mRNA_H-akashiwo_Contig1057.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1057.3.1
Unique NamemRNA_H-akashiwo_Contig1057.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: A0A6H5KSQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ9_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 2.060e-93
Identity = 173/372 (46.51%), Postives = 218/372 (58.60%), Query Frame = 1
Query:    1 SRLQPFDIRGREVWVKREDEFRL-DSGISGNKARKLFWLNQLPKQEFPKVVVSHGGHQ--------------SNAMLAIAAVCA-KFGSEFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKLSPPQLLAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEIARDTKERGWAPGEVAVVVPAGTGTTALFLARHLVPRGFHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLNFGEPNADLLEIWRELEDAGLFVDLLYAPRAWQVMFENWDNMEHPVL--------GRKKILYVHSGGLEGVSTQLTRYKHKGLI 1044
            S ++ F IRGR V VKR+D+ RL +SG+SGNKARKL+ LN+ P   FP+VV SHGG Q              SNAM+AIAAV A K GS F YY K  P+WLR NP GN+AR +ALG  ++E+   DY   FGG  G   P    +E   E     E +++PQGGA   A  G+++LADEI     E G    E+ V++PAGTGTTALFLARHLVP G  V  VPC GD  YL RQM  + R +           GV       G+         +P  V      K  FG P  +LLE+WRE++ AGLFVDLLYA  AW+V+ ++WD+   PV            +++YVH GGLEGVS+QLTRYKH+GL+
Sbjct:   32 SPVEEFVIRGRRVLVKRDDKMRLAESGLSGNKARKLYALNKTPASSFPEVVASHGGPQARDTRKHRARGYRISNAMVAIAAVVASKPGSSFVYYTKPVPKWLRRNPVGNFARTIALGAEIMEVHTEDYKRIFGGADG---PGASYSEVVPE-----EALFLPQGGADAAAEEGVSMLADEIIDYWDENGPPGKELRVILPAGTGTTALFLARHLVPEGIPVLTVPCAGDSGYLYRQMAKVDRASG----------GV-------GI---------FPQCVQETRKRKAAFGAPKRELLEVWREMDKAGLFVDLLYAAPAWEVIMDSWDSSGSPVSVTPGPPIDSEPQLMYVHCGGLEGVSSQLTRYKHQGLV 369          
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: A0A7S2DJY8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJY8_9STRA)

HSP 1 Score: 276 bits (705), Expect = 8.640e-87
Identity = 164/354 (46.33%), Postives = 206/354 (58.19%), Query Frame = 1
Query:    1 SRLQPFDIRGREVWVKREDEFRL-DSGISGNKARKLFWLNQLPKQEFPKVVVSHGGHQSNAMLAIAAVCAKF--GSEFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKLSPPQLLAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEI-ARDTKERGWAPGEVAVVVPAGTGTTALFLARHLVPRGFHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLNFGEPNADLLEIWRELEDAGLFVDLLYAPRAWQVMFENWD-NMEHPVLGR-KKILYVHSGGLEGVSTQLTRYKHKGLI 1044
            SR++  ++RGR ++VKR+D++RL ++G+ GNKARKL+ LN L    FP+ +VSHGG QSNAM+A+AAV  +    S F YY K  PRWLRNNPSGN+AR ++LGT +  L  A+Y D FGG       P  L    G  W       +PQGGA   A  GL  LADEI A+       A G V VVV +G+G TALFLARHL P G  V AVPCV  G    RQM  L   T                 G  G+           LP ++EG E + FG+P+  LL+ W E++  GL+VDLLY  R WQV+ E+WD     P LG    +LY H GG+EGVSTQL RYKH GL+
Sbjct:   58 SRVEAVEVRGRRIFVKRDDKYRLPETGLCGNKARKLYSLNNL--SPFPQDLVSHGGPQSNAMVALAAVVHRHQPSSTFTYYTKPIPRWLRNNPSGNFARAISLGTEIRTLSVAEYQDLFGGLGAISGAPPGLPLPPGALW-------VPQGGASAEAEPGLIRLADEIYAQVEASSELAGGPVNVVVASGSGATALFLARHLHPHGIGVTAVPCVMRGGAFLRQMERLDEMT-----------------GSHGI-----------LPSILEGKEHIPFGQPSPLLLDAWTEMKQIGLYVDLLYGARTWQVLLEHWDAGSMPPSLGPGTNVLYYHCGGIEGVSTQLNRYKHAGLV 374          
