mRNA_H-akashiwo_Contig1060.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: A0A7S3YHD9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YHD9_HETAK) HSP 1 Score: 299 bits (766), Expect = 1.850e-97 Identity = 149/292 (51.03%), Postives = 196/292 (67.12%), Query Frame = 1 Query: 70 GCDS--GIGLQTVQHLAEDSEVHIIAICLTDEGTKRVQALGAVTAIKCDLKDPRSIRQAATLALSVASAD-IWAVVHCAGLVKGGFLDFQPISNFREVMEVNFFGTVALNQLLMPAVKRAQGRVVFVSSVAGLVPFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDSYSKEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEANQKLNESVCEDPIIVAKDIKHAIGAVHPRSRYLSGTFAKTLIHKLWCLPEAQAYKLSKALMPIYPP 936 GCD+ G G +Q L H+IA+CLT +G K+ A GA AI+CDL SIR AA L D +W VVH AGLVKGG FQP+SN+REVMEVNFFG VALNQL+MPA+++A+GRVV VSSV G+V G PY SK+A+EA+ L++E W + +A VNP+ MKTP+ +Y + TW+KM +D+T DAY++++KDW EW+ WL F E K ES+ +DP+I A+DI HA+ A HPR RYLSGT AKTL + LWC+PE+ +Y + K +M +PP Sbjct: 1 GCDNKTGFGYLALQSLLARG-AHVIALCLTSDGIKQATAAGAKVAIQCDLTKQESIRAAAKHILETTKVDGLWGVVHNAGLVKGGCTFFQPMSNYREVMEVNFFGVVALNQLIMPAIQQAKGRVVLVSSVDGIVSLPGNAPYDASKFALEAFVDCLRIEASYWGVKVAVVNPATMKTPLALAYFDTVKQTWQKMDASDDTPDAYIDNNKDWKLEWNSEWLKSFTEEGAKNLESIAQDPMITARDILHALEAKHPRHRYLSGTLAKTLFYFLWCMPESVSYAVKKKIMMTHPP 291
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: A0Z1D4_9GAMM (Short chain dehydrogenase n=1 Tax=marine gamma proteobacterium HTCC2080 TaxID=247639 RepID=A0Z1D4_9GAMM) HSP 1 Score: 243 bits (619), Expect = 4.890e-75 Identity = 123/309 (39.81%), Postives = 179/309 (57.93%), Query Frame = 1 Query: 10 YRHYRYGKKLNLKNKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLTDEGTKRVQALGAVTAIKCDLKDPRSIRQAATLALSVASADIWAVVHCAGLVKGGFLDFQPISNFREVMEVNFFGTVALNQLLMPAVKRAQGRVVFVSSVAGLVPFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDSYSKEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEANQKLNESVCEDPIIVAKDIKHAIGAVHPRSRYLSGTFAKTLIHKLWCLPEAQAYKLSKALMPIYPP 936 Y+ ++ + L++ +++++VTGCDSGIG V+ LA+D ++A C T+ G A GA A DL D ++R A L+ + +W VVH AG V GF+D+QPI +R+VM VNFF V L Q L+ A++R +GRV+ VSSV G+V G PY SK+AIEAYA L+ E + ++ +NP+ M+TPM D++ R TW MA D DW W WL+++VE N + S+ EDP DI HA A HP+ RYLSG AK+L + LW +PE+ + ++ + + PP Sbjct: 33 YKKFKSRRHLDITDQWVVVTGCDSGIGQGAVRALAKDG-AKVVACCYTETGANAALAAGATWAPHFDLSDDGALRDVAEQILTQSGGALWCVVHAAGTVLPGFIDYQPIKFYRDVMAVNFFAPVLLTQKLLTALRRCRGRVIVVSSVDGIVSLPGNAPYDASKFAIEAYADALRTELSFCGVGVSVINPATMRTPMADAFFPGHRKTWTAMAAEDP--------EGDWQALWPESWLNQYVEKNTRQLRSIAEDPAAAVNDIVHAATAAHPKLRYLSGRLAKSLFYALWLMPESWSLRIKRLTVQPKPP 332
