mRNA_H-akashiwo_Contig1048.5.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1048.5.1
Unique NamemRNA_H-akashiwo_Contig1048.5.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK)

HSP 1 Score: 328 bits (840), Expect = 4.340e-103
Identity = 162/278 (58.27%), Postives = 207/278 (74.46%), Query Frame = 1
Query:  250 MENWVRHFAELSGFKPDHKESIMSDDDLGGPGQCGSVPEGVKIELPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRRGCHEQSFLLLSSLYSAKRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNLFIDELVKILAE 1083
            M+ W  HF+ LS  K    +S+   D +GG          V  +LP  I+REMI   I+ LK RKA+GID + NEI+I+SA +I+  L  LFN++L +RYFP  WN+VMI+PLFKS D NDTNNYRGISLLSCLGKLF +I+N+++ ++++ A LLSDLQGGF R+RGC EQSFLLLS+L +A RRR  R  CAFVDFRKAYD+V+HS+LW RL SLG+GPKL ELL+SIY KV+C+VR    LS  F Y +GVRQGC+LSP++FNLFIDELV ++ +
Sbjct:    1 MDEWFEHFSALS--KDPDGDSVPLQDSVGGR---------VVFDLPNRITREMIEHQIRKLKRRKAAGIDAVYNEILIYSASFIIGALETLFNEVLKTRYFPSTWNVVMISPLFKSDDPNDTNNYRGISLLSCLGKLFCSIINEFVYTQVESAHLLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELVNVIQQ 267          
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: UPI001E1E0690 (uncharacterized protein LOC123560678 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0690)

HSP 1 Score: 202 bits (514), Expect = 2.480e-54
Identity = 130/370 (35.14%), Postives = 200/370 (54.05%), Query Frame = 1
Query:    1 RWFDSECYTQKKIVRNMLNKFGVSSEEY---RNEF---------KKFRALCKKKKRNFNARIGSTLNNLSNDNPKEFWRVLRSGRVQSQPTVEIPMENWVRHFAELSGFKPDHKESIMSDDDLGGPGQCGSVPEGVKIE-LPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRRGCHEQSFLLLS--SLYSAKRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNLFIDEL 1065
            +WFD+EC       +  L K+  S E Y   RNE          K ++   KK KR FN +    +N +    P+EFW + R+   QS  +  I ME +  HF  L+    D    +   +D     +   V +   +E +   I+++ I +    LK  K+SGID I NE  I +   + D L +LFN +L S  FP+QW   +I PL K     DTNNYRGI+L SC GKLF+++LN+ L +       L+D Q GF       +  F+L S  +LY++K +   R++ AFVD++KAYDT+  + LW +L+  G+  K+++LL+S+Y  V+  V+H  +LS FF   +G+ QG + SP++F+ FI++L
Sbjct:  234 KWFDNEC-------KEKLQKYKESIEHYTCRRNEENFIYMKQCRKDYKYCVKKCKRQFNLKRAREMNEMRRKKPREFWNMFRAKGKQS--SENISMEEFYTHFKNLAAGTDDVNPDV---EDFMEHFEHRDVTQDEPLETIDLPITQDEIRKACSKLKRNKSSGIDCIINEYFIETIDILSDSLEILFNSILESGKFPKQWTQGVIVPLLKKPPATDTNNYRGITLTSCFGKLFTSVLNERLKNWAIENERLTDAQFGFRSGHSTTDAMFILQSLINLYNSKNK---RLYAAFVDYQKAYDTIYRNGLWYKLIREGVDGKMLKLLRSMYEDVQSCVKHMNSLSDFFSCDMGLFQGEITSPILFSFFINDL 588          
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: A0A3C1S4H7_9FLAO (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A3C1S4H7_9FLAO)

HSP 1 Score: 201 bits (511), Expect = 4.480e-54
