY+ P    EVA VF  +DG+ +P  H   +  H   GS  V  +      D + YPL FP    GW
Sbjct:  300 CENCQALFFKSEIQGKKKDKINFCCSSGTIKLEEHFADFPPQLQELFEGTDDPNKKKRNEQSKNFKSNARQYNNSCAMASFGAKIDHTPNQGRAPYVMKVHGQIYHFAGPLHP-SNGKNRSYGQLYIMDSA---QAAAERMQIPAN-SQCDMTIMQELSQLLTSINVFAQSYKLMHEVEKQEEIEALLAGRTPKPVQMVFDACKKNLDL--RRYNEPTS-NEVAVVFVQQDGQ-IPSRH---IAAHARDGSGLVNIFDTDPIVDPMTYPLFFPRGILGW 566          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1060.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7I4XRB0_HAECO4.840e-4239.77Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A7I4YRC9_HAECO4.030e-3938.64ATP-dependent DNA helicase n=1 Tax=Haemonchus cont... [more]
A0A158QRD1_HAEPC2.220e-3737.36ATP-dependent DNA helicase n=2 Tax=Haemonchus TaxI... [more]
A0A0N4W2C0_HAEPC4.410e-3638.26Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A0C2FFX6_9BILA6.440e-3636.59ATP-dependent DNA helicase (Fragment) n=1 Tax=Ancy... [more]
W6NIJ2_HAECO8.610e-3637.50ATP-dependent DNA helicase (Fragment) n=1 Tax=Haem... [more]
UPI001CA942482.470e-3434.72uncharacterized protein LOC122504049 n=1 Tax=Lepto... [more]
UPI0010BD93B42.260e-3336.23LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
E3N2C7_CAERE3.030e-3336.92ATP-dependent DNA helicase n=1 Tax=Caenorhabditis ... [more]
A0A261AKY4_CAERE3.250e-3336.56Uncharacterized protein (Fragment) n=1 Tax=Caenorh... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1060contigH-akashiwo_Contig1060:144795..145556 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7668.SPU_009081-tr
PFAMsHelitron_like_N,PIF1
Model size762
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.75e-38
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota,38G2J@33154|Opisthokonta,3BIV7@33208|Metazoa,3D0M2@33213|Bilateria
DescriptionDNA helicase activity
Cds size762
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387066.107337-CDS-H-akashiwo_Contig1060:144794..1455561681387066.107337-CDS-H-akashiwo_Contig1060:144794..145556Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1060 144795..145556 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1060.4.1prot_H-akashiwo_Contig1060.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1060 144795..145556 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1060.4.1

>prot_H-akashiwo_Contig1060.4.1 ID=prot_H-akashiwo_Contig1060.4.1|Name=mRNA_H-akashiwo_Contig1060.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=254bp
MCEHCGAFSFAREKIHCCHHGKVRVEPDDDYPGGWKELFDDAEILDGAHH
FNNSCAFASFGAKVDRLPNTGPPCLRIHGQIYRRIGSLEPRTQGQPRQYG
QIYILDAQEAEQATHHRMQNPVTRSRCNPDRLNWLHQTLADVNPYARDYR
MMHEVATEEEAKAEAEGTPVKKVRMVFLEKGRQITAQSRRYSRPVERGEV
AAVFATKDGEPLPPHHRDVVVHHQASGSLFVPYYSEHADGLLYPLLFPTR
HSGW
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mRNA from alignment at H-akashiwo_Contig1060:144795..145556+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1060.4.1 ID=mRNA_H-akashiwo_Contig1060.4.1|Name=mRNA_H-akashiwo_Contig1060.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=762bp|location=Sequence derived from alignment at H-akashiwo_Contig1060:144795..145556+ (Heterosigma akashiwo CCMP452)
ATGTGCGAACATTGTGGAGCATTTTCATTTGCGCGAGAAAAAATACACTG CTGTCATCATGGAAAGGTTAGAGTTGAGCCGGATGACGACTATCCTGGAG GCTGGAAGGAGTTGTTTGATGATGCAGAGATTCTGGATGGTGCTCATCAT TTTAACAATTCCTGTGCATTTGCTTCTTTTGGGGCTAAAGTAGACCGTCT TCCCAACACTGGACCGCCTTGCTTAAGAATACATGGCCAGATCTACCGGC GCATCGGTTCCCTTGAACCTCGCACGCAAGGCCAACCTCGACAATATGGG CAAATCTACATTCTGGATGCCCAAGAAGCTGAACAGGCAACCCACCACAG AATGCAAAATCCAGTGACTCGCAGTAGGTGCAACCCTGACCGCCTTAATT GGCTTCATCAAACCCTTGCTGATGTCAATCCATATGCACGTGACTACCGC ATGATGCATGAAGTTGCAACAGAGGAGGAAGCCAAGGCTGAAGCAGAAGG AACTCCTGTTAAAAAAGTCAGAATGGTATTTCTGGAGAAGGGGCGTCAGA TCACTGCTCAGAGCCGCAGGTACAGCAGGCCGGTTGAGCGGGGTGAAGTG GCTGCGGTCTTTGCTACCAAGGACGGCGAACCACTGCCTCCACACCACCG TGATGTTGTTGTGCACCACCAGGCCAGTGGCTCACTCTTTGTGCCTTACT ACTCAGAACATGCAGACGGTTTGCTCTACCCTCTTCTGTTCCCTACCAGA CACAGCGGATGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1060:144795..145556+

>mRNA_H-akashiwo_Contig1060.4.1 ID=mRNA_H-akashiwo_Contig1060.4.1|Name=mRNA_H-akashiwo_Contig1060.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=762bp|location=Sequence derived from alignment at H-akashiwo_Contig1060:144795..145556+ (Heterosigma akashiwo CCMP452)
ATGTGCGAACATTGTGGAGCATTTTCATTTGCGCGAGAAAAAATACACTG
CTGTCATCATGGAAAGGTTAGAGTTGAGCCGGATGACGACTATCCTGGAG
GCTGGAAGGAGTTGTTTGATGATGCAGAGATTCTGGATGGTGCTCATCAT
TTTAACAATTCCTGTGCATTTGCTTCTTTTGGGGCTAAAGTAGACCGTCT
TCCCAACACTGGACCGCCTTGCTTAAGAATACATGGCCAGATCTACCGGC
GCATCGGTTCCCTTGAACCTCGCACGCAAGGCCAACCTCGACAATATGGG
CAAATCTACATTCTGGATGCCCAAGAAGCTGAACAGGCAACCCACCACAG
AATGCAAAATCCAGTGACTCGCAGTAGGTGCAACCCTGACCGCCTTAATT
GGCTTCATCAAACCCTTGCTGATGTCAATCCATATGCACGTGACTACCGC
ATGATGCATGAAGTTGCAACAGAGGAGGAAGCCAAGGCTGAAGCAGAAGG
AACTCCTGTTAAAAAAGTCAGAATGGTATTTCTGGAGAAGGGGCGTCAGA
TCACTGCTCAGAGCCGCAGGTACAGCAGGCCGGTTGAGCGGGGTGAAGTG
GCTGCGGTCTTTGCTACCAAGGACGGCGAACCACTGCCTCCACACCACCG
TGATGTTGTTGTGCACCACCAGGCCAGTGGCTCACTCTTTGTGCCTTACT
ACTCAGAACATGCAGACGGTTTGCTCTACCCTCTTCTGTTCCCTACCAGA
CACAGCGGATGG
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