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: A0A2E7XH05_9GAMM (Short-chain dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7XH05_9GAMM) HSP 1 Score: 235 bits (599), Expect = 6.300e-72 Identity = 125/302 (41.39%), Postives = 179/302 (59.27%), Query Frame = 1 Query: 34 KLNLKNKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLTDEGTKRVQALGAVTAIKCDLKDPRSIRQAATLALSVASADIWAVVHCAGLVKGGFLDFQPISNFREVMEVNFFGTVALNQLLMPAVKRAQGRVVFVSSVAGLVPFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDSYSKEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEANQKLNESVCEDPIIVAKDIKHAIGAVHPRSRYLSGTFAKTLIHKLWCLPEAQAYKLSKALMPIYPPP 939 +LN+ +++++VTGCDSG G V+HL ++A C T+EG + LGA +A + DL D +I A + + +W +VH AG+V GF+D+QP+S +R VMEVNFF VAL Q L+P ++ A+GRVV +SSV GLV G PY SK+AIEAYA L++E N+ ++ VNPS M+TP+ S+ + W +M R +N W Q++ WLD +++AN + + + +DP DI H I A PR RYLSGT AKTL + LW PE+ + +A I PPP Sbjct: 45 QLNVTDRYVVVTGCDSGFGQGVVKHLVARG-ARVVACCFTEEGAQTAITLGATSAPRVDLTDLDAIAALAADVKAQCNGKLWGLVHNAGVVLPGFVDYQPLSFYRHVMEVNFFAPVALTQHLLPELRAAEGRVVLISSVDGLVSLPGNAPYDASKFAIEAYADALRVELAAANVDVSVVNPSTMRTPLAMSFFDGHQKAWNEMNR--------LNPDGAWKQQYPADWLDAYIKANAENLKRIAQDPQHAIGDIVHGICAKRPRLRYLSGTLAKTLFYALWVGPESWSXAFKRAT--IQPPP 335
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: B8KW91_9GAMM (Putative 11-cis retinol dehydrogenase n=1 Tax=Luminiphilus syltensis NOR5-1B TaxID=565045 RepID=B8KW91_9GAMM) HSP 1 Score: 231 bits (590), Expect = 8.060e-71 Identity = 115/306 (37.58%), Postives = 179/306 (58.50%), Query Frame = 1 Query: 10 YRHYRYGKKLNLKNKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLTDEGTKRVQALGAVTAIKCDLKDPRSIRQAATLALSVASADIWAVVHCAGLVKGGFLDFQPISNFREVMEVNFFGTVALNQLLMPAVKRAQGRVVFVSSVAGLVPFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDSYSKEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEANQKLNESVCEDPIIVAKDIKHAIGAVHPRSRYLSGTFAKTLIHKLWCLPEAQAYKLS-KALMP 924 +R +R +L++ +K I+VTGCDSG G +Q L +++A+ T+EG GA A+ CDL +P + A A ++W +VH AG+ GF+++QP++N++ ++VNF VALN+ ++PA+K+A+GR+V +SSV G+V G PY +K+A+E YA L++E W++ ++ VNPS MKTP+ + + R TWE R D N S W Q + WL+ ++ N E + +DP + KD++HA+ A PR RYLSG FAKT LW +PE A+ + K + P Sbjct: 25 WRAFREKAELDVADKTIVVTGCDSGFGEGVMQRLIGRG-ANVVALTYTEEGAAAALDSGAKAALACDLGNPAGQQWAIDFIHQHAGEELWGIVHSAGIALPGFVEYQPLANYQRTLDVNFMAIVALNKAIIPAIKKAKGRIVMISSVDGIVSLPGNAPYDAAKFALEGYADALRMELSFWDVSVSVVNPSTMKTPLVMQFFESHRPTWEAQQRED------PNGS--WQQAYPADWLNEYIAVNTPNLERIADDPAVTVKDLEHALIARSPRHRYLSGKFAKTFFRALWLMPERWAHAIKLKTIQP 321