Identity = 124/372 (33.33%), Postives = 198/372 (53.23%), Query Frame = 1
Query:    4 WFDSECYTQKKIVRNMLNK-FGVSSEEYRNEF--------KKFRALCKKKKRNFNARIGSTLNNLSNDNPKEFWRVLRSGRVQSQPTVEIPMENWVRHFAELSGFKPDHKESIMSDDDLGGPGQCGSVPEGVKIELPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKS-GDQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRRGCHEQSFLL--LSSLYSAKRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNLFIDELVKILAE 1083
            WFD EC +++K      N  +G  S++ R           K+++    K + NF   I   L    + +PK FW++L+S   QS+    I ++++++HF EL+    +  +S    +DL          +G   EL    + + I + IK LK  K+ GID I NE +      + + +  LFN +L S   P  W + +I PLFK+ GD ND NNYRGI+LLS LGKLF++ +NQ L+  ++    L + Q GF          F+L  +   Y  K++   R++CAF+D+ KA+D +  S LW +LL +G+  K++ ++ ++Y   K  VR   NLS FF   VGVRQG  LSPL+F +++++    +A+
Sbjct:  206 WFDEECESKRKAYMETKNAGYGKKSKQARKAHREILKHVEKEYKNFIAKTQNNFRINIAKVLKEAKSKDPKCFWKILKSKNSQSKKDGNISLQSFMQHFQELNNLTSEQSDSEFKKEDLS---------QGNNEELNRDFNVDEIEKLIKKLKTGKSCGIDNIINEYLKKCPTSMKNAIVSLFNLVLKSGIVPSDWCIGIIIPLFKNKGDINDVNNYRGITLLSVLGKLFTSAINQRLTKFLEGISALGEDQAGFREGYSTLNHIFVLHCIIDFYLQKKK---RLYCAFIDYSKAFDLINRSTLWIKLLGIGVKGKIINVIYNLYDSAKSCVRKCNNLSDFFHCNVGVRQGENLSPLLFAIYLNDFESFVAQ 565          
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: A0A6S7HH85_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HH85_PARCT)

HSP 1 Score: 199 bits (505), Expect = 1.560e-53
Identity = 128/372 (34.41%), Postives = 202/372 (54.30%), Query Frame = 1
Query:    4 WFDSECYTQKKIVRNM---LNKFGVSSEEYRNEF----KKFRALCKKKKRNFNARIGSTLNNLSNDNPKEFWRVLRSGRVQSQPTV-EIPMENWVRHFAELSGFK-----PDHKESIMSDDDLGGPGQCGSVPEGVKIELPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRRGCHEQSFLLLSSL--YSAKRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNLFIDELVKI 1074
            W+D  C+  KK +RN+   L+KF  +    R+ F    K+++   KK+KR F+  I + +  LS +NPK+FW+++ S + Q   T  EI    W  +F  L+           +  I+ D ++   G   ++   V +E    +S        K LK++KAS  D + NEII  +   +      LFNK+L + +FP  W+   I P++KSG   D NNYRGI + SCLGK F+ I+N+ L+  +D   ++S+ Q GF R+        L+L +L  Y   +R+P  +F  F+DF+KAYD+V    L+ +L+  G   + + L+ S+Y+   CSV+     ++FF   VGV+QGC LSP +FNLFI++L  I
Sbjct:  372 WYDGNCHNLKKNLRNLGSLLSKFP-NDIYLRHLFFAKKKEYKRTVKKQKRQFHNSILNKIELLSENNPKDFWKLVNSIKAQKPRTSHEILPSEWFDYFKNLNKININTEVASSEAQIIKDFNIWALGTNDTLDRPVSLEEVYKLS--------KRLKNKKASANDSLSNEIIKLAVEVMPSYFEKLFNKILSNGHFPSLWSKGFIVPIYKSGSNIDPNNYRGICISSCLGKFFTLIMNERLNKYLDENNIMSNCQIGF-RKNYRTADHLLVLKTLIDYYKSKRKP--IFACFIDFKKAYDSVWRESLFFKLILNGCSKRFIRLMLSMYSSYDCSVKLEEGYTTFFRSHVGVKQGCNLSPTLFNLFINDLPDI 731          
