mRNA_H-akashiwo_Contig1051.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: A0A835YKI5_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI5_9STRA) HSP 1 Score: 223 bits (567), Expect = 5.710e-67 Identity = 121/157 (77.07%), Postives = 129/157 (82.17%), Query Frame = 1 Query: 115 PFTVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAH------SPGGGRGVP---FPFLALLTSGGHLQLLLCEDVG 558 PFTVLGIETSCDDTGAAVVRSDG ILGEALASQ IH +WGGVVPGLA ++H EIDR+VAAALA+AG+ASAA+VDAVAVT GPGLEICLRVGCE AKALALEH KPFVAVHHLEAH G G+ FPFLALL SGGH QLLLCE VG Sbjct: 18 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVG 174
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: A0A1Z5K725_FISSO (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K725_FISSO) HSP 1 Score: 210 bits (535), Expect = 1.860e-61 Identity = 120/196 (61.22%), Postives = 140/196 (71.43%), Query Frame = 1 Query: 1 GKPKGVEGGKIMASKYRPPDIALPEPPVALSGLPDLSRPFTVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAHS-------PGGGRGVPFPFLALLTSGGHLQLLLCEDVGGSA 567 G PK V+ G+ A+ YRP D + ALSGLP + FTVLGIE+SCDDTGAAVVRSDG ILGEALASQ+ IHA WGGVVPGLA ++H+ EIDR+V AL AG+ SAA+VDA+ VT GPGLEICLRVG A+ALA+E+ KPFV VHHLEAH + + FPFLALL SGGH QLL C +G A Sbjct: 77 GLPKAVDRGQF-ATTYRPFDGHSFQ---ALSGLPPNLQNFTVLGIESSCDDTGAAVVRSDGTILGEALASQSHIHAPWGGVVPGLAKEAHEAEIDRIVQEALEAAGMTSAADVDAIGVTVGPGLEICLRVGATKARALAIEYQKPFVGVHHLEAHILMARLPYDSASKQLEFPFLALLVSGGHCQLLKCTGIGDMA 268
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: A0A7S2V5H1_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5H1_9STRA) HSP 1 Score: 211 bits (538), Expect = 2.160e-61 Identity = 122/206 (59.22%), Postives = 135/206 (65.53%), Query Frame = 1 Query: 1 GKPKGVEGGKIMASKYRPPDIALPEPPVALSGLPDLSRPFTVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAHS-----PGGGRGVP---------------FPFLALLTSGGHLQLLLCEDVG 558 G K VE + SK+ PP + +PP A SGLPDL++PFTVLGIETSCDDTG AVVRSDG ILGEA+ QA IHAEWGGVVP LAM +H+ I V AL RAGL S A+VDA+ VT GPGLE+CLRVG AAKALALEH PFV VHHLEAH P P +PFLALL SGGH QLLL E G Sbjct: 77 GLAKSVEREGVY-SKFNPPSVFPSDPPEAKSGLPDLTKPFTVLGIETSCDDTGVAVVRSDGAILGEAVVGQADIHAEWGGVVPNLAMDAHKSAIQSTVQLALERAGLKSPADVDAIGVTVGPGLEVCLRVGAGAAKALALEHRLPFVGVHHLEAHCLMARIPSSPLVPPTPYQDQKELVEDELVYPFLALLVSGGHCQLLLVEGAG 281
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: A0A7S4J610_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J610_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.120e-58 Identity = 112/207 (54.11%), Postives = 135/207 (65.22%), Query Frame = 1 Query: 4 KPKGVEGGKIMASKYRPPDIALPEPPVALSGLPDLSRPFTVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAH----------------SPG------GGRGVPFPFLALLTSGGHLQLLLCEDVG 558 KP G +GG A +SGLPD ++PFTVLGIE+SCDDTGAAVVRSDG ILGEALASQ +IH EWGG+VPGLA +H+++ID ++ AL AG++S +VDA+ VT GPGLEICLRVGC A+ LA ++GKPFV +HHLEAH SP R + FPFLALL SGGH QLL C D+G Sbjct: 129 KPGGEDGGTFTA----------------ISGLPDRTKPFTVLGIESSCDDTGAAVVRSDGVILGEALASQHEIHEEWGGIVPGLARTAHEEKIDGIIHEALQNAGMSSVEDVDAIGVTVGPGLEICLRVGCNKARDLAEKYGKPFVGIHHLEAHILMARLPYGDSDDLFISPATEDMHEAARAIEFPFLALLVSGGHCQLLKCLDIG 319
