mRNA_H-akashiwo_Contig1052.9.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1052.9.1
Unique NamemRNA_H-akashiwo_Contig1052.9.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A151IS59_9HYME (GIY-YIG domain-containing protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151IS59_9HYME)

HSP 1 Score: 83.2 bits (204), Expect = 4.480e-17
Identity = 47/134 (35.07%), Postives = 71/134 (52.99%), Query Frame = 1
Query:   13 EFEASLQENGQLGNLLAPRRPSTGGMQQKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFDFDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQKGRD 414
            +   S     +L   + P++     +QQKNV+YKI+CK C+ SYVGQTKRTL TRVK+H   +  +  +L V         L  H L+   +H FD+D+ +V+  E    KR   E ++  +  N+ N+Q   D
Sbjct:   67 DVNLSFYSLNKLNCFIGPQKDRLSNLQQKNVIYKINCKDCDASYVGQTKRTLKTRVKEHKNDIRKSNGNLSV---------LSEHRLE--LNHEFDWDDVKVVDSERWLYKRRISEMLHIKLQNNSLNLQSDTD 189          
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A151IWB9_9HYME (GIY-YIG domain-containing protein (Fragment) n=2 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151IWB9_9HYME)

HSP 1 Score: 81.6 bits (200), Expect = 4.910e-17
Identity = 46/134 (34.33%), Postives = 71/134 (52.99%), Query Frame = 1
Query:   13 EFEASLQENGQLGNLLAPRRPSTGGMQQKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFDFDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQKGRD 414
            +   S     +L   + P++     +Q+KNV+YKI+CK C+ SYVGQTKRTL TRVK+H   +  +  +L V         L  H L+   +H FD+D+ +V+  E    KR   E ++  +  N+ N+Q   D
Sbjct:   10 DVNLSFYSFNKLNCFIGPQKDRLSNLQKKNVIYKINCKDCDASYVGQTKRTLKTRVKEHKNDIRKSNGNLSV---------LSEHRLE--LNHEFDWDDVKVVDSERWLYKRRISEMLHIKLQNNSLNLQSDTD 132          
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A151JCH7_9HYME (GIY-YIG domain-containing protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151JCH7_9HYME)

HSP 1 Score: 83.2 bits (204), Expect = 1.720e-16
Identity = 47/134 (35.07%), Postives = 71/134 (52.99%), Query Frame = 1
Query:   13 EFEASLQENGQLGNLLAPRRPSTGGMQQKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFDFDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQKGRD 414
            +   S     +L   + P++     +QQKNV+YKI+CK C+ SYVGQTKRTL TRVK+H   +  +  +L V         L  H L+   +H FD+D+ +V+  E    KR   E ++  +  N+ N+Q   D
Sbjct:  147 DVNLSFYSLNKLNCFIGPQKDRLSNLQQKNVIYKINCKDCDASYVGQTKRTLKTRVKEHKNDIRKSNGNLSV---------LSEHRLE--LNHEFDWDDVKVVDSERWLYKRRISEMLHIKLQNNSLNLQSDTD 269          
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A151JBG7_9HYME (Uncharacterized protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151JBG7_9HYME)

HSP 1 Score: 82.0 bits (201), Expect = 1.560e-15
Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 1
Query:   16 FEASLQENGQLGNLLAPRRPSTGGMQQKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFDFDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQKGRD 414
            F   ++   +L   +   +  T  M + NVVYK++CK CE SYVGQTKR L+TRVK+H  ++    ++  V         L  H L+  F+H FD+ N  V+  E+H+ KRL  E ++     N  N QK  +
Sbjct:  273 FTIGIRCMNKLNRFVKVHKDKTDTMSKNNVVYKVTCKDCEASYVGQTKRKLSTRVKEHEYNIRENPSNYSV---------LTNHMLE--FNHSFDWKNVRVMDIESHYNKRLISEMLFIKEQHNDINAQKDTE 394          
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A151JBS6_9HYME (GIY-YIG domain-containing protein (Fragment) n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151JBS6_9HYME)

HSP 1 Score: 77.0 bits (188), Expect = 9.890e-15
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1
Query:   94 QKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFDFDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQ 402
            +KNVVYKISCK CE SYVGQTKR L TR+ +H            ++R   N + +  H ++  F H FD++N  VL  E    KRL  E ++  M +N+ N++
Sbjct:   93 RKNVVYKISCKSCEASYVGQTKRKLKTRLAEHRN---------HINRNSNNQSVITEHRIE--FDHDFDWENVAVLDEERSLNKRLISECLHILMQKNSLNLR 184          
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A026WQN8_OOCBI (GIY-YIG domain-containing protein (Fragment) n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WQN8_OOCBI)

