mRNA_H-akashiwo_Contig1051.9.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1051.9.1
Unique NamemRNA_H-akashiwo_Contig1051.9.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A7S4DE18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE18_HETAK)

HSP 1 Score: 207 bits (526), Expect = 9.510e-55
Identity = 148/421 (35.15%), Postives = 211/421 (50.12%), Query Frame = 1
Query:    7 RGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFM--DQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCAIMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHL-LLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTS 1260
            RG +PG+ G+RYEHLK LL P GGD  P+ + F   L    +   TR+ L +       K  G  RP+  + T  R   +TL   YK  W + LGP QFAVG P G +KL    +  +  D  +  D P C L +DA NAFN C RQ FM  L++++PEL  + +Q+Y H    +         H + S +GTQQGDP G FLFCLGL+  L+++  + SG  A+    DD+ + + + +    ++        YGL +      L    +     G L Q  GL   +P S    EG + +        G+P+G+  +I+  L  ++A+T   LL EI ++   Q  LL+LR  A PR  +  R +P         L QHD  V D L  +LG+  +DL+D Q  QI  P+ LGG GL S
Sbjct:  939 RGGAPGVFGFRYEHLKMLLPPAGGDSFPMAR-FAHDLATGQLLPATREGLAISKLVGFEKPGGGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPD-PICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVF------GSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALAS-SDDILLAVRASQLAAVFQVVVEELGAYGLRVN-----LAKCCAYCPRPGAL-QDAGLPADLPVSY---EGILHL--------GVPFGTDAFIDREL-DKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGL--VDLTDNQRAQIHLPIRLGGFGLLS 1330          
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4GGY8_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GGY8_9ALVE)

HSP 1 Score: 199 bits (507), Expect = 2.980e-53
Identity = 134/379 (35.36%), Postives = 191/379 (50.40%), Query Frame = 1
Query:    1 ASRGSSPGIAGWRYEHLKALLEPDG---GDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKED-GD-VRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLS-----GPCAIMGLMDDVTVLLPSHEAE---EAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLL 1098
            A+RGS+ GI+GWRYEH++  L  DG   G  +  +    Q L     P    +LL  G  F LNK+  GD VRPIT  D L R   + ++ +Y+E++ +HL  +Q+AV T  G DK+   V+  +            L +DA NAFN CDRQ  MD L+K FPEL+ FF+  +Y     I +R + GT    +S +G QQGD AGP LFCLGLK  LEKL  +L        C I   MDD++++ PS  A+    AW     +  +YGLTL   K K      +    G+ E+ + L+  +P  +V  EG         KL+G   G   ++    +++L +   L   +   G  Q   LL R C  P+  Y  R++
Sbjct:  194 AARGSAQGISGWRYEHIRFFLPGDGSGGGAGSCALLTVAQCLTAGNAPPSLLRLLASGRFFALNKDTKGDKVRPITIGDVLRRWVIKAILIEYREKFEEHLSALQYAVRTSAGADKIFCAVQICLQLCPNS----ILLQIDANNAFNTCDRQKAMDQLRKHFPELYRFFS-LWYGTSIPIFFRDQKGTLRMFLSQEGIQQGDVAGPLLFCLGLKLALEKLQKRLHEKHGRAGCFIGAYMDDLSLIFPSSSADCLTSAWSDCIEILGKYGLTLNLGKDKNAAFSPSW--RGKTER-EILQQRLPGLEVSTEGY--------KLMGAAGGGDTFVNTLFEKKLGEATKLEKLVEGYGDPQGCSLLFRYCIFPKLVYLARVM 556          
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A7S3Y7Z7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7Z7_HETAK)

