mRNA_H-akashiwo_Contig1051.9.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A7S4DE18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE18_HETAK) HSP 1 Score: 207 bits (526), Expect = 9.510e-55 Identity = 148/421 (35.15%), Postives = 211/421 (50.12%), Query Frame = 1 Query: 7 RGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFM--DQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCAIMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHL-LLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTS 1260 RG +PG+ G+RYEHLK LL P GGD P+ + F L + TR+ L + K G RP+ + T R +TL YK W + LGP QFAVG P G +KL + + D + D P C L +DA NAFN C RQ FM L++++PEL + +Q+Y H + H + S +GTQQGDP G FLFCLGL+ L+++ + SG A+ DD+ + + + + ++ YGL + L + G L Q GL +P S EG + + G+P+G+ +I+ L ++A+T LL EI ++ Q LL+LR A PR + R +P L QHD V D L +LG+ +DL+D Q QI P+ LGG GL S Sbjct: 939 RGGAPGVFGFRYEHLKMLLPPAGGDSFPMAR-FAHDLATGQLLPATREGLAISKLVGFEKPGGGARPVAISSTWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPD-PICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVF------GSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALAS-SDDILLAVRASQLAAVFQVVVEELGAYGLRVN-----LAKCCAYCPRPGAL-QDAGLPADLPVSY---EGILHL--------GVPFGTDAFIDREL-DKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGL--VDLTDNQRAQIHLPIRLGGFGLLS 1330
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4GGY8_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GGY8_9ALVE) HSP 1 Score: 199 bits (507), Expect = 2.980e-53 Identity = 134/379 (35.36%), Postives = 191/379 (50.40%), Query Frame = 1 Query: 1 ASRGSSPGIAGWRYEHLKALLEPDG---GDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKED-GD-VRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLS-----GPCAIMGLMDDVTVLLPSHEAE---EAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLL 1098 A+RGS+ GI+GWRYEH++ L DG G + + Q L P +LL G F LNK+ GD VRPIT D L R + ++ +Y+E++ +HL +Q+AV T G DK+ V+ + L +DA NAFN CDRQ MD L+K FPEL+ FF+ +Y I +R + GT +S +G QQGD AGP LFCLGLK LEKL +L C I MDD++++ PS A+ AW + +YGLTL K K + G+ E+ + L+ +P +V EG KL+G G ++ +++L + L + G Q LL R C P+ Y R++ Sbjct: 194 AARGSAQGISGWRYEHIRFFLPGDGSGGGAGSCALLTVAQCLTAGNAPPSLLRLLASGRFFALNKDTKGDKVRPITIGDVLRRWVIKAILIEYREKFEEHLSALQYAVRTSAGADKIFCAVQICLQLCPNS----ILLQIDANNAFNTCDRQKAMDQLRKHFPELYRFFS-LWYGTSIPIFFRDQKGTLRMFLSQEGIQQGDVAGPLLFCLGLKLALEKLQKRLHEKHGRAGCFIGAYMDDLSLIFPSSSADCLTSAWSDCIEILGKYGLTLNLGKDKNAAFSPSW--RGKTER-EILQQRLPGLEVSTEGY--------KLMGAAGGGDTFVNTLFEKKLGEATKLEKLVEGYGDPQGCSLLFRYCIFPKLVYLARVM 556