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: A0A7S2RZ45_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZ45_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.400e-57 Identity = 108/180 (60.00%), Postives = 126/180 (70.00%), Query Frame = 1 Query: 82 VALSGLPDLSRPFTVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAH---------------------SPGGGRGVPFPFLALLTSGGHLQLLLCEDVG 558 VA SGLPD +RPFTVLGIE+SCDDTGAAVVRSDG ILGE+LASQ KIH EWGGVVPGLA +H+++ID V+ A+ AGL+S E+DA+ VT GPGLEICLRVGC A+ LA++ KPFVA+HHLEAH S + FPFLALL SGGH Q+L C VG Sbjct: 59 VAKSGLPDKTRPFTVLGIESSCDDTGAAVVRSDGVILGESLASQHKIHEEWGGVVPGLAKLAHEEKIDVVIEEAIQNAGLSSIDEIDAIGVTVGPGLEICLRVGCNKARELAIQFQKPFVAIHHLEAHILMARLPPQKKEQQSTSIDIVSHESNCAIQFPFLALLVSGGHCQMLKCLGVG 238
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: R1CZN8_EMIHU (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZN8_EMIHU) HSP 1 Score: 196 bits (497), Expect = 5.710e-56 Identity = 106/155 (68.39%), Postives = 115/155 (74.19%), Query Frame = 1 Query: 106 LSRPFTVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAHSPGGGRGV----PFPFLALLTSGGHLQLLLCEDVG 558 L PFTVLGIETSCDDTG AVVRSDG ILGEA+ASQA++H WGGVVPG+A +H+ + V AL RAGL+SAAEVDAVAVT GPGLEICLRVGCE A LA HGK FVAVHHLEAH PFPFL LLTSGGH QLLL +G Sbjct: 60 LREPFTVLGIETSCDDTGVAVVRSDGEILGEAIASQAELHEAWGGVVPGIARDAHRDALGGAVELALRRAGLSSAAEVDAVAVTVGPGLEICLRVGCEEAVRLATAHGKAFVAVHHLEAHVLMARLACHPPPPFPFLTLLTSGGHCQLLLTRGIG 214
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: A0A7S2YT17_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YT17_9STRA) HSP 1 Score: 195 bits (495), Expect = 3.590e-55 Identity = 106/182 (58.24%), Postives = 125/182 (68.68%), Query Frame = 1 Query: 85 ALSGLPDLSRPFTVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAH------------------------SPGGGRGVPFPFLALLTSGGHLQLLLCEDVG 558 A+SGLPD ++ FTVLGIE+SCDDTGAAVVRSDG ILGEALASQ +IH +WGGVVPGLA +HQ++ID VV+ AL AG++SAAEVDA+ VT GPGLEICLRVG A LA E+ KPFV +HHLEAH + R + FPF ALL SGGH Q++ C VG Sbjct: 115 AISGLPDRTKLFTVLGIESSCDDTGAAVVRSDGVILGEALASQQEIHEQWGGVVPGLARDAHQEQIDSVVSQALTNAGMSSAAEVDAIGVTVGPGLEICLRVGSTKAIQLASEYQKPFVGIHHLEAHILMARLPSSISNEEELIHITATEDTHASTRAIEFPFFALLVSGGHCQMMRCSGVG 296
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: K0T4A1_THAOC (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T4A1_THAOC) HSP 1 Score: 194 bits (494), Expect = 4.020e-55 Identity = 109/199 (54.77%), Postives = 130/199 (65.33%), Query Frame = 1 Query: 4 KPKGVEGGKIMASKYRPPDIALPEPPVALSGLPDLSRPFTVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAH--------------SPGGGRGVPFPFLALLTSGGHLQLLLCEDVG 558 +P G +GG +A SGLP ++ PF VLGIE+SCDDTGAA++RSDG ILGE+LASQ IH EWGGVVPGLA +H+Q IDRVV +L RAG+ +VDA+ VT GPGLEICLRVGCE AK LA+++ KPFV VHHLEAH P R + FPFLALL SGGH Q+L C +G Sbjct: 108 RPGGADGGSFVAK----------------SGLP-VNEPFCVLGIESSCDDTGAAIIRSDGVILGESLASQHSIHEEWGGVVPGLAKTAHEQNIDRVVNESLQRAGM-QIQDVDAIGVTVGPGLEICLRVGCEKAKELAIQNKKPFVGVHHLEAHILMARLPKDHNQTDQPAEDRSMEFPFLALLVSGGHCQILKCIGIG 288