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: A0A6G0J6K4_LARCR (Uncharacterized protein n=3 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0J6K4_LARCR) HSP 1 Score: 143 bits (360), Expect = 1.380e-36 Identity = 97/293 (33.11%), Postives = 158/293 (53.92%), Query Frame = 1 Query: 10 YRHYRYGKKL-NLKNKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLTDEGTKRVQ--ALGAVTAIKCDLKDPRSIRQAATLALSVASAD-IWAVVHCAGL-VKGGFLDFQPISNFREVMEVNFFGTVALNQLLMPAVKRAQGRVVFVSSVAGLV-PFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDS--YSKEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEA-NQKLNESVCEDPIIVAKDIKHAIGAVHPRSRYLSGTFAKTL 861 YR Y+ K++ N NK++ +TGCDSG G +HL + +IA C T+ G ++ A G +T I D+ D S+R+AA SV +WAVV+ AG+ V G D+ I +F+ ++ VN +G + + ++P +K +GRVV V+SV G + PF G PY SKY +E++ L+L + + +A + P KT +TD+ R+ W+K+ + D KD ++ +G+L ++ + + + D + V ++HA+ AVHPR+RY G AK L Sbjct: 23 YRWYKERKRVPNKGNKYVYITGCDSGFGNVLAKHL-DQLGFCVIASCYTENGEDELKKNASGRLTTIHLDVTDSESVRKAAAFIKSVVGEKGLWAVVNNAGVSVPSGPTDWLTIDDFKSMISVNLYGVIDVTLSVLPLIKMTKGRVVNVASVFGRISPFGG--PYCVSKYGVESFNDSLRLNMAPFGVKVACIEPGFFKTNVTDTALVKDNIRNLWDKLPQ----------DIKD---DYGKGFLASSLDKLDSRFRQLTDSDLMKVISCMEHAVSAVHPRTRYSPGWDAKLL 299
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: UPI000A2A93C5 (retinol dehydrogenase 7 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A93C5) HSP 1 Score: 142 bits (358), Expect = 2.830e-36 Identity = 83/273 (30.40%), Postives = 150/273 (54.95%), Query Frame = 1 Query: 49 NKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLTDEGTKRVQALGA--VTAIKCDLKDPRSIRQA-ATLALSVASADIWAVVHCAGLVKGGFLDFQPISNFREVMEVNFFGTVALNQLLMPAVKRAQGRVVFVSSVAGLVPFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDSY-SKEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEANQKLNESVCEDPIIVAKDIKHAIGAVHPRSRYLSGTFAK 855 +K++L+TGCDSG G T L + +IA CLTD+G + ++ + + + +I D+ + + I + A + V+ IWA+V+ AG++ G +++ + +F+ + +VN +G + + Q +P VK+A+GRVV V SVAG++ GPY +KY +EA++ L+ E N+ ++ + P A +TP+ + K+ W++++ D + +D + +E +G DR + N K+ V I A+ + P+ RYL G FAK Sbjct: 50 SKYVLITGCDSGFGKMTAIRL-DRLGFRVIAACLTDQGKENIKKICSDRLVSINLDVTNSKQIHEVFAKVKHLVSEKGIWALVNNAGIITNGPIEWFKMEDFKRMADVNLWGLIEVTQTFLPLVKKAEGRVVNVGSVAGIMTVFSFGPYSVTKYGVEAFSDALRREMVEHNVKVSIIEPQAFRTPLVNGLCGKKLDELWDRLS--DEKKSEFSSDCLEKAREGIKGIFDRGLNENPKM----------VVDAITDAVSSRDPQPRYLVGPFAK 309
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: UPI001FB7CFC1 (dehydrogenase/reductase SDR family member 9 n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB7CFC1) HSP 1 Score: 142 bits (357), Expect = 3.170e-36 Identity = 98/291 (33.68%), Postives = 160/291 (54.98%), Query Frame = 1 Query: 10 YRHYRYGKKLNLK-NKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLTDEGTKRVQALGA--VTAIKCDLKDPRSIRQAATLALS-VASADIWAVVHCAGL-VKGGFLDFQPISNFREVMEVNFFGTVALNQLLMPAVKRAQGRVVFVSSVAGLV-PFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDSYS--KEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEANQKLNESVCEDPII-VAKDIKHAIGAVHPRSRYLSGTFAK 