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A7S3Y7Z7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7Z7_HETAK) HSP 1 Score: 201 bits (510), Expect = 1.130e-52 Identity = 147/424 (34.67%), Postives = 208/424 (49.06%), Query Frame = 1 Query: 7 RGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVG---TGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFM--DQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCAIMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHL-LLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTS 1260 RG +PG+ G+RYEHLK LL P GGD P+ +P + LL + GF G RP+ + R +TL YK W + LGP QFAVG P G +KL + + D + D P C L +DA NAFN C RQ FM L++++PEL + +Q+Y H + H + S +GTQQGDP G FLFCLGL+ L+++ + SG A+ DD+ + + + + ++ YGL + L + G L Q GL +P S EG + + G+P+G+ +I+ L ++A+T LL EI ++ Q LL+LR A PR + R +P L QHD V D L +LG+ +DLSD Q QI P+ LGG GL S Sbjct: 939 RGGAPGVFGFRYEHLKMLLPPAGGDSFPMAHFAHDLATGQLLPATRKGLLEISKLVVGFE-KPGRGGARPVAISSIWRRHVGKTLCGLYKGPWAESLGPTQFAVGVPAGTEKLLKLAQTILGADDPDSPD-PICLLQIDATNAFNSCSRQDFMRLLRREYPELVPYVSQWYDHPTPLVF------GSHTLWSREGTQQGDPFGSFLFCLGLRPALDRILARCSGARALAS-SDDILLAVRASQLAAVFQVVVEELGAYGLRVN-----LAKCCAYCPRPGAL-QDAGLPADLPVSY---EGILHL--------GVPFGTDAFIDREL-DKIARTSCELLQEIKELDDPQVALLILRMSAAPRMVHLTRAMPLYSEQLVDHLVQHDRRVADTLTHILGL--VDLSDNQRAQIHLPIRLGGFGLLS 1333
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4G4F1_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G4F1_VITBC) HSP 1 Score: 199 bits (506), Expect = 4.450e-52 Identity = 141/438 (32.19%), Postives = 205/438 (46.80%), Query Frame = 1 Query: 1 ASRGSSPGIAGWRYEHLKALLEPDG-----GDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCA-IMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVE-IDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQ--DQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTSQASLSRMAH 1287 A++G++PG +GWR+EHL L G+E ++ L+++ +P +LL L K VRP+ D + R TR + QYK + + P+Q AVGTP G +KL F+ +G+ LD NAFN DRQ ++ L FPEL F QFY + + YR DG ++S QGTQQGDPAGPFLFCL L+ VL+ + Q S P A I MDD+T EA+ KA+ L L KSK T + PP + P E E + G ++G G+ Y+ + L+ L L+ + Q D LL R+CA PR YW RLL ++ D V++ + G+ D ++ Q Q+ P+ GGMG+T+ +++ A+ Sbjct: 525 AAKGAAPGPSGWRFEHLLGYLNSSKQGLRQGEERIPFPKIIRRLLSAKLPQLVTKLLGTANLMALTKGPSKVRPVAVGDAVRRWVTRAVCMQYKNKMAAYFAPLQCAVGTPAGNEKLFKAAETFIQSRREGEKRLLTT-LDCTNAFNEVDRQAIVNELASQFPELFHFLWQFY-GEPAELWYRLADGRVRTILSQQGTQQGDPAGPFLFCLALQPVLKAI--QASYPRALIQAFMDDITPGADESEADGVVNKAEEELQTISLKLARKKSKAYGPHWTDSEP-------------PPDDLLPGFEREGLSGEGIDILGGAIGTDGYVANKLQSVLDSHRPLIERLNAFAHEQRQDSSLLFRSCAVPRLYYWLRLLSQRPLTTEVTALMRDEEVMNAAIAIHGLGEEDSTEPQRRQMALPVREGGMGITAASAILPAAY 945
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4GD26_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GD26_VITBC) HSP 1 Score: 196 bits (499), Expect = 2.990e-51 Identity = 137/436 (31.42%), Postives = 199/436 (45.64%), Query Frame = 1 Query: 7 RGSSPGIAGWRYEHLKALL---EPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCAIMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGS--VQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTSQASLSRMAHCASI 1299 RGS+ G GWRYEHL+A + + DE + + ++ +P L F L K++G VRPI D LWR T+ + + K + + P+QFAVGT G +K + +M+ + LD +NAFN DRQ +D L +P FF QFY + + YR +DG ++S +GTQQGD AGPFLFCLGL L KL + + MDD+ L +A+ L E L LR DKS + R +Q + P+ + G V+ G ++G P G ++I+ L++ + LL I +Q LLLR CA PR YW RLLP + +HD ++ + D Q+ P+ L G GL S ++++R A SI Sbjct: 433 RGSAAGPTGWRYEHLRACMGEGDASAEDETVPLPSLVSRMLAGNMPDSCTTTLSAARLFALMKDNGGVRPIAMGDVLWRWVTKAVCMENKLAFEEDFSPLQFAVGTLAGGEKTFRACQTYMETRRDDSGRRVLVTLDCKNAFNSIDRQSILDELGIKWPSFVDFFWQFY-GTPAELWYRMKDGRTETILSQEGTQQGDAAGPFLFCLGLHPALVKLQEEFPDDF-VSAFMDDIDGELDETRVTGYVDRAEQLLAEKKLRLRRDKS--------AAWSPRWQQDSDI-----PADIAASG-VKCSTEGITVLGCPLGGDYFIQHSLEKITSSHQPLLDAIVTFAQKGLQGSGLLLRYCASPRLNYWLRLLPSESDVSLAAAERHDAAIITAFRRMFRFPG-DFPASVSTQVQLPIRLEGFGLVSASTIARAAFLCSI 851
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4HXB0_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HXB0_9ALVE) HSP 1 Score: 194 bits (493), Expect = 2.130e-50 Identity = 143/440 (32.50%), Postives = 209/440 (47.50%), Query Frame = 1 Query: 1 ASRGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKE--DGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLG-LKAVLEKLHTQLSGP-----CAIMGLMDDVTVLLP----------SHEAE--EAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGW-PLHLGGMGLT 1257 A +GS+ G+ GWRYEHL L DG +A +++ L P LL G F LNK +VRPI D L R TR ++ ++ ++ HLGP+QFAV T G +KL CV+ + + L LDA NAFN DRQV MD + FP+L+ FFA +Y S +++R + G + +G QQGD AGP LFC+G LK L+ L L C + MDDV+++ P H+ AWR + A +GLTLR DKS + +QGL+ P + P G + G +L G G++ Y + ++L + L + G Q LL R C P+ Y R++ D A D + SQ D + + ++GI + + ++ + P + GG+GLT Sbjct: 850 APKGSAQGVTGWRYEHLSYFLPRDGSAQARILR-IATCLARGDAPVGFISLLAGGRCFALNKNARGTEVRPIVVGDVLRRWVTRAILLEFGVQFERHLGPLQFAVRTRAGIEKLFRCVQTCLQRSPSS----AVLNLDASNAFNAYDRQVIMDQVHAYFPQLYSFFA-LWYETPSDLVFRDQSGLLRRITCEEGVQQGDVAGPLLFCMGPLKPSLDGLLGDLQAKHGGRGCFVGAFMDDVSMVFPLCPFQQIPTDGHDDSILHAWRVSVARLQSFGLTLRPDKSSV-----------HSPSWQGLREY-PSAYPSPPGIIP-SLAGFRLCGAASGTTEYQRAHFDKKLKEARELSQAVEGYGDPQGAHLLFRFCVLPKLIYLTRIMG-DVIALDEW-SQADRELGESWARIIGIMEQEWAYGEVRNQAYLPQYQGGLGLT 1268
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4HVR7_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HVR7_9ALVE) HSP 1 Score: 192 bits (488), Expect = 9.720e-50 Identity = 135/432 (31.25%), Postives = 199/432 (46.06%), Query Frame = 1 Query: 22 GIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKE--DGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGP-----CAIMGLMDDVTVLLP----------SHEAE--EAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGW-PLHLGGMGLT 1257 G+ GWRYEHL L DG +A +++ L P LL G F LNK +VRPI D L R TR ++ ++ ++ HLGP+QFAV T G +KL CV+ + + L LD NAFN CDRQV +D + FP+L+ FFA +Y S +++R + G + +G QQGD AGP LFC+GLK L+ L L C + MDDV+++ P H+ AWR + A +GLTLR DKS + +QGL+ PS + G +L G+ G+ Y + ++L + L + G Q LL R C P+ Y R++ + SQ D + + ++GI + + ++ + P + GG+GLT Sbjct: 959 GVTGWRYEHLSYFLPRDGSAQARILR-IATCLARGDAPVGFISLLAGGRCFALNKNARGTEVRPIVVGDVLRRWTTRAILLEFGVQFERHLGPLQFAVRTRAGTEKLFRCVQTCLQRSPSS----AVLNLDVSNAFNACDRQVIIDQVHAHFPQLYSFFA-LWYGTPSDLVFRDQSGLLRRITCEEGVQQGDVAGPLLFCMGLKPSLDGLLGDLQAKHGGRGCFVGAFMDDVSMVFPLCPFQQIPTDGHDDSILHAWRVSAARLQSFGLTLRPDKSSV-----------HSPSWQGLREC--PSAYPSPPRIIPSLAGFRLCGVASGTIEYQSAHFDKKLKEERELSQAVEGYGDPQGAHLLFRFCVLPKLIYLIRIMGDVITLGEW--SQADGELGESCARIMGITEQEWAHGEIRNQAYLPQYQGGLGLT 1369