HSP 1 Score: 201 bits (510), Expect = 1.130e-52
Identity = 147/424 (34.67%), Postives = 208/424 (49.06%), Query Frame = 1
Query:    7 RGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVG---TGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFM--DQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCAIMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHL-LLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTS 1260
            RG +PG+ G+RYEHLK LL P GGD  P+            +P   + LL +     GF      G  RP+  +    R   +TL   YK  W + LGP QFAVG P G +KL    +  +  D  +  D P C L +DA NAFN C RQ FM  L++++PEL  + +Q+Y H    +         H + S +GTQQGDP G FLFCLGL+  L+++  + SG  A+    DD+ + + + +    ++        YGL +      L    +     G L Q  GL   +P S    EG + +        G+P+G+  +I+  L  ++A+T   LL EI ++   Q  LL+LR  A PR  +  R +P         L QHD  V D L  +LG+  +DLSD Q  QI  P+ LGG GL S
Sbjct:  939 RGGAPGVFGFRYEHLKMLLPPAGGDSFPMAHFAHDLATGQLLPATRKGLLEISKLVVGFE-KPGRGGARPVAISSIWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPD-PICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVF------GSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALAS-SDDILLAVRASQLAAVFQVVVEELGAYGLRVN-----LAKCCAYCPRPGAL-QDAGLPADLPVSY---EGILHL--------GVPFGTDAFIDREL-DKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGL--VDLSDNQRAQIHLPIRLGGFGLLS 1333          
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4G4F1_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G4F1_VITBC)

HSP 1 Score: 199 bits (506), Expect = 4.450e-52
Identity = 141/438 (32.19%), Postives = 205/438 (46.80%), Query Frame = 1
Query:    1 ASRGSSPGIAGWRYEHLKALLEPDG-----GDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCA-IMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVE-IDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQ--DQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTSQASLSRMAH 1287
            A++G++PG +GWR+EHL   L         G+E       ++ L+++ +P    +LL       L K    VRP+   D + R  TR +  QYK +   +  P+Q AVGTP G +KL      F+    +G+       LD  NAFN  DRQ  ++ L   FPEL  F  QFY    + + YR  DG    ++S QGTQQGDPAGPFLFCL L+ VL+ +  Q S P A I   MDD+T      EA+    KA+       L L   KSK      T +               PP  + P  E E +   G  ++G   G+  Y+ + L+  L     L+  +      Q  D  LL R+CA PR  YW RLL       ++     D  V++    + G+   D ++ Q  Q+  P+  GGMG+T+ +++   A+
Sbjct:  525 AAKGAAPGPSGWRFEHLLGYLNSSKQGLRQGEERIPFPKIIRRLLSAKLPQLVTKLLGTANLMALTKGPSKVRPVAVGDAVRRWVTRAVCMQYKNKMAAYFAPLQCAVGTPAGNEKLFKAAETFIQSRREGEKRLLTT-LDCTNAFNEVDRQAIVNELASQFPELFHFLWQFY-GEPAELWYRLADGRVRTILSQQGTQQGDPAGPFLFCLALQPVLKAI--QASYPRALIQAFMDDITPGADESEADGVVNKAEEELQTISLKLARKKSKAYGPHWTDSEP-------------PPDDLLPGFEREGLSGEGIDILGGAIGTDGYVANKLQSVLDSHRPLIERLNAFAHEQRQDSSLLFRSCAVPRLYYWLRLLSQRPLTTEVTALMRDEEVMNAAIAIHGLGEEDSTEPQRRQMALPVREGGMGITAASAILPAAY 945          
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4GD26_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GD26_VITBC)