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: A0A6S7JHZ6_PARCT (Reverse transcriptase domain-containing protein n=7 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JHZ6_PARCT)

HSP 1 Score: 199 bits (505), Expect = 5.480e-53
Identity = 125/377 (33.16%), Postives = 196/377 (51.99%), Query Frame = 1
Query:    1 RWFDSECYTQKKIVRNMLN---KFGVSSE---EYRNEFKKFRALCKKKKRNFNARIGSTLNNLSNDNPKEFWRVLRSGRVQ----SQPTVEIPMENWVRHFAELSGFKPDHKESIMSDDDLGGPGQCGSVPEGVKIE--------LPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRRGCHEQSFLLLSSLYS-AKRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNLFIDELVKI 1074
            +WFD EC  ++  VR + N   +  ++SE   +Y    K ++   K KK  F+ +    L   +  +P  FW+ L++        S  + +I  + W+ HF  L      H +  +      GP Q G +     +E        L   I+ + II     LKH+K++  D I+NE+I FS   +L   H LFN +L    FPE+W   ++ P+FKSGD+ D NNYRGI + SC+GK F  ILN+ L+       L+   Q GF       +  F L + +     + +  +++  FVDF+KA+D+V H  L+++LL   +G     L+KS+Y+  KC+V+   + ++FF Y  GVRQGC LSPL+FNL+I+EL  +
Sbjct:  378 KWFDKECRLKRHFVRKLANQKHRDPLNSEIRKKYHEALKIYKDTLKHKKEIFHEKKLEDLEIAAETDPNSFWKNLKNMSDSCDDLSSSSTQITNQKWISHFENL------HTKHNL------GPKQEGILKNLELLENNIDDNNTLDDPITEDDIISAATKLKHKKSAYSDRIRNEMIKFSVNILLKGYHKLFNMILECGIFPEKWCEGLLTPIFKSGDKQDPNNYRGICVTSCIGKFFCLILNKRLNDFTQENNLVHHSQIGFQSGHRTADHVFTLKTLIDKHVTQNKNNKIYACFVDFKKAFDSVWHEGLYSKLLKYKIGGNFYRLIKSLYSNSKCAVKLSKSRTTFFPYSKGVRQGCTLSPLLFNLYINELTTL 742          
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: UPI001E1E1F32 (uncharacterized protein LOC123553993 isoform X1 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1F32)

HSP 1 Score: 196 bits (499), Expect = 2.230e-52
Identity = 122/373 (32.71%), Postives = 198/373 (53.08%), Query Frame = 1
Query:    4 WFDSECYTQKKIVRNMLNKFGVSSEE--------YRNEFKKFRALCKKKKRNFNARIGSTLNNLSNDNPKEFWRVLRSGRVQSQPTVEIPMENWVRHFAELSGFKPDHK----ESIMSDDDLGGPGQCGSVPEGVKIELPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRRGCHE-QSFLLLSSLYSAKRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNLFIDELVKILAE 1083
            WFD+EC   K+I  + +NK+ +   +        Y+  +K    L K KKR +       +  L + NP+EFW+        +     I +  + + F+ L+   P+ +    E    + D GG   C      V  EL   I+   I   I +LK  K+   D + NE  I S   +L  L  +FN +L S +FP+ W   +I PLFK  D +D NNYRGI+L+SC  K+F+ +LN+ +S+ I+   ++SD Q GF  R+GC    +  +L+++ S      GR+ CAF+DF KA+D++  + LW +L  LG+    + +++ +Y+KVK  +R   + S FF   +G++QG V+SPL+F+LF+++L   L E
Sbjct:  184 WFDNECLNAKQIYVSSVNKYNMCKNDANRIEMCTYKTTYKN---LIKTKKRRYELNKIRNIERLRHCNPREFWKHFSRKNTSNN---SISINEFYKFFSGLNAQLPNDRNIDAEQFCDNHDFGG-NDC------VYDELDMPITASEIQAVISNLKRNKSFAGDQLLNEYFIESCDILLSHLVDIFNSILGSGFFPDSWMEGIIVPLFKKNDPSDVNNYRGITLVSCFSKIFTGVLNKRISNWIESNNIISDAQFGF--RKGCSTVDAIFVLNAIISKVLSENGRLACAFIDFSKAFDSIYRNGLWYKLHQLGITGNTLRIIRDMYSKVKACIRGCKSYSDFFECSMGLKQGEVISPLLFSLFLEDLELYLLE 541          