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: A0A835YPC9_9STRA (Tryptophan synthase beta subunit-like PLP-dependent enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPC9_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.920e-86
Identity = 174/406 (42.86%), Postives = 209/406 (51.48%), Query Frame = 1
Query:    1 SRLQPFDIRGREVWVKREDEFRLD-SGISGNKARKLFWLNQLPKQEFPKVVVSHGGHQSNAMLAIAAVCAKFGSEFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKLSPPQLLAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEIA----RDTKERGWAPGEVAVVVPAGTG---TTALFLARHLVPRG-FHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLN--------------------------FGEPNADLLEIWRELEDAGLFVDLLYAPRAWQVMFENWDNMEHPVLGR----------------------KKILYVHSGGLEGVSTQLTRYKHKGLID 1047
            S +  F IRGR V VKR+D+ RL  SGISGNKARKL+  N  P  + P +VVSHGG QSNAMLA+AAV    G  FRYY K   RWLR  PSGN+AR +AL T ++E+   DY   FGG  G    P      EG  W       +PQGGA   A AGL +LADEIA    + + ER     E+ VVVPAGTG   TTA FL RHL P G   VA VPCVG   YL RQM  +               G   E                PLP +++G   L+                          FG P A+LL +W+EL+D GLFVDLLYA RAW+V+FE W     P  G                       + ++YVH GGLEGVS+QLTRY+H GL++
Sbjct:    5 SPVDTFTIRGRTVLVKRDDKMRLKGSGISGNKARKLYTFNATPADQLPDLVVSHGGAQSNAMLALAAVATSKGKRFRYYTKAVGRWLRRTPSGNFARAMALNTEIIEVHAEDYASAFGGSDGPPRAPSPDICPEGAMW-------VPQGGACADAEAGLKMLADEIAEYWGQHSGEREGREKELVVVVPAGTGNGSTTAAFLNRHLRPHGNISVATVPCVGGADYLSRQMRRVL--------------GAPLE----------------PLPEILDGASALSSSTAAALNTGKRGAPSSLRKRSGTPVFGAPRAELLAVWQELKDLGLFVDLLYAARAWEVLFETWAADTSPSAGADAEGGGXXXXXXXXRGARLLEGRTLMYVHCGGLEGVSSQLTRYRHLGLLE 373          
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: A0A7S1TP75_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP75_9STRA)

HSP 1 Score: 265 bits (676), Expect = 3.940e-81
Identity = 160/387 (41.34%), Postives = 208/387 (53.75%), Query Frame = 1
Query:   22 IRGREVWVKREDEFRL-DSGISGNKARKLFWLNQLPKQEFPKVVVSHGGHQSNAMLAIAAVCAKF-----------------------------------GS----------EFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKLSPPQLLAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEIARDTKERGWAPGEVAVVVPAGTGTTALFLARHLVPRGFHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLNFGEPNADLLEIWRELEDAGLFVDLLYAPRAWQVMFENWDNMEHPVLGRKKILYVHSGGLEGVSTQLTRYKHKGLI 1044
            IRG  V VKR+D+ RL DSG+ GNK RKL+WLN   +Q+FP  + S GG QSNAM+A+AAV  K+                                   GS           F Y++KK PRWLR+ PSGN+AR  ALG  + EL   DY  YFGG +G          +E E     + +++PQGGA+  A  GL +LA EI     ERG A  ++ V VPAGTGTTAL+LARHL      V A+ C G  SY   Q+ AL R T                          A      +P V+ G + + FGEP A+LL+IW EL+DAG++ DL YAPRAWQ++F+NW++      G + ++YVH+GGLEGVSTQLTRY+  G +