HSP 1 Score: 196 bits (499), Expect = 2.990e-51
Identity = 137/436 (31.42%), Postives = 199/436 (45.64%), Query Frame = 1
Query:    7 RGSSPGIAGWRYEHLKALL---EPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCAIMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGS--VQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTSQASLSRMAHCASI 1299
            RGS+ G  GWRYEHL+A +   +    DE   +   +  ++   +P      L     F L K++G VRPI   D LWR  T+ +  + K  + +   P+QFAVGT  G +K     + +M+           + LD +NAFN  DRQ  +D L   +P    FF QFY    + + YR +DG    ++S +GTQQGD AGPFLFCLGL   L KL  +      +   MDD+   L          +A+ L  E  L LR DKS           + R +Q   +     P+ +   G V+    G  ++G P G  ++I+  L++  +    LL  I       +Q   LLLR CA PR  YW RLLP +         +HD  ++     +      D       Q+  P+ L G GL S ++++R A   SI
Sbjct:  433 RGSAAGPTGWRYEHLRACMGEGDASAEDETVPLPSLVSRMLAGNMPDSCTTTLSAARLFALMKDNGGVRPIAMGDVLWRWVTKAVCMENKLAFEEDFSPLQFAVGTLAGGEKTFRACQTYMETRRDDSGRRVLVTLDCKNAFNSIDRQSILDELGIKWPSFVDFFWQFY-GTPAELWYRMKDGRTETILSQEGTQQGDAAGPFLFCLGLHPALVKLQEEFPDDF-VSAFMDDIDGELDETRVTGYVDRAEQLLAEKKLRLRRDKS--------AAWSPRWQQDSDI-----PADIAASG-VKCSTEGITVLGCPLGGDYFIQHSLEKITSSHQPLLDAIVTFAQKGLQGSGLLLRYCASPRLNYWLRLLPSESDVSLAAAERHDAAIITAFRRMFRFPG-DFPASVSTQVQLPIRLEGFGLVSASTIARAAFLCSI 851          
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4HXB0_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HXB0_9ALVE)

HSP 1 Score: 194 bits (493), Expect = 2.130e-50
Identity = 143/440 (32.50%), Postives = 209/440 (47.50%), Query Frame = 1
Query:    1 ASRGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKE--DGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLG-LKAVLEKLHTQLSGP-----CAIMGLMDDVTVLLP----------SHEAE--EAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGW-PLHLGGMGLT 1257
            A +GS+ G+ GWRYEHL   L  DG  +A +++     L     P     LL  G  F LNK     +VRPI   D L R  TR ++ ++  ++  HLGP+QFAV T  G +KL  CV+  + +          L LDA NAFN  DRQV MD +   FP+L+ FFA  +Y   S +++R + G    +   +G QQGD AGP LFC+G LK  L+ L   L        C +   MDDV+++ P           H+     AWR + A    +GLTLR DKS +               +QGL+   P +   P G +     G +L G   G++ Y   +  ++L +   L   +   G  Q   LL R C  P+  Y  R++  D  A D + SQ D  + +    ++GI   + +  ++    + P + GG+GLT
Sbjct:  850 APKGSAQGVTGWRYEHLSYFLPRDGSAQARILR-IATCLARGDAPVGFISLLAGGRCFALNKNARGTEVRPIVVGDVLRRWVTRAILLEFGVQFERHLGPLQFAVRTRAGIEKLFRCVQTCLQRSPSS----AVLNLDASNAFNAYDRQVIMDQVHAYFPQLYSFFA-LWYETPSDLVFRDQSGLLRRITCEEGVQQGDVAGPLLFCMGPLKPSLDGLLGDLQAKHGGRGCFVGAFMDDVSMVFPLCPFQQIPTDGHDDSILHAWRVSVARLQSFGLTLRPDKSSV-----------HSPSWQGLREY-PSAYPSPPGIIP-SLAGFRLCGAASGTTEYQRAHFDKKLKEARELSQAVEGYGDPQGAHLLFRFCVLPKLIYLTRIMG-DVIALDEW-SQADRELGESWARIIGIMEQEWAYGEVRNQAYLPQYQGGLGLT 1268          
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4HVR7_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HVR7_9ALVE)

HSP 1 Score: 192 bits (488), Expect = 9.720e-50