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: A0A4W5Q2H4_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5Q2H4_9TELE)

HSP 1 Score: 192 bits (489), Expect = 2.370e-52
Identity = 119/370 (32.16%), Postives = 201/370 (54.32%), Query Frame = 1
Query:    1 RWFDSECYTQKKIVRNMLNKFGVSSE------EYRNEFKKFRALCKKKKRNFNARIGSTLNNLSNDNPKEFWRVLRSGRVQSQPTVEIPMEN-WVRHFAELS---GFKPDHKESIMSDDDLGGPGQCGSVPEGVKIELPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRRGCHEQSFLLLSSLYS-AKRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNLFIDELVKIL 1077
            +WFD+EC T +K +R M N+            EY    K+++   K+KK N+  +    + N  + N  +FW +  +        + I  E  W  +F  L      K   +  +   + L       SV +  +  L   IS++ +   +K +K +KA G+D I+NE++  S P + + +  LFN +L S  FP+ WN  +I+P+ KSGD++D NNYRGI + S LGK+F +ILN  + + +   +L+S  Q GF       +  + L + +   A +++ G++F  F+DF+KA+D++ H  L+ R+L  G+G K+ +L+K +YT+ KC+++     + FF    GVRQGC LSP +FN++I+EL  +L
Sbjct:  157 KWFDNECKTIRKHLRQMSNEKHKQQNNPDLRCEYFETLKQYKHTLKRKKLNYTNKTLDEIENAIDQN--QFWDMWNNLSTTKPQELAIQDEGIWKTYFDNLYKNISQKDLQQNQLEIQEKLN---ILESVIKNNQNPLDYPISQQELNEKLKSIKSKKACGLDNIRNEMLKNSTPELQNAVLKLFNMVLTSGCFPDVWNQGLISPIHKSGDKSDPNNYRGICVNSNLGKVFCSILNSRIQTFLQEKKLISKCQIGFLPNHRTTDHIYTLHTLINKHAHQKKEGKIFACFIDFKKAFDSIWHEGLFYRILQTGLGGKVYDLIKCMYTENKCAIKIKNQRTEFFSQSRGVRQGCSLSPNLFNIYINELADML 521          
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: A0A6S7IA75_PARCT (Reverse transcriptase domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IA75_PARCT)

HSP 1 Score: 194 bits (493), Expect = 3.380e-52
Identity = 130/372 (34.95%), Postives = 194/372 (52.15%), Query Frame = 1
Query:    1 RWFDSECYTQKKIVRNMLN---KFGVSSE---EYRNEFKKFRALCKKKKRNFNARIGSTLNNLSNDNPKEFWRVLRSGRVQ----SQPTVEIPMENWVRHFAELSGFKP--DHKESIMSDDDLGGPGQCGSVPEGVKIELPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRRGCHEQSFLLLSSLYSA--KRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNLFIDELVKI 1074
            +WFD EC  ++  VR + N   +  +++E   EY N  + ++   K KK  F+    + L   S  +   FW  L++        S  + +I  +NW  HF +L         +E+I+   D+       +  E   ++ P  IS   I+   K LK+RK++  D IKNE+I  S   +L   + LFN +L    FP+QW   +I P+FKSGD+NDTNNYRGI + SCL K F  ILN+ L+       L+   Q GF       +  F L  +L+       R  +V+  FVDF+KA+D+V H  L+ +LL   +      L+KS+Y   KC+V+   + + FF Y  GVRQGCVLSP++FNL+I+EL  I