HSP 1 Score: 75.1 bits (183), Expect = 1.310e-14
Identity = 47/130 (36.15%), Postives = 64/130 (49.23%), Query Frame = 1
Query:   13 EFEASLQENGQLGNLLAPRRPSTGGMQQKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFDFDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQ 402
            +FE + +    L   +   +     M + NVVYKISC  CEVSYVGQTKR L TRVK+H   ++    S  V         + AH L+  F H F++   +VL  ET + KRL  E +         N+Q
Sbjct:    4 DFEMAYRPIHSLRRFIGTGKDMINKMSRCNVVYKISCNDCEVSYVGQTKRRLGTRVKEHKNDINKRSGSPSV---------ISAHRLE--FGHEFEWKKVQVLDEETSYRKRLISEMVNIKKQNKPLNLQ 122          
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A151JLZ4_9HYME (GIY-YIG domain-containing protein (Fragment) n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151JLZ4_9HYME)

HSP 1 Score: 77.8 bits (190), Expect = 1.630e-14
Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 1
Query:   22 ASLQENGQLGNLLAPRRPSTGGMQQKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFDFDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQKGRD 414
            +S     +L   + P++     +Q+KNV+YKI+C+ C+ SYVGQTKRTL T VK+H+  +  ++ +L V         L  H L+   +H FD+D+ EV+  E    +R   E ++  +  N  N+Q   D
Sbjct:  143 SSFYSLNKLNCFIRPQKDRLSNLQKKNVIYKINCRDCDASYVGQTKRTLKTSVKEHNNDIRKSEGNLSV---------LSEHHLE--LNHEFDWDDVEVVYSERWLYRRRITEMLHIKLQNNGLNLQSDTD 262          
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A151IAU7_9HYME (GIY-YIG domain-containing protein (Fragment) n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151IAU7_9HYME)

HSP 1 Score: 77.4 bits (189), Expect = 2.720e-14
Identity = 46/134 (34.33%), Postives = 70/134 (52.24%), Query Frame = 1
Query:   16 FEASLQENGQLGNLLAPRRPSTGGMQQKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFDFDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQKGRDL 417
            F+ + +   +L  ++  ++     M   NVVYKISC  C+ +YVGQTKRTL TR+ +H   ++       V         +  H L+  FSH FD+DN E+L  E +  KRL  E ++    +N+ N+Q   DL
Sbjct:  158 FKLAYKGINRLDRIVKVQKDKLQTMLHSNVVYKISCGDCDATYVGQTKRTLKTRITEHRNHINWNTQQKSV---------ITEHRLN--FSHEFDWDNVEILDEEINLNKRLISEMLHIHRQKNSLNVQTDTDL 280          
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A151JB04_9HYME (GIY-YIG domain-containing protein (Fragment) n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151JB04_9HYME)

HSP 1 Score: 76.6 bits (187), Expect = 2.940e-14
Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 1
Query:   94 QKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFDFDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQ 402
            +KNVVYKI+CK C  SYVGQT R L TR+ +H   ++         RK  N + +  H L   F H FD+ N E+L  E ++GKR+  E +   M +N  N++
Sbjct:  138 RKNVVYKINCKDCNASYVGQTSRKLKTRINEHKNDIN---------RKNGNMSVISEHRLQ--FQHEFDWSNTEILDDERYYGKRMVSEMLNIKMQDNGLNLK 229          
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Match: A0A151JPB2_9HYME (GIY-YIG domain-containing protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151JPB2_9HYME)