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: R1CZA0_EMIHU (N(6)-L-threonylcarbamoyladenine synthase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZA0_EMIHU) HSP 1 Score: 189 bits (480), Expect = 8.830e-55 Identity = 103/150 (68.67%), Postives = 112/150 (74.67%), Query Frame = 1 Query: 121 TVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAHSPGGGRGV----PFPFLALLTSGGHLQLLLCEDVG 558 TVLGIETSCDDTG AVVRSDG ILGEA+ASQA++H WGGVVPG+A +H+ + V AL RAGL+SAAEVDAVAVT GPGLEICLRVGCE A LA HGK FVAVHHLEAH PFPFL LLTSGGH QLLL +G Sbjct: 1 TVLGIETSCDDTGVAVVRSDGEILGEAIASQAELHEAWGGVVPGIARDAHRDALGGAVELALRRAGLSSAAEVDAVAVTVGPGLEICLRVGCEEAVRLATAHGKAFVAVHHLEAHVLMARLACHPPPPFPFLTLLTSGGHCQLLLTRGIG 150
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Match: D8LIT8_ECTSI (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIT8_ECTSI) HSP 1 Score: 194 bits (492), Expect = 2.940e-53 Identity = 103/152 (67.76%), Postives = 115/152 (75.66%), Query Frame = 1 Query: 13 GVEGGKIMASKYRPPDIALPEPPVALSGLPDLSRPFTVLGIETSCDDTGAAVVRSDGRILGEALASQAKIHAEWGGVVPGLAMKSHQQEIDRVVAAALARAGLASAAEVDAVAVTAGPGLEICLRVGCEAAKALALEHGKPFVAVHHLEAHS 468 G K+ PP ALSGLPD+S+PFTVLGIETSCDDT AAVVRSDG +LGEA+A QA +H EWGGVVPGLA SH ++D VV AL +AGL SAAEVDAVAVT GPGLEICLRVG E AKALA E+GKPFVA+HHLEAH+ Sbjct: 30 GTSTEKVGLEALHPPQGPPGSGAPALSGLPDVSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALEQAGLGSAAEVDAVAVTVGPGLEICLRVGAEKAKALAAEYGKPFVAIHHLEAHA 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1051.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1051.2.1 >prot_H-akashiwo_Contig1051.2.1 ID=prot_H-akashiwo_Contig1051.2.1|Name=mRNA_H-akashiwo_Contig1051.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=241bp MASKYRPPDIALPEPPVALSGLPDLSRPFTVLGIETSCDDTGAAVVRSDGback to top mRNA from alignment at H-akashiwo_Contig1051:125211..126633+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1051.2.1 ID=mRNA_H-akashiwo_Contig1051.2.1|Name=mRNA_H-akashiwo_Contig1051.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1423bp|location=Sequence derived from alignment at H-akashiwo_Contig1051:125211..126633+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1051:125211..126633+ >mRNA_H-akashiwo_Contig1051.2.1 ID=mRNA_H-akashiwo_Contig1051.2.1|Name=mRNA_H-akashiwo_Contig1051.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=723bp|location=Sequence derived from alignment at H-akashiwo_Contig1051:125211..126633+ (Heterosigma akashiwo CCMP452)back to top |