mRNA_H-akashiwo_Contig1060.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 393 bits (1009), Expect = 7.510e-134 Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 1 Query: 1 SSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAVRKLRRP 582 SSSNFNAPIVMVAKK+GETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPD KKIEAVRKLRRP Sbjct: 129 SSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRP 322
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 393 bits (1009), Expect = 2.120e-131 Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 1 Query: 1 SSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAVRKLRRP 582 SSSNFNAPIVMVAKK+GETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPD KKIEAVRKLRRP Sbjct: 129 SSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRP 322
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 316 bits (810), Expect = 3.650e-106 Identity = 150/184 (81.52%), Postives = 168/184 (91.30%), Query Frame = 1 Query: 31 MVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAVRKLRRP 582 MV KKTGETRMCLDLR+LNAITTP+KFPLPT REMFD L AYYF+SLDMLWAYWSVPLR+ DK KTAFTVRN+KYAFNVMCFGLTNAPATFSHLVNKVFQGCQ++FALCFLDDVLCY+ +F+LHL L +IF RM ANLKFKLPKC+FGAAQ+PFLGH+A+REGLKPD KKIEA++KL+RP Sbjct: 1 MVKKKTGETRMCLDLRSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRP 184
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: A0A015J1N0_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J1N0_RHIIW) HSP 1 Score: 173 bits (438), Expect = 5.800e-49 Identity = 82/188 (43.62%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 1 SSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAV 564 S+S ++ P+V+V KK G+ R C++ + LN IT +PLP E+ D+L +A +FT+LD+ YW + +R D+ KTAF + Y F VM FGL NAPATF ++KV G + +F L +LDDV+ YS + F H+ HL ++ R+R ANL+ K KC F AA++ FLGH+ +EG+KPD +K+ + Sbjct: 10 STSPWSFPVVVVKKKNGKLRFCVNYKPLNDITKKDNYPLPRIDELLDSLQDAQWFTTLDLASGYWQIKVRAEDQEKTAFITKFGTYEFKVMPFGLCNAPATFQRTMDKVLHGIKEKFVLVYLDDVIIYS-KTFKDHIQHLEEVLNRIRKANLRLKAEKCYFAAAELQFLGHVVGKEGVKPDPEKVNKM 196
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: A0A0P5XPI7_9CRUS (Polyprotein of retroviral origin (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5XPI7_9CRUS) HSP 1 Score: 171 bits (432), Expect = 3.090e-48 Identity = 86/194 (44.33%), Postives = 121/194 (62.37%), Query Frame = 1 Query: 1 SSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAVRKLRRP 582 S S F A IVMV KK GE RMC+D RALN IT K+PLP + D L ++YF+ LD+L YW + + E DK KTAF +Y FN M FGLTNAP+TF +N + + Y+FAL +LDD++ +S + T H+ HL +F+ ++ A LK K KC F ++ +LG++ S +G+ P KK++A+ K P Sbjct: 132 SHSPFAAAIVMVPKKDGEMRMCIDYRALNKITVKDKYPLPRIDDTIDALCGSFYFSILDLLSGYWQIEIEESDKHKTAFICEFGQYEFNRMPFGLTNAPSTFQRAMNNILKTVLYKFALVYLDDIIVFS-NSITDHVTHLEAVFRLLKQAGLKLKRKKCEFFKEKLDYLGYIVSGKGITPSTKKLDAIVKYPAP 324
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: A0A6B0VG58_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG58_IXORI) HSP 1 Score: 177 bits (448), Expect = 6.560e-48 Identity = 87/194 (44.85%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 1 SSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAVRKLRRP 582 S S+F++P+V+V KK G R C+D R LN IT +P+P + D+L A YF+SLD+ YW +P+ E DK KTAF + Y FNVM FGL NAPATF +++ + +G +++ LC+LDD++ +S NF HL LSQ+ + AANL+ KC F A I LGH+ S+ G++PD KI+AV RP Sbjct: 68 SCSSFSSPVVLVKKKDGGIRFCIDYRELNEITRKDLYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPVNEEDKEKTAFVTPDGLYEFNVMPFGLCNAPATFERMIDNILRGLKWKTCLCYLDDIVIFSS-NFEEHLERLSQVLSCLSAANLQLNTKKCTFAAKTIKILGHVISKHGIRPDPDKIKAVSDFPRP 260