Identity = 135/432 (31.25%), Postives = 199/432 (46.06%), Query Frame = 1
Query:   22 GIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKE--DGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGP-----CAIMGLMDDVTVLLP----------SHEAE--EAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGW-PLHLGGMGLT 1257
            G+ GWRYEHL   L  DG  +A +++     L     P     LL  G  F LNK     +VRPI   D L R  TR ++ ++  ++  HLGP+QFAV T  G +KL  CV+  + +          L LD  NAFN CDRQV +D +   FP+L+ FFA  +Y   S +++R + G    +   +G QQGD AGP LFC+GLK  L+ L   L        C +   MDDV+++ P           H+     AWR + A    +GLTLR DKS +               +QGL+    PS       +     G +L G+  G+  Y   +  ++L +   L   +   G  Q   LL R C  P+  Y  R++       +   SQ D  + +    ++GI   + +  ++    + P + GG+GLT
Sbjct:  959 GVTGWRYEHLSYFLPRDGSAQARILR-IATCLARGDAPVGFISLLAGGRCFALNKNARGTEVRPIVVGDVLRRWTTRAILLEFGVQFERHLGPLQFAVRTRAGTEKLFRCVQTCLQRSPSS----AVLNLDVSNAFNACDRQVIIDQVHAHFPQLYSFFA-LWYGTPSDLVFRDQSGLLRRITCEEGVQQGDVAGPLLFCMGLKPSLDGLLGDLQAKHGGRGCFVGAFMDDVSMVFPLCPFQQIPTDGHDDSILHAWRVSAARLQSFGLTLRPDKSSV-----------HSPSWQGLREC--PSAYPSPPRIIPSLAGFRLCGVASGTIEYQSAHFDKKLKEERELSQAVEGYGDPQGAHLLFRFCVLPKLIYLIRIMGDVITLGEW--SQADGELGESCARIMGITEQEWAHGEIRNQAYLPQYQGGLGLT 1369          
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4GRQ9_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GRQ9_9ALVE)

HSP 1 Score: 186 bits (471), Expect = 3.620e-48
Identity = 140/443 (31.60%), Postives = 209/443 (47.18%), Query Frame = 1
Query:    1 ASRGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKE--DGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKL--THCVRAFMDQVEKGDTPYCA-LPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLK------AVLEKLHTQLSGP-CAIMGLMDDVTVLLP----------SHEAE--EAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLD-LSDQQLMQIGWPLHLGGMGL 1254
            A +GS+ G+ GWRY+HL   L  DG  +A ++      L     P     LL  G  F LNK     +VRPI   D L    TR ++ ++  ++  HLGP+QFAV T  G +KL    CV+ ++ +     +P  A L LDA NAFN CDRQV M+ +   FP+L+ FFA  +Y   S +++R + G    +I  +G QQGD  GPFLFC+GLK      A+L  L  +  G  C +   MDD +++ P           H+     AWR   A    +GLTLR DKS +               +QGL+   P +   P G +     G +L G   G++ Y   +  ++L +   L   + + G  Q   LL R C  P+  Y  R++       +   SQ D  + +    ++G+   + +  +   Q   P + GG+GL
Sbjct:   45 APKGSAQGVTGWRYKHLSYFLPRDGSVQARILH-IATCLARGDAPVGFISLLAGGRCFALNKNARGTEVRPIVVGDVLRWWVTRAILLEFGIQFERHLGPLQFAVRTRAGTEKLFGIRCVQTYLQR-----SPSSAMLNLDASNAFNTCDRQVIMNQVYAHFPQLYSFFA-LWYRTPSDLVFRDQSGLLRRIICEEGVQQGDVVGPFLFCMGLKPSLDGLAMLGDLQAKHRGRGCFVGAFMDDASMVFPLCPFQQIPTDGHDDSILHAWRVDAARLQSFGLTLRPDKSSV-----------HSPSWQGLREC-PSAYPSPPG-ITPSLPGFRLCGAASGTTEYQSAHFDKKLREAWELSQAVEEYGDPQGAYLLFRFCVLPKLIYLTRIMGDVITLGEW--SQADRELGESWARIMGMTEQEWVYGEVRNQAYLPQYQGGLGL 465          
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4FY66_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FY66_VITBC)

HSP 1 Score: 185 bits (470), Expect = 1.620e-47