Sbjct:  121 IRGAPVLVKRDDQLRLLDSGVFGNKGRKLWWLNSRTEQQFPASLASFGGPQSNAMVALAAVADKYRRAAVARENATXXXXXXXXXXXXXXXXXXXXXXXSGSVRGENHPGEPSFHYFMKKLPRWLRSYPSGNFARAKALGMTIHELSPQDYKWYFGGKAGSA----FKIPEELEKMVPRDTLWVPQGGAMFEAEPGLKILAQEIESYWAERGAANEKLTVAVPAGTGTTALYLARHLASESIRVVALSCCGPVSYTDAQVRALDRVTR-------------------------AAGAPRAIPEVMGGAQNVPFGEPRAELLDIWYELQDAGVYCDLTYAPRAWQILFDNWEDPAFHGDGHR-LMYVHTGGLEGVSTQLTRYRRAGFL 477          
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: A0A7S2SJY6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJY6_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.430e-72
Identity = 153/359 (42.62%), Postives = 191/359 (53.20%), Query Frame = 1
Query:   22 IRGREVWVKREDEFRLDS-GISGNKARKLFWLNQLPKQEFPKVVVSHGGHQSNAMLAIAAVCAKFGSEFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKLSPPQLLAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEIARDTKE-------RGWAPGEVA--------VVVPAGTGTTALFLARHLVPRGFHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLN-FGEPNADLLEIWRELED-AGLFVDLLYAPRAWQVMFENWDNMEHPVLGRKKILYVHSGGLEGVSTQLTRYKHKGLI 1044
            +R R + VKR+D  RL   G+SGNKARKL  LN+      P  + SHGG QSNAMLA+AAV    G  F Y+ K  PRWLR NPSGN+ R  ALG  + +L    Y   FGG  G    PQ L   E       E +++PQGGA   A  G A+LA EI  + +        R    GE A        VVV AGTGTTALFLAR L P    V AVPC+G  +YL+RQM  L  +T           GV       G+            P V+E       FG+P   LL +W  L D A L VDL+Y  RAW+V+F++W ++  P+ G + I+Y H GGLEG S+QL RYK +GL+
Sbjct:   49 VRNRRILVKRDDLCRLAGCGVSGNKARKLLTLNRASSDAIPDTIASHGGPQSNAMLALAAVANFKGKRFIYFTKSLPRWLRQNPSGNFLRATALGMELRQLSPTKYQQLFGGADGIAEQPQDLDLPE-------EALWVPQGGATIDAELGCAVLAKEIHEEWRTSDAFAQFREPLNGENADGRQQRLCVVVAAGTGTTALFLARWLTPLNISVVAVPCLGSPAYLQRQMEKLDEQTG----------GV-------GI-----------FPHVLEPPRGSRPFGKPRKGLLSVWNYLRDSATLTVDLIYGARAWEVLFDSWKDLPPPLSGAQ-IIYYHCGGLEGTSSQLARYKREGLL 371          
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: R1FIR6_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FIR6_EMIHU)

HSP 1 Score: 234 bits (596), Expect = 4.680e-71
Identity = 148/354 (41.81%), Postives = 192/354 (54.24%), Query Frame = 1
Query:    1 SRLQPFDIRGREVWVKREDEFRLDSGISGNKARKLFWLNQLPKQEFPKVVVSHGGHQSNAMLAIAAVCAKFGSEFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKLS-----PPQLLAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEIARDTKERGWAP--GEVAVVVPAGTGTTALFLARHLVPRG-FHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLNFGEPNADLLEIWRELEDAGLFVDLLYAPRAWQVMFENWDNMEHPVLGRKKILYVHSGGLEGVSTQLTRYKHKG 1038
            S ++ F +RG ++ VKR+D   L SG+SGNKARKL  L  +     P ++ S GGHQSNAM A+AAV    G+ F Y+ K  PRWL   PSGN  R L+LG  ++EL +A+Y   FG   G L      PP  L   E         +++PQGGA   A  G+A LA E+        W P  G + +VVPAGTGTTALFLARHL       V AVPCVGDG Y+  QM+AL R T                GG  G      ++   P  + + G    +FG  + + L +W+E   AGL VDLLYAP A +V+F+   + E    G    LY+H+GGLEGV +QL RY+  G