Sbjct:   75 KWFDKECRLKRHSVRKLANQKHRDPLNNEIRNEYHNALRIYKDTLKHKKELFHENKLNELERASETDSSLFWNTLKNMSDSYDDFSSSSPDITTQNWFSHFKQLHAKHNLGTEQENILQQLDM----LKNNKKENNFLDNP--ISESDILNAAKKLKNRKSAYSDKIKNEMIKSSVEILLHGYYKLFNLILEFGSFPDQWCEGLITPIFKSGDKNDTNNYRGICVTSCLSKFFCIILNERLNGYAQENDLVHPSQIGFQSGHRTADHIFTL-KTLFDKHMSTNRNDKVYACFVDFKKAFDSVWHEGLFFKLLENKIDGSFFRLIKSLYANSKCAVKLSKSRTEFFSYSRGVRQGCVLSPILFNLYINELATI 439          
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: A0A6S7K4N3_PARCT (Reverse transcriptase domain-containing protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K4N3_PARCT)

HSP 1 Score: 196 bits (498), Expect = 4.270e-52
Identity = 131/372 (35.22%), Postives = 195/372 (52.42%), Query Frame = 1
Query:    1 RWFDSECYTQKKIVRNMLN---KFGVSSE---EYRNEFKKFRALCKKKKRNFNARIGSTLNNLSNDNPKEFWRVLRSGRVQ----SQPTVEIPMENWVRHFAELSGFKP--DHKESIMSDDDLGGPGQCGSVPEGVKIELPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRRGCHEQSFLLLSSLYSA--KRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNLFIDELVKI 1074
            +WFD EC  ++  VR + N   +  +++E   EY N  + ++   K KK  F+    + L   S  +   FW  L++        S  + +I  +NWV HF +L         +E+I+   D+       +  E   ++ P  IS   I+   K LK+RK++  D IKNE+I  S   +L   + LFN +L    FP+QW   +I P+FKSGD+NDTNNYRGI + SCL K F  ILN+ L+       L+   Q GF       +  F L  +L+       R  +V+  FVDF+KA+D+V H  L+ +LL   +      L+KS+Y   KC+V+   + + FF Y  GVRQGCVLSP++FNL+I+EL  I
Sbjct:  288 KWFDKECRLKRHSVRKLANQKHRDPLNNEIRNEYHNALRIYKDTLKHKKELFHENKLNELERASETDSSLFWNTLKNMSDSYDDFSSSSPDITTQNWVSHFKQLHAKHNLGTEQENILQQLDM----LKNNKKENNFLDNP--ISESDILNAAKKLKNRKSAYSDKIKNEMIKSSVEILLHGYYKLFNLILEFGSFPDQWCEGLITPIFKSGDKNDTNNYRGICVTSCLSKFFCIILNERLNGYAQENDLVHPSQIGFQSGHRTADHIFTL-KTLFDKHMSTNRNDKVYACFVDFKKAFDSVWHEGLFFKLLENKIDGSFFRLIKSLYANSKCAVKLSKSRTEFFSYSRGVRQGCVLSPILFNLYINELATI 652          
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Match: A0A6S7I5L0_PARCT (Reverse transcriptase domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I5L0_PARCT)

HSP 1 Score: 196 bits (497), Expect = 6.370e-52
Identity = 126/377 (33.42%), Postives = 200/377 (53.05%), Query Frame = 1
Query:    1 RWFDSECYTQKKIVRNMLN---KFGVSSE---EYRNEFKKFRALCKKKKRNFNARIGSTLNNLSNDNPKEFWRVLRSGRVQ----SQPTVEIPMENWVRHFAELSGFKPDHKESIMSDDDLGGPGQCGSVPEGVKIE-------LPTHISREMIIRGIKHLKHRKASGIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSGDQNDTNNYRGISLLSCLGKLFSTILNQYLSS-RIDRARLLSDLQGGFCRRRGCHEQSFLLLSSLYSAKRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYTKVKCSVRHGT-NLSSFFGYLVGVRQGCVLSPLVFNLFIDELVKI 1074
            +WFD EC  Q+  VR + N   +  V++E   +Y    K ++   K+KK  F+ +    L  +S ++P  FW+ L++        S    ++   +W+ HF  L      H +  +  +      Q   + +  K+E       L   IS   ++   K LK+ K++  D IKNE++  S   +L + H LFN +L + +FP+QW   +I P+FKSGD+ D NNYRGI + SCL K   TILNQ LS   IDR  ++   Q GF       +  F+L + +     ++  +++  FVDF+KA+D+V H  L+ +LL   +      L+KS+Y+  KC+V+    N + FF Y  GVRQGC+LSPL+FN++I+EL  +
