mRNA_H-akashiwo_Contig105.7.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: A0A6V1PDI6_HETAK (Histidine kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PDI6_HETAK) HSP 1 Score: 235 bits (599), Expect = 8.520e-71 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1 Query: 1 PNDHKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLKMDLEAAKKGPGSAREGGPGSGRAPAAGTAATAEWAARRDAV 366 PNDHKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLKMDLEAAKKGPGSAREGGPGSGRAPAAGTAATAEWAARRDAV Sbjct: 556 PNDHKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLKMDLEAAKKGPGSAREGGPGSGRAPAAGTAATAEWAARRDAV 677
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: A0A2H6AE74_9BACT (Histidine kinase n=1 Tax=bacterium HR36 TaxID=2035431 RepID=A0A2H6AE74_9BACT) HSP 1 Score: 115 bits (289), Expect = 1.390e-27 Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 1 Query: 4 NDHKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLKM 246 NDH LLLFSVRDTGIGI + +F+AFEQ D+ TTR+YGG+GLGLAI LV LMGGRIWVESE GQGSTF+FTA L++ Sbjct: 797 NDHALLLFSVRDTGIGIPRDKQERIFQAFEQVDTSTTRRYGGTGLGLAIASKLVGLMGGRIWVESEPGQGSTFYFTARLEV 877
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: A0A2N2VUA7_9BACT (Hybrid sensor histidine kinase/response regulator (Fragment) n=2 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2N2VUA7_9BACT) HSP 1 Score: 110 bits (274), Expect = 6.600e-26 Identity = 53/78 (67.95%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 10 HKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLK 243 H+ L FSVRD+GIGIAK + +F+AF Q DS TTR+YGG+GLGLAI K L+ELMGGR+WVES VG+GSTFFFT L+ Sbjct: 204 HQELQFSVRDSGIGIAKDKIDIMFEAFTQADSSTTRRYGGTGLGLAIAKHLIELMGGRVWVESTVGKGSTFFFTIKLR 281
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: A0A3M1RNE5_9BACT (Histidine kinase n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A3M1RNE5_9BACT) HSP 1 Score: 109 bits (273), Expect = 1.940e-25 Identity = 55/88 (62.50%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 1 PNDHKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLKMDLEAAK 264 P+D LL F+VRDTGIGI +F F Q D TTR+YGG+GLGLAITK LVE+MGGRIWVES VGQGSTF FTAL + + K Sbjct: 452 PSDQVLLHFAVRDTGIGIPPEKQQIIFNPFTQADGSTTRRYGGTGLGLAITKQLVEMMGGRIWVESRVGQGSTFHFTALFRRQQQVEK 539
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: A0A644TS00_9ZZZZ (Signal transduction histidine-protein kinase BarA n=6 Tax=root TaxID=1 RepID=A0A644TS00_9ZZZZ) HSP 1 Score: 108 bits (271), Expect = 2.900e-25 Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 1 Query: 10 HKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLK 243 ++ L FSVRD+GIGI K +G LF AF Q DS TTR+YGG+GLGLAI K LVELM GRIWVESEVG+GSTFFFT L+ Sbjct: 204 YQELQFSVRDSGIGIPKEKIGILFDAFTQADSTTTRRYGGTGLGLAIAKHLVELMDGRIWVESEVGKGSTFFFTIRLR 281
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: A0A0F3GZN9_9BACT (Membrane protein containing ATP-binding region, ATPase-like protein n=1 Tax=Candidatus Magnetobacterium bavaricum TaxID=29290 RepID=A0A0F3GZN9_9BACT) HSP 1 Score: 108 bits (271), Expect = 3.490e-25 Identity = 53/75 (70.67%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 19 LLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLK 243 ++FSVRDTGIGIA LG++F++F+Q DS TTRKYGG+GLGL+I+K LVELM G IWVES +GQGSTFFFTA L+ Sbjct: 552 IMFSVRDTGIGIATDKLGTVFESFKQADSSTTRKYGGTGLGLSISKRLVELMDGTIWVESVLGQGSTFFFTARLE 626
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: A0A6M0S8A2_9CYAN (Response regulator n=3 Tax=Leptolyngbyaceae TaxID=1890438 RepID=A0A6M0S8A2_9CYAN) HSP 1 Score: 108 bits (270), Expect = 5.000e-25 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 10 HKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLKMDLE 255 H+ L F+V+DTGIGI + LFKAF Q DS TTRKYGG+GLGLAI K L E+MGG+IWVES+ QGSTFFFT L+ +E Sbjct: 524 HQSLCFAVKDTGIGIPTQRIARLFKAFSQVDSSTTRKYGGTGLGLAICKQLTEMMGGKIWVESQADQGSTFFFTITLQTTVE 605
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: U9W3Z8_9CYAN (Multi-sensor hybrid histidine kinase n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9W3Z8_9CYAN) HSP 1 Score: 108 bits (270), Expect = 5.000e-25 Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 10 HKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLKMDLE 255 H+ L F+V+DTGIGI + LFKAF Q DS TTRKYGG+GLGLAI K LVE+MGG IWV+S+V QGSTFFFT ++ LE Sbjct: 524 HQSLCFAVKDTGIGIPAQRIERLFKAFSQVDSSTTRKYGGTGLGLAICKQLVEMMGGNIWVDSQVDQGSTFFFTVTVQTVLE 605
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: A0A4Q0T684_9BACT (Multi-sensor hybrid histidine kinase n=1 Tax=Granulicella sibirica TaxID=2479048 RepID=A0A4Q0T684_9BACT) HSP 1 Score: 107 bits (268), Expect = 8.560e-25 Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 19 LLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALL 240 LLF VRDTGIGI LGS+F+ F Q DS TTRKYGG+GLGLAI++ LVE+MGGRIWVES VGQGSTF FT L Sbjct: 309 LLFRVRDTGIGIPPEKLGSIFENFSQADSSTTRKYGGTGLGLAISRRLVEMMGGRIWVESIVGQGSTFLFTVKL 382
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Match: A0A3A5AT11_9DELT (Histidine kinase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A5AT11_9DELT) HSP 1 Score: 107 bits (268), Expect = 9.590e-25 Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 1 Query: 19 LLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAITKSLVELMGGRIWVESEVGQGSTFFFTALLKMDLEAA 261 LLFSVRDTGIGI+ +F++F Q DS TTR+YGG+GLGL I+K LVE MGGRIWVESE+G+GSTFFFT L +D + A Sbjct: 1795 LLFSVRDTGIGISSEKQQEIFRSFTQADSSTTRQYGGTGLGLTISKHLVEKMGGRIWVESELGKGSTFFFTTQLPIDNDGA 1875 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig105.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig105.7.1 >prot_H-akashiwo_Contig105.7.1 ID=prot_H-akashiwo_Contig105.7.1|Name=mRNA_H-akashiwo_Contig105.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=122bp PNDHKLLLFSVRDTGIGIAKAFLGSLFKAFEQQDSKTTRKYGGSGLGLAIback to top mRNA from alignment at H-akashiwo_Contig105:673519..674465+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig105.7.1 ID=mRNA_H-akashiwo_Contig105.7.1|Name=mRNA_H-akashiwo_Contig105.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=947bp|location=Sequence derived from alignment at H-akashiwo_Contig105:673519..674465+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig105:673519..674465+ >mRNA_H-akashiwo_Contig105.7.1 ID=mRNA_H-akashiwo_Contig105.7.1|Name=mRNA_H-akashiwo_Contig105.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=366bp|location=Sequence derived from alignment at H-akashiwo_Contig105:673519..674465+ (Heterosigma akashiwo CCMP452)back to top |