Sbjct:   17 SPIEAFSLRGTQLLVKRDDRLALGSGVSGNKARKLLALEAMSPG--PSLIGSFGGHQSNAMAALAAVADAHGARFLYFTKPLPRWLAAAPSGNLERALSLGMELVELADAEYASLFGAGGGVLPAVAPRPPAALLPPEA--------LWLPQGGAAALAEPGVATLAREV-----REWWQPRSGRLDLVVPAGTGTTALFLARHLSQTSAVTVWAVPCVGDGDYIEAQMLALDRCT----------------GGAVGT-----NRKALPRTLAMPGGAAHHFGALDGEELAMWQEAARAGLDVDLLYAPHALRVLFDTLLSHERAGEGDATTLYLHTGGLEGVESQLRRYRRAG 334          
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: A0A7S0GYQ1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GYQ1_9EUKA)

HSP 1 Score: 235 bits (599), Expect = 8.590e-71
Identity = 152/371 (40.97%), Postives = 201/371 (54.18%), Query Frame = 1
Query:    1 SRLQPFDIRGREVWVKREDEFRLD-SGISGNKARKLFWLNQLPKQEFPKVVVSHGGHQSNAMLAIAAVCAKFGSEFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKL----SPPQL-----LAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEIARDTKERGWAPGEVA-VVVPAGTGTTALFLARHLVPR--------GFHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLNFGEPNADLLEIWRELEDAGLFVDLLYAPRAWQVMFENWDNMEHPVLGRKKILYVHSGGLEGVSTQLTRYKHKGLIDPKE 1056
            S ++ F IRGR V+VKR+D  RL  SGISGNKARKL  L+ +P  EFP ++ SHGG QSNAMLA+A +    GS+F+Y  K  P+ L+ NPSGNY   L++ T+   L  +DY+ YFG  +  +    +PP +     L   E   W       IPQGGA   A  G+  LADEI       G   GE   VV+PAGTGTTALFLAR L  R           V AVPCVG   YL+ QM AL   +                GGE         K+    P +++   +  F  P+  L  IW +L+ AGL VDL+YAP +W+ +F++W+ +         +LYVH+GGLEGVS+ L RY+ +  I P +
Sbjct:   61 SPVELFSIRGRNVYVKRDDLLRLPGSGISGNKARKLASLDAIPASEFPSIMASHGGIQSNAMLAMAKLAKAKGSKFKYITKSIPKHLKANPSGNYKEALSMDTQFDSLKPSDYDTYFGLSAPAIERGATPPCIPGLDYLRATENLLW-------IPQGGACAVAEDGVCGLADEIWNWWIIHGVPSGETLNVVLPAGTGTTALFLARSLARRQNLDGTRTDVRVFAVPCVGSADYLKAQMTALDNAS----------------GGE---------KI---FPRILKPKTRRQFATPHESLYTIWEQLKKAGLDVDLVYAPPSWEALFDSWNEV---FTSNSTVLYVHTGGLEGVSSMLHRYQREKKIPPSD 393          
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: A0A7S4CGT2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CGT2_9EUGL)

HSP 1 Score: 231 bits (588), Expect = 7.670e-69
Identity = 148/350 (42.29%), Postives = 195/350 (55.71%), Query Frame = 1
Query:    1 SRLQPFDIRGREVWVKREDEFRLD-SGISGNKARKLFWLNQLPKQEFPKVVVSHGGHQSNAMLAIAAVCAKFGSEFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKLSPPQLLAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEIA---RDTKERGWAPGEVAVVVPAGTGTTALFLARHLVPRGFHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLNFGEPNADLLEIWRELEDAGLFVDLLYAPRAWQVMFENWDNMEHPVLGRKKILYVHSGGLEGVSTQLTRYKHKG 1038
            S +  F +RG +++VKR+D+ RL  + +SGNKARK++ L++    + P+++VS+GG QSNAMLA+A V    G    Y+ K  PRWLR  PSGNYA  LALG  +  + +  Y  +         P QL+ E  G  W       IPQGGA   A  G+  LA EI    RD +E         VV+PAGTGTTALFLARHL      V A+PCVGD  YL++QM   +R  A          G R+E                  P +++      FG P+  LLE+W  +  AGL VDLLYAPRAW+V+ +  D  +H ++  KKILYVHSGGLEGV T L RY+ +G