Sbjct:  373 KWFDKECRLQRHSVRRLANQKHRDPVNTEIRDKYHATLKIYKNTLKRKKELFHEKKLEELERVSENDPNSFWKFLKNMSDDFGDPSMSKPDVSANSWLTHFQSL------HAKHTLETE------QNNILQKLTKLEEKTPNNFLDEPISEAEVLSAAKTLKNNKSAYSDKIKNEMLKHSVKILLKLYHKLFNLVLKTGHFPDQWCEGLITPIFKSGDKADPNNYRGICVTSCLSKFLCTILNQRLSKFSIDR-NIIHPSQIGFQSGHRTADHIFVLKTIIDKHINQKNEKIYACFVDFKKAFDSVWHEGLFLKLLENKIDGHFYNLIKSLYSSSKCAVKESKINRTEFFSYSKGVRQGCILSPLLFNIYINELATL 736          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1048.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P5X7_HETAK4.340e-10358.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001E1E06902.480e-5435.14uncharacterized protein LOC123560678 n=1 Tax=Merce... [more]
A0A3C1S4H7_9FLAO4.480e-5433.33Reverse transcriptase domain-containing protein (F... [more]
A0A6S7HH85_PARCT1.560e-5334.41Reverse transcriptase domain-containing protein (F... [more]
A0A6S7JHZ6_PARCT5.480e-5333.16Reverse transcriptase domain-containing protein n=... [more]
UPI001E1E1F322.230e-5232.71uncharacterized protein LOC123553993 isoform X1 n=... [more]
A0A4W5Q2H4_9TELE2.370e-5232.16Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 Rep... [more]
A0A6S7IA75_PARCT3.380e-5234.95Reverse transcriptase domain-containing protein n=... [more]
A0A6S7K4N3_PARCT4.270e-5235.22Reverse transcriptase domain-containing protein n=... [more]
A0A6S7I5L0_PARCT6.370e-5233.42Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1048contigH-akashiwo_Contig1048:242316..243413 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog10224.XP_006813392.1
PFAMsRVT_1
Model size1098
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.31e-47
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota,39TZY@33154|Opisthokonta,3BI15@33208|Metazoa,3CYKV@33213|Bilateria
Descriptionprotein phosphatase regulator activity
Cds size1098
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387062.0295787-CDS-H-akashiwo_Contig1048:242315..2434131681387062.0295787-CDS-H-akashiwo_Contig1048:242315..243413Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1048 242316..243413 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1048.5.1prot_H-akashiwo_Contig1048.5.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1048 242316..243413 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1048.5.1

>prot_H-akashiwo_Contig1048.5.1 ID=prot_H-akashiwo_Contig1048.5.1|Name=mRNA_H-akashiwo_Contig1048.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=366bp
RWFDSECYTQKKIVRNMLNKFGVSSEEYRNEFKKFRALCKKKKRNFNARI
GSTLNNLSNDNPKEFWRVLRSGRVQSQPTVEIPMENWVRHFAELSGFKPD