Identity = 135/438 (30.82%), Postives = 203/438 (46.35%), Query Frame = 1
Query:    1 ASRGSSPGIAGWRYEHLKALLEPDG-----GDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCA-IMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVE-IDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSV--QDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTSQASLSRMAH 1287
            A++G++PG +GWR+EHL   L         G+E       ++ L+++ +     +LL       L K  G VRP+   D + R  TR +  Q+K +   +  P+Q AVGTP G +KL      F+    +G+       LD  NAFN  DRQ  ++ L   FPEL  F  QFY    + + YR  DG    ++S QGTQQG+PAGPFLFCL L+ VL+ +  Q S P A I   M+D+T      +A+    KA+       L L   KSK      T                 PP  + P  E E +   G  ++G    +  Y+ + L+  L     L+  +    +   QD  LL R+CA  R  YW RLLP      ++     D  V++    + G+   D ++ Q  Q+  P+  G MG+T+ +++   A+
Sbjct:  139 AAKGAAPGPSGWRFEHLLGYLNLSKQGLWQGEERIPFPKIIRRLLSAKLSQLVTKLLGTANLMALTKGPGKVRPVAVGDAVRRWVTRAVCMQHKNKMAAYFAPLQCAVGTPAGNEKLFKAAETFIQSRREGEKRLLTT-LDCTNAFNEVDRQAIVNELASQFPELFHFLWQFY-GEPAKLWYRLADGRVRTILSQQGTQQGEPAGPFLFCLALQPVLKAI--QASFPRALIQAFMNDITPGADKSKADGVVDKAEEELQTISLKLARKKSKAYGPHWTDREP-------------PPDDLLPGFEREGLSSEGIDILGGAIWTDSYVANKLQSVLDSHRPLIERLKAFANEHRQDSSLLFRSCAVARLYYWLRLLPQRPSTTEVTALLRDEEVMNAAIAIHGLGEEDTTEPQRRQMALPVREGEMGITAASAILPAAY 559          
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4GFY2_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GFY2_VITBC)

HSP 1 Score: 181 bits (458), Expect = 9.160e-46
Identity = 146/459 (31.81%), Postives = 205/459 (44.66%), Query Frame = 1
Query:    1 ASRGSSPGIAGWRYEHLKALL-EPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYC--------ALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCAIMG-LMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMG------SVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTSQASLSRMAHCASIADSSGAIYQR 1329
            A RGS+ G  GWRYEHL+ L+ E     +A  +  F+Q +++  +P    +LL     F L K  G VRPI   D L R  TR L  Q+K  + +   P QFAVGT  G +KL    + ++ Q +   +P           L LD  NAFN   RQ  +D L    P +  FF QFY    + + Y  E G    V S QG QQGD AGPFLFCL  +  L +L  Q   P A++G  MDD    +           A+  F    L LR DK         + ++              P+ +   G V     G  L+  P G+  ++E  + + +A    LL  +          +VQ   LLLR C  PR  YW RLL P  P+       HD   +     +     L LS ++ +Q+  P+ LGG GL S A ++  A+  S+A + G ++ R
Sbjct: 1375 APRGSAAGPTGWRYEHLQVLVGEAHTNADAVPVLKFVQRMLDGDLPPVVTKLLAAARLFALEKPGGGVRPIAIGDALRRWVTRALCLQHKLEFEEEFRPHQFAVGTSAGGEKLFRTAQTYI-QTQDAASPDADGPPLTRTLLSLDCRNAFNEISRQRIVDELAAKHPAMVAFFWQFY-GTAAPLWYTMEGGRVETVHSRQGVQQGDVAGPFLFCLAFQPALRRL--QEGFPDALVGGFMDDGLGGMDESSVPSFLTAAEEAFRAINLVLRLDKCHAWSPHWRSAAD-------------VPTAITRRG-VRASTEGIILLSAPIGTPAFVERTVNEVVASHQRLLDAVVAFAVNDGDYAVQGANLLLRYCGSPRFLYWCRLLAPS-PSVLAAARAHDAAKVAAFAHIQRTGALSLSARRQVQL--PIRLGGFGLVSSARVAPAAYLGSVAATVGDVWDR 1812          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DE18_HETAK9.510e-5535.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4GGY8_9ALVE2.980e-5335.36Reverse transcriptase domain-containing protein n=... [more]