Sbjct:  114 SGVDAFTVRGHKIFVKRDDQLRLPGTNLSGNKARKMYALHRWGPGQVPRMLVSYGGAQSNAMLALALVAKAKGVPLTYFTKPIPRWLRETPSGNYAEALALGANITAVSSELYKSF----EQTGCPTQLVPE--GSLW-------IPQGGACALAEPGVQNLASEIKDWLRDVQEF---EDPFCVVLPAGTGTTALFLARHLEGVAA-VVAIPCVGDAEYLQQQM---SRVDAA--------SGDRRE-----------------FPAILDMPPTRPFGVPDPALLEVWETVRAAGLEVDLLYAPRAWEVLLQACD-AQHRLVRGKKILYVHSGGLEGVGTMLARYRRQG 417          
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: A0A7S4E2R7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2R7_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.730e-66
Identity = 146/357 (40.90%), Postives = 182/357 (50.98%), Query Frame = 1
Query:    1 SRLQPFDIRGREVWVKREDEFRLD---SGISGNKARKLFWLNQLPKQEF--PKVVVSHGGHQSNAMLAIAAVCAKFGSEFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKLSPPQLLAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEIARDTKERGWAPGEVAVVVPAGTGTTALFLARHLVPRGFHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLNFGEPNADLLEIWRELEDAGLFVDLLYAPRAWQVMFENWDNMEHPVLGRKKILYVHSGGLEGVSTQLTRYKHKGLIDPKE 1056
            S LQPF +RGR V VKR+D + L    SG++GNKARKL+ L    K+ F   + V S GGHQSNA   IAA+C  F   F +  K  PRWLR NP+GNYAR LALG  ++ L   DY      P  +     LL +  G      E  ++PQG A   A AG+A+LA E+  D KE         VVVPAGTGTTALFLARHL      V A PC      L+RQM  L             +D     G                 P ++ G     FG P+  +L  WREL  +GL VDL+YAP A++ + +  D+            YVH GG  GV+TQL RY+H GL+  KE
Sbjct:   24 SPLQPFTVRGRSVLVKRDDRYALPGVLSGVAGNKARKLYGLY---KRGFGDAEAVASLGGHQSNAFPCIAALCRAFDLPFYFVCKPVPRWLRQNPAGNYARALALGAELVPLKPDDYRRCIADPEWRAD---LLKDVAGVS----EVAWVPQGAASRDAEAGVAMLAAELVDDLKEY----ANARVVVPAGTGTTALFLARHLRDADVEVCAAPCATSSIELKRQMTLL-------------DDASGSIGA---------------FPTIL-GAPPYRFGAPDKRVLATWRELAASGLHVDLVYAPAAFETLLQTVDDRPQ--------CYVHCGGNAGVATQLNRYRHAGLLGVKE 329          
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Match: R1DYP1_EMIHU (Selenoprotein O n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DYP1_EMIHU)

HSP 1 Score: 234 bits (596), Expect = 3.990e-66
Identity = 148/354 (41.81%), Postives = 192/354 (54.24%), Query Frame = 1
Query:    1 SRLQPFDIRGREVWVKREDEFRLDSGISGNKARKLFWLNQLPKQEFPKVVVSHGGHQSNAMLAIAAVCAKFGSEFRYYVKKTPRWLRNNPSGNYARVLALGTRMLELDNADYNDYFGGPSGKLS-----PPQLLAEKEGEYWDDGEGIYIPQGGALPGASAGLALLADEIARDTKERGWAP--GEVAVVVPAGTGTTALFLARHLVPRG-FHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGLQWQEAHKLQYPLPVVIEGTEKLNFGEPNADLLEIWRELEDAGLFVDLLYAPRAWQVMFENWDNMEHPVLGRKKILYVHSGGLEGVSTQLTRYKHKG 1038
            S ++ F +RG ++ VKR+D   L SG+SGNKARKL  L  +     P ++ S GGHQSNAM A+AAV    G+ F Y+ K  PRWL   PSGN  R L+LG  ++EL +A+Y   FG   G L      PP  L   E         +++PQGGA   A  G+A LA E+        W P  G + +VVPAGTGTTALFLARHL       V AVPCVGDG Y+  QM+AL R T                GG  G      ++   P  + + G    +FG  + + L +W+E   AGL VDLLYAP A +V+F+   + E    G    LY+H+GGLEGV +QL RY+  G