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: UPI001C1C713A (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1C713A) HSP 1 Score: 166 bits (421), Expect = 8.090e-47 Identity = 79/189 (41.80%), Postives = 121/189 (64.02%), Query Frame = 1 Query: 1 SSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAVR 567 S+S ++ P+V+V KK G+ + C++ + LN IT +PLP E+ D+L +A +FT+LD+ YW + +R D+ KTAF + Y F VM FGL NAP TF ++KV + +F L +LDDV+ YS + F H+ HL ++ R+R ANL+ K KC F AA++ FLGH+ +EG+KPD +K+ ++ Sbjct: 68 STSPWSFPVVVVKKKNGKLKFCVNYKPLNNITKKDNYPLPRIDELLDSLQDAQWFTTLDLASEYWQIKVRAEDQEKTAFITKFGTYEFKVMPFGLCNAPVTFQRTMDKVLHRIKEKFVLVYLDDVIIYS-KTFKDHIQHLKEVLNRIRKANLRLKAEKCHFAAAELQFLGHVVGKEGVKPDPEKVNKMK 255
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: UPI001C1C4880 (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1C4880) HSP 1 Score: 164 bits (416), Expect = 1.820e-46 Identity = 79/192 (41.15%), Postives = 116/192 (60.42%), Query Frame = 1 Query: 7 SNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAVRKLRRP 582 SN+ +P+ + KKTG R C+D R LN +T ++PLP E+ + + +FTSLD+ Y V + E DK KTAF Y +NVM FGL NAP TF L++K+ + EF +LDD++ YS +F H+ H+ ++ ++R N+ KL KC FG I FLGH+ R+GL+PD +K+E + +RRP Sbjct: 9 SNWASPVTLAGKKTGNYRFCIDYRKLNNVTKSDEYPLPRIDELLEKFRKGSWFTSLDLAAGYHQVEMAEEDKEKTAFICSQGLYEYNVMPFGLKNAPGTFQRLMDKILKEYIGEFVTVYLDDIMIYSE-DFEEHIEHVDKVLSKLRENNMIVKLKKCQFGLRNINFLGHIVGRDGLRPDKEKVEKIENMRRP 199
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: A0A131XQ77_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131XQ77_IXORI) HSP 1 Score: 172 bits (436), Expect = 2.770e-46 Identity = 82/188 (43.62%), Postives = 119/188 (63.30%), Query Frame = 1 Query: 1 SSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAV 564 S+S++++P+V+V KK G R C+D R LN IT +P+P + D L A Y+TSLD+ YW +P+ E DK+KTAF + + FNVM FGL NAPATF +++ + +G ++ LC+LDDV+ +S F HL LS++ + A L+ KC F A QI LGHL SR+G++PD +K+ AV Sbjct: 84 SNSSWSSPVVLVRKKDGSVRFCVDYRKLNNITQKDSYPMPRIDDALDTLQGAKYYTSLDLRSGYWQIPMSESDKAKTAFVTPDGLFEFNVMPFGLCNAPATFERMIDSILRGLKWRTCLCYLDDVIVFSS-TFDEHLDRLSEVLSCISGAGLQLNTKKCHFAATQIKVLGHLVSRDGIRPDPEKVRAV 270
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Match: A0A2P6R624_ROSCH (Putative nucleotidyltransferase, Ribonuclease H n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R624_ROSCH) HSP 1 Score: 172 bits (436), Expect = 3.120e-46 Identity = 84/194 (43.30%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 1 SSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDLKKIEAVRKLRRP 582 S+S F++P+++V KK G RMC+D R+LNA+T KFP+P E+ D L + YFT LD+ Y + + E D KTAF Y F VM FGLTNAP+TF L+N +F+ +F L F DD+L YS ++ HL HL+ +F ++ LK K+ KC FGA + +LGH+ S +G+ D +KIEA++ ++P Sbjct: 128 STSPFSSPVILVKKKDGSKRMCVDYRSLNAVTVKDKFPIPIVDELLDELHGSVYFTKLDLRSGYHQIRMHEADVHKTAFRTHQGHYEFLVMPFGLTNAPSTFQSLMNDIFKDHLRKFVLVFFDDILIYS-KSLEEHLQHLAVVFSKLEEHQLKVKMSKCTFGAKSVEYLGHVISEKGVAVDPEKIEAIKNWKKP 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1060.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1060.3.1 >prot_H-akashiwo_Contig1060.3.1 ID=prot_H-akashiwo_Contig1060.3.1|Name=mRNA_H-akashiwo_Contig1060.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=184bp MVAKKTGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMback to top mRNA from alignment at H-akashiwo_Contig1060:78093..78674- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1060.3.1 ID=mRNA_H-akashiwo_Contig1060.3.1|Name=mRNA_H-akashiwo_Contig1060.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=582bp|location=Sequence derived from alignment at H-akashiwo_Contig1060:78093..78674- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1060:78093..78674- >mRNA_H-akashiwo_Contig1060.3.1 ID=mRNA_H-akashiwo_Contig1060.3.1|Name=mRNA_H-akashiwo_Contig1060.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=552bp|location=Sequence derived from alignment at H-akashiwo_Contig1060:78093..78674- (Heterosigma akashiwo CCMP452)back to top |