HSP 1 Score: 77.0 bits (188), Expect = 3.000e-14
Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   88 MQQKNVVYKISCKQCEVSYVGQTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLD--TDFSHRFDFDNAEVLCRETHWGKRLKKEAIY 369
            +  +N+VYKISCK C+ SYVGQTKR L+TR+K+H   +             +N+TG P+   D    F H F +D A++L  E  +GKRL  E IY
Sbjct:  159 LSNQNIVYKISCKNCDASYVGQTKRKLSTRLKEHQSDI-------------RNNTGSPSVITDHRVTFDHNFKWDEAKILDNEASYGKRLVSEMIY 241          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1052.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151IS59_9HYME4.480e-1735.07GIY-YIG domain-containing protein n=1 Tax=Trachymy... [more]
A0A151IWB9_9HYME4.910e-1734.33GIY-YIG domain-containing protein (Fragment) n=2 T... [more]
A0A151JCH7_9HYME1.720e-1635.07GIY-YIG domain-containing protein n=1 Tax=Trachymy... [more]
A0A151JBG7_9HYME1.560e-1535.34Uncharacterized protein n=1 Tax=Trachymyrmex corne... [more]
A0A151JBS6_9HYME9.890e-1540.78GIY-YIG domain-containing protein (Fragment) n=1 T... [more]
A0A026WQN8_OOCBI1.310e-1436.15GIY-YIG domain-containing protein (Fragment) n=1 T... [more]
A0A151JLZ4_9HYME1.630e-1433.59GIY-YIG domain-containing protein (Fragment) n=1 T... [more]
A0A151IAU7_9HYME2.720e-1434.33GIY-YIG domain-containing protein (Fragment) n=1 T... [more]
A0A151JB04_9HYME2.940e-1439.81GIY-YIG domain-containing protein (Fragment) n=1 T... [more]
A0A151JPB2_9HYME3.000e-1442.71GIY-YIG domain-containing protein n=1 Tax=Trachymy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1052contigH-akashiwo_Contig1052:368516..368932 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog13037.EHJ63722
PFAMsRVT_1
Model size417
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.71e-05
EggNOG OGs2CN36@1|root,2QTNN@2759|Eukaryota,38FJC@33154|Opisthokonta,3BM27@33208|Metazoa,3D0HQ@33213|Bilateria
Cds size417
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387063.6062465-CDS-H-akashiwo_Contig1052:368515..3689321681387063.6062465-CDS-H-akashiwo_Contig1052:368515..368932Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1052 368516..368932 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1052.9.1prot_H-akashiwo_Contig1052.9.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1052 368516..368932 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1052.9.1

>prot_H-akashiwo_Contig1052.9.1 ID=prot_H-akashiwo_Contig1052.9.1|Name=mRNA_H-akashiwo_Contig1052.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=139bp
LYSAEFEASLQENGQLGNLLAPRRPSTGGMQQKNVVYKISCKQCEVSYVG
QTKRTLATRVKKHSRSVDAAKTSLFVDRKGKNDTGLPAHCLDTDFSHRFD
FDNAEVLCRETHWGKRLKKEAIYTAMVENTCNIQKGRDL
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mRNA from alignment at H-akashiwo_Contig1052:368516..368932+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1052.9.1 ID=mRNA_H-akashiwo_Contig1052.9.1|Name=mRNA_H-akashiwo_Contig1052.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=417bp|location=Sequence derived from alignment at H-akashiwo_Contig1052:368516..368932+ (Heterosigma akashiwo CCMP452)
TTGTACTCGGCTGAATTTGAAGCTTCTTTACAAGAGAACGGTCAACTTGG CAATTTGCTGGCTCCTAGAAGACCGTCCACTGGTGGAATGCAGCAGAAGA ATGTGGTCTACAAGATCTCTTGTAAGCAGTGTGAGGTTAGTTATGTTGGT CAGACCAAAAGAACACTAGCCACAAGGGTGAAGAAGCATAGCCGGTCAGT GGATGCAGCCAAGACTTCCTTGTTTGTTGACAGAAAGGGAAAGAACGACA CAGGTTTGCCTGCTCACTGCTTGGACAcCGATTTCTCTCATCGATTTGAC TTTGACAATGCTGAGGTGCTGTGCAGAGAGACCCACTGGGGTAAGAGGTT GAAGAAGGAGGCCATATATACTGCAATGGTGGAGAACACTTGCAACATCC AGAAGGGCAGAGATTTG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1052:368516..368932+

>mRNA_H-akashiwo_Contig1052.9.1 ID=mRNA_H-akashiwo_Contig1052.9.1|Name=mRNA_H-akashiwo_Contig1052.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=417bp|location=Sequence derived from alignment at H-akashiwo_Contig1052:368516..368932+ (Heterosigma akashiwo CCMP452)
TTGTACTCGGCTGAATTTGAAGCTTCTTTACAAGAGAACGGTCAACTTGG
CAATTTGCTGGCTCCTAGAAGACCGTCCACTGGTGGAATGCAGCAGAAGA
ATGTGGTCTACAAGATCTCTTGTAAGCAGTGTGAGGTTAGTTATGTTGGT
CAGACCAAAAGAACACTAGCCACAAGGGTGAAGAAGCATAGCCGGTCAGT
GGATGCAGCCAAGACTTCCTTGTTTGTTGACAGAAAGGGAAAGAACGACA
CAGGTTTGCCTGCTCACTGCTTGGACAcCGATTTCTCTCATCGATTTGAC
TTTGACAATGCTGAGGTGCTGTGCAGAGAGACCCACTGGGGTAAGAGGTT
GAAGAAGGAGGCCATATATACTGCAATGGTGGAGAACACTTGCAACATCC
AGAAGGGCAGAGATTTG
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