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4GRQ9_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GRQ9_9ALVE) HSP 1 Score: 186 bits (471), Expect = 3.620e-48 Identity = 140/443 (31.60%), Postives = 209/443 (47.18%), Query Frame = 1 Query: 1 ASRGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKE--DGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKL--THCVRAFMDQVEKGDTPYCA-LPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLK------AVLEKLHTQLSGP-CAIMGLMDDVTVLLP----------SHEAE--EAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLD-LSDQQLMQIGWPLHLGGMGL 1254 A +GS+ G+ GWRY+HL L DG +A ++ L P LL G F LNK +VRPI D L TR ++ ++ ++ HLGP+QFAV T G +KL CV+ ++ + +P A L LDA NAFN CDRQV M+ + FP+L+ FFA +Y S +++R + G +I +G QQGD GPFLFC+GLK A+L L + G C + MDD +++ P H+ AWR A +GLTLR DKS + +QGL+ P + P G + G +L G G++ Y + ++L + L + + G Q LL R C P+ Y R++ + SQ D + + ++G+ + + + Q P + GG+GL Sbjct: 45 APKGSAQGVTGWRYKHLSYFLPRDGSVQARILH-IATCLARGDAPVGFISLLAGGRCFALNKNARGTEVRPIVVGDVLRWWVTRAILLEFGIQFERHLGPLQFAVRTRAGTEKLFGIRCVQTYLQR-----SPSSAMLNLDASNAFNTCDRQVIMNQVYAHFPQLYSFFA-LWYRTPSDLVFRDQSGLLRRIICEEGVQQGDVVGPFLFCMGLKPSLDGLAMLGDLQAKHRGRGCFVGAFMDDASMVFPLCPFQQIPTDGHDDSILHAWRVDAARLQSFGLTLRPDKSSV-----------HSPSWQGLREC-PSAYPSPPG-ITPSLPGFRLCGAASGTTEYQSAHFDKKLREAWELSQAVEEYGDPQGAYLLFRFCVLPKLIYLTRIMGDVITLGEW--SQADRELGESWARIMGMTEQEWVYGEVRNQAYLPQYQGGLGL 465
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4FY66_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FY66_VITBC) HSP 1 Score: 185 bits (470), Expect = 1.620e-47 Identity = 135/438 (30.82%), Postives = 203/438 (46.35%), Query Frame = 1 Query: 1 ASRGSSPGIAGWRYEHLKALLEPDG-----GDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYCALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCA-IMGLMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVE-IDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMGSV--QDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTSQASLSRMAH 1287 A++G++PG +GWR+EHL L G+E ++ L+++ + +LL L K G VRP+ D + R TR + Q+K + + P+Q AVGTP G +KL F+ +G+ LD NAFN DRQ ++ L FPEL F QFY + + YR DG ++S QGTQQG+PAGPFLFCL L+ VL+ + Q S P A I M+D+T +A+ KA+ L L KSK T PP + P E E + G ++G + Y+ + L+ L L+ + + QD LL R+CA R YW RLLP ++ D V++ + G+ D ++ Q Q+ P+ G MG+T+ +++ A+ Sbjct: 139 AAKGAAPGPSGWRFEHLLGYLNLSKQGLWQGEERIPFPKIIRRLLSAKLSQLVTKLLGTANLMALTKGPGKVRPVAVGDAVRRWVTRAVCMQHKNKMAAYFAPLQCAVGTPAGNEKLFKAAETFIQSRREGEKRLLTT-LDCTNAFNEVDRQAIVNELASQFPELFHFLWQFY-GEPAKLWYRLADGRVRTILSQQGTQQGEPAGPFLFCLALQPVLKAI--QASFPRALIQAFMNDITPGADKSKADGVVDKAEEELQTISLKLARKKSKAYGPHWTDREP-------------PPDDLLPGFEREGLSSEGIDILGGAIWTDSYVANKLQSVLDSHRPLIERLKAFANEHRQDSSLLFRSCAVARLYYWLRLLPQRPSTTEVTALLRDEEVMNAAIAIHGLGEEDTTEPQRRQMALPVREGEMGITAASAILPAAY 559