855 YR YR K+++ K +K++ +TGCDSG G +HL + + +IA C TD+G ++ + +T I D+ D +S+ +AA + S V +WAVV+ AG+ V G D+ I +F++++ VN G + + ++P +K+A+GRVV V+SV G + PF G PY SKY +EA+ L+L + + +A + P KT +TD+ + R WE + + D KD ++ +LD +E K + + ++ V ++HAI AVHPR+RY G AK Sbjct: 15 YRWYRESKRVSNKGDKYVYITGCDSGFGNLLARHLDKLGFL-VIAGCYTDKGEDELKKSSSERLTTIHVDVSDSKSVSKAADVIKSLVGQKGLWAVVNNAGVSVPSGPTDWLTIDDFKKMLAVNLTGVIDVTLSVLPVIKKAKGRVVNVASVFGRISPFGG--PYCVSKYGVEAFNDGLRLNMAPFRVKVACIEPGFFKTNVTDTVALKNNMRKLWESLPQ----------DVKD---DYGHKFLDNALETMDKTMTQLSDQDLMKVVGCMEHAISAVHPRTRYSPGWDAK 289
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: A0A820A8P0_9BILA (Hypothetical protein n=5 Tax=Adineta steineri TaxID=433720 RepID=A0A820A8P0_9BILA) HSP 1 Score: 140 bits (354), Expect = 1.090e-35 Identity = 81/280 (28.93%), Postives = 143/280 (51.07%), Query Frame = 1 Query: 10 YRHYRYGKKLNLKNKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLTD-EGTKRVQALGAVTAIKCDLKDPRSIRQAATLALSVASADIWAVVHCAGLVKGGFLDFQPISNFREVMEVNFFGTVALNQLLMPAV-KRAQGRVVFVSSVAGLVPFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDSYSKEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEANQKLNESVCEDPIIVAKDIKHAIGAVHPRSRYLSG 843 Y+H+ K ++ + K++L++GCD+G G L + + D + T + T K D+ + + I TL S S+ + A+V+ AG+ GG +D+ ++ R+VM+VNFFG VA+ + +P + RVV +SS AG + AG Y SKYA+EA++ L+ E +WN+H++ + P M+TP+ + S++ + W VN+SK + W + +V K+ + ++P+ V + HA+ + P+ RY G Sbjct: 18 YKHFFAAKNIDSRGKYVLISGCDTGFGHSLAIELDNLGFSVLAGVYSADNKETLTTKLSSRATVFKLDITNQQDIDVVFTLVKSKTSS-LHALVNNAGIANGGLIDWISLATIRQVMDVNFFGHVAMTKTFLPLLLTEPDSRVVNMSSAAGYLAAAGASAYSSSKYALEAFSDCLRREMAVWNLHVSIIEPGFMRTPIIEGMSEQMQKLWSNHV---------VNESK---ERWGDDYFSDWVREGSKMAKETADNPMKVVTAMCHAVTSSKPQIRYRPG 284
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: UPI000A2A7325 (retinol dehydrogenase 7-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7325) HSP 1 Score: 140 bits (352), Expect = 1.630e-35 Identity = 81/278 (29.14%), Postives = 148/278 (53.24%), Query Frame = 1 Query: 40 NLKNKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLTDEGTKRVQALGA--VTAIKCDLKDPRSIRQA-ATLALSVASADIWAVVHCAGLVKGGFLDFQPISNFREVMEVNFFGTVALNQLLMPAVKRAQGRVVFVSSVAGLVPFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDS-YSKEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEA--NQKLNESVCEDPIIVAKDIKHAIGAVHPRSRYLSGTFAK 855 + KNKF+L+TGCDSG G + L + H+I CLT EG + ++++ + + + ++ D + I + V IWAVV+ AG++ G +++ + +FR++ +VN +G + + + +P