mRNA_H-akashiwo_Contig1054.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: D8SX50_SELML (S5A_REDUCTASE domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SX50_SELML) HSP 1 Score: 85.1 bits (209), Expect = 2.950e-18 Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 3 Query: 9 LSMLCILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 ++MLC+ GIS ACIAD QL+ F+ NK R E G V +L+ GLW++SRHPNYFGEQLW Sbjct: 198 IAMLCVAGISIACIADTQLHSFVSSNKLRRERGAQPVAVLDEGLWRYSRHPNYFGEQLW 256
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: A0A8J9RZH3_9CHLO (Uncharacterized protein C594.04c n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RZH3_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 3.070e-18 Identity = 34/55 (61.82%), Postives = 44/55 (80.00%), Query Frame = 3 Query: 21 CILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 C+LGI A +AD QL+ F+ N+RR G+P VL+L+TGLW++SRHPNYFGEQLW Sbjct: 204 CLLGIGIAAVADTQLHEFVTANERRQAAGKPPVLILDTGLWRYSRHPNYFGEQLW 258
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: D8T6T5_SELML (S5A_REDUCTASE domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T6T5_SELML) HSP 1 Score: 84.0 bits (206), Expect = 7.630e-18 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 9 LSMLCILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 ++MLC+ GIS ACIAD QL+ F+ NK R E G V +L+ GLW +SRHPNYFGEQLW Sbjct: 194 IAMLCVAGISIACIADTQLHSFVSNNKLRRERGAQPVAVLDEGLWHYSRHPNYFGEQLW 252
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: I0YY04_COCSC (DUF1295-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YY04_COCSC) HSP 1 Score: 79.3 bits (194), Expect = 2.010e-16 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 3 Query: 21 CILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 C+LGI A +AD QL+ F+ N++R G+ VLLL TGLW++SRHPNYFGEQLW Sbjct: 139 CLLGIGVAAVADTQLHNFVTANEQRRAAGKLPVLLLNTGLWRYSRHPNYFGEQLW 193
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: A0A7J7MPF1_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MPF1_9MAGN) HSP 1 Score: 80.1 bits (196), Expect = 4.170e-16 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 3 AVLSMLCILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 +V + +C+ GI FA AD QL+ F+ N++R E G PK+L LE GLW++SRHPNY GEQLW Sbjct: 381 SVATTICMFGIIFAYFADTQLHEFVSSNEKRKELGVPKLLTLEKGLWRYSRHPNYVGEQLW 441
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: J3LV61_ORYBR (S5A_REDUCTASE domain-containing protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3LV61_ORYBR) HSP 1 Score: 76.6 bits (187), Expect = 5.720e-16 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 3 Query: 21 CILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 C+ GI+ A AD QL+RF+ N++ + G+P V LE GLW++SRHPNYFGEQLW Sbjct: 53 CVAGIAIAHFADTQLHRFVATNEKLKKVGEPTVATLEEGLWRYSRHPNYFGEQLW 107
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: A0A0P0W6E9_ORYSJ (Os04g0105300 protein (Fragment) n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0W6E9_ORYSJ) HSP 1 Score: 78.2 bits (191), Expect = 7.630e-16 Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 6 VLSMLCILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 V +M C+ GI A AD QL+RF+ N++ + G+P VL +E GLW++SRHPNYFGEQLW Sbjct: 142 VATMACLAGIVIAHFADTQLHRFVTTNEKLKKVGEPTVLTMEAGLWRYSRHPNYFGEQLW 201
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: A0A2P6SJ17_ROSCH (S5A_REDUCTASE domain-containing protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SJ17_ROSCH) HSP 1 Score: 78.6 bits (192), Expect = 8.410e-16 Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 3 Query: 15 MLCILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 M+CI GI+ A AD QLY F +NK+ G+P V+ L+ GLW++SRHPNYFGEQLW Sbjct: 202 MICISGIAIAYYADTQLYNFASKNKKLKALGEPVVVTLDEGLWRYSRHPNYFGEQLW 258
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: D8U8V8_VOLCA (S5A_REDUCTASE domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8V8_VOLCA) HSP 1 Score: 77.8 bits (190), Expect = 1.160e-15 Identity = 33/52 (63.46%), Postives = 43/52 (82.69%), Query Frame = 3 Query: 30 GISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 GI A IADNQL FM EN++R + G+ ++LLL+TGLW++SRHPN+FGEQLW Sbjct: 176 GIMVALIADNQLRDFMVENEKRAQEGRVRLLLLDTGLWRYSRHPNFFGEQLW 227
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Match: A0A7S2V7U5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7U5_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.270e-15 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 18 LCILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNYFGEQLW 185 LC+ GI A AD L+ F+ N RR E G+PKVLLL +GLWK+SRHPNYFGEQLW Sbjct: 218 LCLAGIICAYHADTTLHEFVIANARRKEEGKPKVLLLCSGLWKYSRHPNYFGEQLW 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1054.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1054.4.1 >prot_H-akashiwo_Contig1054.4.1 ID=prot_H-akashiwo_Contig1054.4.1|Name=mRNA_H-akashiwo_Contig1054.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=57bp MLCILGISFACIADNQLYRFMEENKRRLETGQPKVLLLETGLWKFSRHPNback to top mRNA from alignment at H-akashiwo_Contig1054:219388..224722- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1054.4.1 ID=mRNA_H-akashiwo_Contig1054.4.1|Name=mRNA_H-akashiwo_Contig1054.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=5335bp|location=Sequence derived from alignment at H-akashiwo_Contig1054:219388..224722- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1054:219388..224722- >mRNA_H-akashiwo_Contig1054.4.1 ID=mRNA_H-akashiwo_Contig1054.4.1|Name=mRNA_H-akashiwo_Contig1054.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=171bp|location=Sequence derived from alignment at H-akashiwo_Contig1054:219388..224722- (Heterosigma akashiwo CCMP452)back to top |