A0A7S3Y7Z7_HETAK1.130e-5234.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0G4G4F1_VITBC4.450e-5232.19Reverse transcriptase domain-containing protein n=... [more]
A0A0G4GD26_VITBC2.990e-5131.42Reverse transcriptase domain-containing protein n=... [more]
A0A0G4HXB0_9ALVE2.130e-5032.50Reverse transcriptase domain-containing protein n=... [more]
A0A0G4HVR7_9ALVE9.720e-5031.25Reverse transcriptase domain-containing protein n=... [more]
A0A0G4GRQ9_9ALVE3.620e-4831.60Reverse transcriptase domain-containing protein n=... [more]
A0A0G4FY66_VITBC1.620e-4730.82Reverse transcriptase domain-containing protein n=... [more]
A0A0G4GFY2_VITBC9.160e-4631.81Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1051contigH-akashiwo_Contig1051:401773..403104 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog400682.PAC_15702057
PFAMsRVT_1,zf-RVT
Model size1332
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.08e-23
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota
DescriptionRibonuclease H protein
Cds size1332
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387063.0766563-CDS-H-akashiwo_Contig1051:401772..4031041681387063.0766563-CDS-H-akashiwo_Contig1051:401772..403104Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1051 401773..403104 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1051.9.1prot_H-akashiwo_Contig1051.9.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1051 401773..403104 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1051.9.1

>prot_H-akashiwo_Contig1051.9.1 ID=prot_H-akashiwo_Contig1051.9.1|Name=mRNA_H-akashiwo_Contig1051.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=444bp
ASRGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQ
LLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQ
FAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFM
DALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAG
PFLFCLGLKAVLEKLHTQLSGPCAIMGLMDDVTVLLPSHEAEEAWRKAKA
LFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEV
EIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQDQLLL
LRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLS
DQQLMQIGWPLHLGGMGLTSQASLSRMAHCASIADSSGAIYQRL
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mRNA from alignment at H-akashiwo_Contig1051:401773..403104+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1051.9.1 ID=mRNA_H-akashiwo_Contig1051.9.1|Name=mRNA_H-akashiwo_Contig1051.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1332bp|location=Sequence derived from alignment at H-akashiwo_Contig1051:401773..403104+ (Heterosigma akashiwo CCMP452)