VK+A+GR+V ++SVAG++ + PY +KY +EA++ L+ E W + + + P A KTP+ D + K+ ++ +++ ND QE+ ++D F+ + +S P +V I A+ A P RY +G AK Sbjct: 35 DFKNKFVLITGCDSGFGRMSAIRL-DKMGFHVIGTCLTKEGKEXLESVXSDRLVGMLMNVTDSKQIHDVFVKVKXLVKEKGIWAVVNNAGILTVGPIEWYKMEDFRKMADVNLWGLIEVTKTFLPLVKKAEGRIVNLASVAGIICAGNMAPYNITKYGVEAFSDTLRREMKRWKVKVCIIEPQAFKTPLLDEVFGKKLQNLYDE-----------ANDEI--KQEYGERFIDDFLRGVFQKAFEKSTNPKPQLVVDAIXDAVAAKDPSLRYRAGQLAK 298
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Match: UPI0020195BEE (dehydrogenase/reductase SDR family member 9 n=2 Tax=Heteromyidae TaxID=10015 RepID=UPI0020195BEE) HSP 1 Score: 139 bits (349), Expect = 4.670e-35 Identity = 82/277 (29.60%), Postives = 154/277 (55.60%), Query Frame = 1 Query: 40 NLKNKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLTDEGTKRVQALGA--VTAIKCDLKDPRSIRQAATLALS-VASADIWAVVHCAGLVKG-GFLDFQPISNFREVMEVNFFGTVALNQLLMPAVKRAQGRVVFVSSVAGLVPFAGVGPYGCSKYAIEAYAGQLKLETGLWNIHIATVNPSAMKTPMTDSYSKEFRSTWEKMARADNTCDAYVNDSKDWMQEWDRGWLDRFVEANQKLNESVCEDPIIVAKDIKHAIGAVHPRSRYLSGTFAKT 858 N+ K+I +TGCD+G G + H+IA CLT+ G+ ++A + + + D+ DP ++ A + V +W +++ AG++ D+ + ++RE +EVN FG +++ ++P VK+AQGR+V VSS+AG + F G G Y SKYA+E + L+ + + +H++ + P KT ++D ++T +K+A + + S D Q++ G++++ +E ++ SV D +V + + HA+ ++ P++RY +G AKT Sbjct: 26 NITEKYIFITGCDTGFG-NLAARTFDKKGFHVIAACLTESGSTALKAETSERLRTVLLDVTDPEKVKSTAQWVKNHVGEKGLWGLINNAGILGALAPTDWLTVEDYREPIEVNLFGLISVTLNMLPLVKKAQGRIVNVSSIAGRLAFGG-GGYTLSKYAVEGFNDCLRRDMKAFGVHVSCIEPGLFKTHLSDP----IKTTEKKLA-------IWKHLSPDIKQQYGEGYIEKGLEQLKRATASVNMDLSLVVECMDHALTSLFPKTRYTAGKDAKT 289 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1060.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1060.2.1 >prot_H-akashiwo_Contig1060.2.1 ID=prot_H-akashiwo_Contig1060.2.1|Name=mRNA_H-akashiwo_Contig1060.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=320bp MLGYRHYRYGKKLNLKNKFILVTGCDSGIGLQTVQHLAEDSEVHIIAICLback to top mRNA from alignment at H-akashiwo_Contig1060:59129..60088+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1060.2.1 ID=mRNA_H-akashiwo_Contig1060.2.1|Name=mRNA_H-akashiwo_Contig1060.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=960bp|location=Sequence derived from alignment at H-akashiwo_Contig1060:59129..60088+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1060:59129..60088+ >mRNA_H-akashiwo_Contig1060.2.1 ID=mRNA_H-akashiwo_Contig1060.2.1|Name=mRNA_H-akashiwo_Contig1060.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=960bp|location=Sequence derived from alignment at H-akashiwo_Contig1060:59129..60088+ (Heterosigma akashiwo CCMP452)back to top |