Sbjct:   17 SPIEAFSLRGTQLLVKRDDRLALGSGVSGNKARKLLALEAMSPG--PSLIGSFGGHQSNAMAALAAVADAHGARFLYFTKPLPRWLAAAPSGNLERALSLGMELVELADAEYASLFGAGGGVLPAVAPRPPAALLPPEA--------LWLPQGGAAALAEPGVATLAREV-----REWWQPRSGRLDLVVPAGTGTTALFLARHLSQTSAVTVWAVPCVGDGDYIEAQMLALDRCT----------------GGAVGT-----NRKALPRTLAMPGGAAHHFGALDGEELAMWQEAARAGLDVDLLYAPHALRVLFDTLLSHERAGEGDATTLYLHTGGLEGVESQLRRYRRAG 334          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1057.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSQ9_9PHAE2.060e-9346.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2DJY8_9STRA8.640e-8746.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835YPC9_9STRA1.920e-8642.86Tryptophan synthase beta subunit-like PLP-dependen... [more]
A0A7S1TP75_9STRA3.940e-8141.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SJY6_9STRA1.430e-7242.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
R1FIR6_EMIHU4.680e-7141.81Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S0GYQ1_9EUKA8.590e-7140.97Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S4CGT2_9EUGL7.670e-6942.29Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4E2R7_9STRA1.730e-6640.90Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
R1DYP1_EMIHU3.990e-6641.81Selenoprotein O n=1 Tax=Emiliania huxleyi TaxID=29... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1057contigH-akashiwo_Contig1057:47544..48611 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2903.EOD35441
PFAMsPALP
Model size1068
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.66e-72
EggNOG OGsCOG2515@1|root,2RXQ8@2759|Eukaryota
Description1-aminocyclopropane-1-carboxylate deaminase activity
Cds size1068
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387065.0686736-CDS-H-akashiwo_Contig1057:47543..486111681387065.0686736-CDS-H-akashiwo_Contig1057:47543..48611Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1057 47544..48611 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1057.3.1prot_H-akashiwo_Contig1057.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1057 47544..48611 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1057.3.1

>prot_H-akashiwo_Contig1057.3.1 ID=prot_H-akashiwo_Contig1057.3.1|Name=mRNA_H-akashiwo_Contig1057.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=356bp
SRLQPFDIRGREVWVKREDEFRLDSGISGNKARKLFWLNQLPKQEFPKVV
VSHGGHQSNAMLAIAAVCAKFGSEFRYYVKKTPRWLRNNPSGNYARVLAL
GTRMLELDNADYNDYFGGPSGKLSPPQLLAEKEGEYWDDGEGIYIPQGGA
LPGASAGLALLADEIARDTKERGWAPGEVAVVVPAGTGTTALFLARHLVP
RGFHVAAVPCVGDGSYLRRQMVALARETALQEEEEMEEDGVRKEGGEEGL
QWQEAHKLQYPLPVVIEGTEKLNFGEPNADLLEIWRELEDAGLFVDLLYA
PRAWQVMFENWDNMEHPVLGRKKILYVHSGGLEGVSTQLTRYKHKGLIDP
KEAMG*