GCCTCCAGGGGCTCCTCCCCGGGCATCGCGGGCTGGAGATATGAACATCT GAAAGCCCTTCTGGAGCCAGACGGAGGGGACGAAGCCCCCCTCATTCAGC CCTTCATGCAGGCCCTGGTGAACTCAGCGGTTCCTGGCGAGACTCGCCAG CTGCTTCGTGTTGGCACGGGGTTCCTCCTCAACAAGGAAGATGGGGACGT ACGCCCGATCACCACAGCTGATACCCTTTGGCGCACGGCCACACGCACCC TAGTCTTCCAGTACAAAGAGCGGTGGAGAGATCACCTAGGTCCCATGCAG TTTGCGGTCGGCACCCCCAACGGCTGCGACAAACTGACTCATTGCGTCCG CGCCTTCATGGACCAGGTGGAGAAAGGAGACACCCCATACTGTGCCCTGC CACTGGACGCGGAGAACGCTTTCAACTGCTGCGACAGACAGGTTTTCATG GACGCCTTGCAAAAGGATTTCCCAGAACTACATGGTTTCTTTGCGCAGTT CTACTATCACGTAGAATCTGGTATTATGTACCGTGGAGAAGATGGCACTC CGCACTTCGTAATAAGTAGTCAAGGCACTCAGCAAGGTGACCCTGCGGGG CCCTTCCTTTTTTGCCTAGGCCTCAAGGCAGTGCTAGAAAAGTTACATAC TCAGTTGTCAGGGCCCTGCGCCATCATGGGACTTATGGATGATGTCACGG TACTCCTCCCCTCGCATGAAGCAGAAGAGGCCTGGCGCAAGGCCAAAGCC CTGTTCTTAGAGTATGGCCTAACCTTGCGCTCTGACAAGTCCAAACTCCT ACCCCTTGACTCTACTACAACAAGTAATGGCAGACTGGAGCAGTTCCAGG GCCTCAAGACACTTGTCCCACCTAGCCAGGTACAGCCGGAGGGAGAGGTA GAGATTGACCGTTTGGGGGCCAAACTGGTAGGGATCCCATATGGGTCCTC CCACTACATAGAGGACTACCTCAAACAGCGGCTGGCCAAAACCCACCTCC TCCTTACAGAGATAGCCAAAATGGGCTCAGTTCAGGACCAACTCCTGCTC CTCAGAGCCTGCGCCCACCCGCGCGCTGCCTACTGGAACCGGCTCCTTCC TCCCGATTACCCCGCCAAGGATCTCTTCTTGTCCCAGCACGACAACATGG TGCTAGACTGCCTGTGTACCGTACTCGGCATCAACAGGCTGGACCTATCA GACCAACAGCTAATGCAAATCGGCTGGCCACTCCACCTGGGGGGAATGGG GCTGACCTCTCAGGCCTCCCTGTCTCGGATGGCACACTGCGCCTCAATCG CTGACAGCTCGGGGGCCATCTACCAGCGCCTC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1051:401773..403104+

>mRNA_H-akashiwo_Contig1051.9.1 ID=mRNA_H-akashiwo_Contig1051.9.1|Name=mRNA_H-akashiwo_Contig1051.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1332bp|location=Sequence derived from alignment at H-akashiwo_Contig1051:401773..403104+ (Heterosigma akashiwo CCMP452)
GCCTCCAGGGGCTCCTCCCCGGGCATCGCGGGCTGGAGATATGAACATCT
GAAAGCCCTTCTGGAGCCAGACGGAGGGGACGAAGCCCCCCTCATTCAGC
CCTTCATGCAGGCCCTGGTGAACTCAGCGGTTCCTGGCGAGACTCGCCAG
CTGCTTCGTGTTGGCACGGGGTTCCTCCTCAACAAGGAAGATGGGGACGT
ACGCCCGATCACCACAGCTGATACCCTTTGGCGCACGGCCACACGCACCC
TAGTCTTCCAGTACAAAGAGCGGTGGAGAGATCACCTAGGTCCCATGCAG
TTTGCGGTCGGCACCCCCAACGGCTGCGACAAACTGACTCATTGCGTCCG
CGCCTTCATGGACCAGGTGGAGAAAGGAGACACCCCATACTGTGCCCTGC
CACTGGACGCGGAGAACGCTTTCAACTGCTGCGACAGACAGGTTTTCATG
GACGCCTTGCAAAAGGATTTCCCAGAACTACATGGTTTCTTTGCGCAGTT
CTACTATCACGTAGAATCTGGTATTATGTACCGTGGAGAAGATGGCACTC
CGCACTTCGTAATAAGTAGTCAAGGCACTCAGCAAGGTGACCCTGCGGGG
CCCTTCCTTTTTTGCCTAGGCCTCAAGGCAGTGCTAGAAAAGTTACATAC
TCAGTTGTCAGGGCCCTGCGCCATCATGGGACTTATGGATGATGTCACGG
TACTCCTCCCCTCGCATGAAGCAGAAGAGGCCTGGCGCAAGGCCAAAGCC
CTGTTCTTAGAGTATGGCCTAACCTTGCGCTCTGACAAGTCCAAACTCCT
ACCCCTTGACTCTACTACAACAAGTAATGGCAGACTGGAGCAGTTCCAGG
GCCTCAAGACACTTGTCCCACCTAGCCAGGTACAGCCGGAGGGAGAGGTA
GAGATTGACCGTTTGGGGGCCAAACTGGTAGGGATCCCATATGGGTCCTC
CCACTACATAGAGGACTACCTCAAACAGCGGCTGGCCAAAACCCACCTCC
TCCTTACAGAGATAGCCAAAATGGGCTCAGTTCAGGACCAACTCCTGCTC
CTCAGAGCCTGCGCCCACCCGCGCGCTGCCTACTGGAACCGGCTCCTTCC
TCCCGATTACCCCGCCAAGGATCTCTTCTTGTCCCAGCACGACAACATGG
TGCTAGACTGCCTGTGTACCGTACTCGGCATCAACAGGCTGGACCTATCA
GACCAACAGCTAATGCAAATCGGCTGGCCACTCCACCTGGGGGGAATGGG
GCTGACCTCTCAGGCCTCCCTGTCTCGGATGGCACACTGCGCCTCAATCG
CTGACAGCTCGGGGGCCATCTACCAGCGCCTC
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