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Match: A0A0G4GFY2_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GFY2_VITBC) HSP 1 Score: 181 bits (458), Expect = 9.160e-46 Identity = 146/459 (31.81%), Postives = 205/459 (44.66%), Query Frame = 1 Query: 1 ASRGSSPGIAGWRYEHLKALL-EPDGGDEAPLIQPFMQALVNSAVPGETRQLLRVGTGFLLNKEDGDVRPITTADTLWRTATRTLVFQYKERWRDHLGPMQFAVGTPNGCDKLTHCVRAFMDQVEKGDTPYC--------ALPLDAENAFNCCDRQVFMDALQKDFPELHGFFAQFYYHVESGIMYRGEDGTPHFVISSQGTQQGDPAGPFLFCLGLKAVLEKLHTQLSGPCAIMG-LMDDVTVLLPSHEAEEAWRKAKALFLEYGLTLRSDKSKLLPLDSTTTSNGRLEQFQGLKTLVPPSQVQPEGEVEIDRLGAKLVGIPYGSSHYIEDYLKQRLAKTHLLLTEIAKMG------SVQDQLLLLRACAHPRAAYWNRLLPPDYPAKDLFLSQHDNMVLDCLCTVLGINRLDLSDQQLMQIGWPLHLGGMGLTSQASLSRMAHCASIADSSGAIYQR 1329 A RGS+ G GWRYEHL+ L+ E +A + F+Q +++ +P +LL F L K G VRPI D L R TR L Q+K + + P QFAVGT G +KL + ++ Q + +P L LD NAFN RQ +D L P + FF QFY + + Y E G V S QG QQGD AGPFLFCL + L +L Q P A++G MDD + A+ F L LR DK + ++ P+ + G V G L+ P G+ ++E + + +A LL + +VQ LLLR C PR YW RLL P P+ HD + + L LS ++ +Q+ P+ LGG GL S A ++ A+ S+A + G ++ R Sbjct: 1375 APRGSAAGPTGWRYEHLQVLVGEAHTNADAVPVLKFVQRMLDGDLPPVVTKLLAAARLFALEKPGGGVRPIAIGDALRRWVTRALCLQHKLEFEEEFRPHQFAVGTSAGGEKLFRTAQTYI-QTQDAASPDADGPPLTRTLLSLDCRNAFNEISRQRIVDELAAKHPAMVAFFWQFY-GTAAPLWYTMEGGRVETVHSRQGVQQGDVAGPFLFCLAFQPALRRL--QEGFPDALVGGFMDDGLGGMDESSVPSFLTAAEEAFRAINLVLRLDKCHAWSPHWRSAAD-------------VPTAITRRG-VRASTEGIILLSAPIGTPAFVERTVNEVVASHQRLLDAVVAFAVNDGDYAVQGANLLLRYCGSPRFLYWCRLLAPS-PSVLAAARAHDAAKVAAFAHIQRTGALSLSARRQVQL--PIRLGGFGLVSSARVAPAAYLGSVAATVGDVWDR 1812 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1051.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1051.9.1 >prot_H-akashiwo_Contig1051.9.1 ID=prot_H-akashiwo_Contig1051.9.1|Name=mRNA_H-akashiwo_Contig1051.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=444bp ASRGSSPGIAGWRYEHLKALLEPDGGDEAPLIQPFMQALVNSAVPGETRQback to top mRNA from alignment at H-akashiwo_Contig1051:401773..403104+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1051.9.1 ID=mRNA_H-akashiwo_Contig1051.9.1|Name=mRNA_H-akashiwo_Contig1051.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1332bp|location=Sequence derived from alignment at H-akashiwo_Contig1051:401773..403104+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1051:401773..403104+ >mRNA_H-akashiwo_Contig1051.9.1 ID=mRNA_H-akashiwo_Contig1051.9.1|Name=mRNA_H-akashiwo_Contig1051.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1332bp|location=Sequence derived from alignment at H-akashiwo_Contig1051:401773..403104+ (Heterosigma akashiwo CCMP452)back to top |