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mRNA from alignment at H-akashiwo_Contig1057:47544..48611-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1057.3.1 ID=mRNA_H-akashiwo_Contig1057.3.1|Name=mRNA_H-akashiwo_Contig1057.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1068bp|location=Sequence derived from alignment at H-akashiwo_Contig1057:47544..48611- (Heterosigma akashiwo CCMP452)
TCTAGGCTTCAACCTTTTGATATCAGAGGTCGCGAGGTTTGGGTTAAGCG AGAAGATGAATTTCGACTCGATAGTGGGATATCAGGAAATAAAGCCCGGA AGCTTTTTTGGCTGAACCAGCTTCCCAAGCAAGAGTTCCCCAAAGTTGTT GTCAGCCATGGCGGTCACCAAAGTAATGCAATGCTTGCCATTGCTGCTGT CTGCGCCAAGTTTGGATCAGAGTTCAGATATTATGTCAAAAAGACCCCTC GGTGGCTACGCAACAATCCTAGTGGTAATTATGCTCGAGTTCTTGCTCTT GGAACCAGAATGCTTGAGCTTGACAATGCCGACTATAATGACTATTTTGG AGGACCCAGCGGTAAGTTAAGCCCTCCTCAACTCTTGGCCGAAAAAGAAG GAGAATATTGGGACGACGGGGAGGGGATTTACATCCCTCAAGGCGGAGCG TTGCCTGGGGCCTCTGCTGGCCTGGCGTTACTTGCGGACGAGATCGCAAG GGACACAAAAGAGCGTGGCTGGGCCCCGGGCGAGGTGGCGGTCGTGGTGC CGGCGGGCACGGGAACCACTGCGCTCTTCCTGGCGCGGCACCTGGTTCCC CGGGGCTTCCATGTGGCGGCAGTGCCCTGCGTGGGTGACGGGTCTTACCT GCGCCGCCAGATGGTGGCCCTCGCCCGAGAGACTGCTCTCCAGGAAGAAG AAGAAATGGAGGAGGACGGAGTCAGAAAGGAGGGGGGAGAGGAGGGGTTG CAGTGGCAAGAGGCGCACAAGCTCCAGTACCCGCTTCCTGTAGTGATCGA GGGTACCGAGAAACTGAATTTTGGGGAGCCCAACGCCGACCTCCTCGAGA TATGGCGCGAGCTGGAAGATGCTGGGCTTTTTGTTGATCTTTTGTATGCG CCAAGGGCGTGGCAAGTGATGTTTGAAAACTGGGACAACATGGAACACCC TGTGCTTGGAAGGAAGAAAATTTTGTATGTCCACTCGGGGGGATTAGAAG GTGTGTCAACACAGCTCACAAGGTACAAGCATAAGGGTTTGATTGACCCA AAAGAAGCAATGGGATAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1057:47544..48611-

>mRNA_H-akashiwo_Contig1057.3.1 ID=mRNA_H-akashiwo_Contig1057.3.1|Name=mRNA_H-akashiwo_Contig1057.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1068bp|location=Sequence derived from alignment at H-akashiwo_Contig1057:47544..48611- (Heterosigma akashiwo CCMP452)
TCTAGGCTTCAACCTTTTGATATCAGAGGTCGCGAGGTTTGGGTTAAGCG
AGAAGATGAATTTCGACTCGATAGTGGGATATCAGGAAATAAAGCCCGGA
AGCTTTTTTGGCTGAACCAGCTTCCCAAGCAAGAGTTCCCCAAAGTTGTT
GTCAGCCATGGCGGTCACCAAAGTAATGCAATGCTTGCCATTGCTGCTGT
CTGCGCCAAGTTTGGATCAGAGTTCAGATATTATGTCAAAAAGACCCCTC
GGTGGCTACGCAACAATCCTAGTGGTAATTATGCTCGAGTTCTTGCTCTT
GGAACCAGAATGCTTGAGCTTGACAATGCCGACTATAATGACTATTTTGG
AGGACCCAGCGGTAAGTTAAGCCCTCCTCAACTCTTGGCCGAAAAAGAAG
GAGAATATTGGGACGACGGGGAGGGGATTTACATCCCTCAAGGCGGAGCG
TTGCCTGGGGCCTCTGCTGGCCTGGCGTTACTTGCGGACGAGATCGCAAG
GGACACAAAAGAGCGTGGCTGGGCCCCGGGCGAGGTGGCGGTCGTGGTGC
CGGCGGGCACGGGAACCACTGCGCTCTTCCTGGCGCGGCACCTGGTTCCC
CGGGGCTTCCATGTGGCGGCAGTGCCCTGCGTGGGTGACGGGTCTTACCT
GCGCCGCCAGATGGTGGCCCTCGCCCGAGAGACTGCTCTCCAGGAAGAAG
AAGAAATGGAGGAGGACGGAGTCAGAAAGGAGGGGGGAGAGGAGGGGTTG
CAGTGGCAAGAGGCGCACAAGCTCCAGTACCCGCTTCCTGTAGTGATCGA
GGGTACCGAGAAACTGAATTTTGGGGAGCCCAACGCCGACCTCCTCGAGA
TATGGCGCGAGCTGGAAGATGCTGGGCTTTTTGTTGATCTTTTGTATGCG
CCAAGGGCGTGGCAAGTGATGTTTGAAAACTGGGACAACATGGAACACCC
TGTGCTTGGAAGGAAGAAAATTTTGTATGTCCACTCGGGGGGATTAGAAG
GTGTGTCAACACAGCTCACAAGGTACAAGCATAAGGGTTTGATTGACCCA
AAAGAAGCAATGGGATAA
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