HKESIMSDDDLGGPGQCGSVPEGVKIELPTHISREMIIRGIKHLKHRKAS
GIDGIKNEIIIFSAPYILDMLHLLFNKMLHSRYFPEQWNLVMIAPLFKSG
DQNDTNNYRGISLLSCLGKLFSTILNQYLSSRIDRARLLSDLQGGFCRRR
GCHEQSFLLLSSLYSAKRRRPGRVFCAFVDFRKAYDTVRHSILWNRLLSL
GMGPKLVELLKSIYTKVKCSVRHGTNLSSFFGYLVGVRQGCVLSPLVFNL
FIDELVKILAEMMCR*
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mRNA from alignment at H-akashiwo_Contig1048:242316..243413-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1048.5.1 ID=mRNA_H-akashiwo_Contig1048.5.1|Name=mRNA_H-akashiwo_Contig1048.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1098bp|location=Sequence derived from alignment at H-akashiwo_Contig1048:242316..243413- (Heterosigma akashiwo CCMP452)
AGATGGTTCGATTCGGAGTGTTATACTCAGAAAAAGATTGTTCGGAATAT GTTGAATAAATTCGGTGTTTCTTCTGAAGAATATCGTAATGAGTTTAAAA AGTTTAGAGCCCTTTGCAAAAAAAAAAAACGTAATTTCAATGCTAGGATT GGCAGCACCCTCAACAATTTGAGCAACGATAATCCGAAAGAGTTCTGGAG GGTGCTGAGGTCAGGGCGGGTTCAGTCCCAACCGACGGTCGAAATTCCGA TGGAAAACTGGGTCCGTCATTTTGCAGAATTGTCAGGTTTCAAACCTGAC CACAAAGAATCCATCATGTCTGATGACGATCTTGGTGGGCCTGGCCAATG TGGCTCTGTCCCTGAGGGAGTCAAAATTGAACTACCAACCCACATCTCTA GAGAAATGATTATCAGAGGAATTAAACATCTCAAGCATCGGAAAGCTTCG GGTATAGACGGTATAAAGAATGAAATTATTATTTTCTCGGCTCCGTATAT TTTAGATATGTTGCATCTTTTGTTCAACAAAATGCTCCATTCGCGTTATT TTCCTGAGCAATGGAATCTCGTCATGATTGCACCGTTGTTCAAGAGTGGT GATCAAAACGATACCAATAATTATCGGGGTATATCTTTGTTGTCCTGCCT TGGGAAGCTGTTCAGTACAATCCTCAATCAATATTTGTCGTCTAGAATTG ATAGGGCACGCCTTTTGTCCGACCTTCAGGGCGGTTTTTGTAGACGTAGA GGATGCCACGAGCAGAGTTTTTTGCTTTTATCTTCTCTGTATTCTGCAAA GAGGCGTCGTCCGGGCCGTGTGTTTTGTGCCTTTGTCGACTTTAGGAAAG CATACGACACAGTTCGCCATTCCATTCTGTGGAACCGTTTGTTATCTTTG GGTATGGGCCCTAAATTGGTAGAATTACTAAAAAGCATCTATACCAAGGT CAAGTGCTCAGTCCGGCATGGTACCAACCTCTCTTCGTTCTTTGGCTATC TAGTTGGAGTTCGGCAAGGCTGTGTCCTTTCCCCTCTTGTATTTAATTTA TTCATTGACGAGTTGGTTAAAATTCTCGCGGAGATGATGTGCAGGTAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1048:242316..243413-

>mRNA_H-akashiwo_Contig1048.5.1 ID=mRNA_H-akashiwo_Contig1048.5.1|Name=mRNA_H-akashiwo_Contig1048.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1098bp|location=Sequence derived from alignment at H-akashiwo_Contig1048:242316..243413- (Heterosigma akashiwo CCMP452)
AGATGGTTCGATTCGGAGTGTTATACTCAGAAAAAGATTGTTCGGAATAT
GTTGAATAAATTCGGTGTTTCTTCTGAAGAATATCGTAATGAGTTTAAAA
AGTTTAGAGCCCTTTGCAAAAAAAAAAAACGTAATTTCAATGCTAGGATT
GGCAGCACCCTCAACAATTTGAGCAACGATAATCCGAAAGAGTTCTGGAG
GGTGCTGAGGTCAGGGCGGGTTCAGTCCCAACCGACGGTCGAAATTCCGA
TGGAAAACTGGGTCCGTCATTTTGCAGAATTGTCAGGTTTCAAACCTGAC
CACAAAGAATCCATCATGTCTGATGACGATCTTGGTGGGCCTGGCCAATG
TGGCTCTGTCCCTGAGGGAGTCAAAATTGAACTACCAACCCACATCTCTA
GAGAAATGATTATCAGAGGAATTAAACATCTCAAGCATCGGAAAGCTTCG
GGTATAGACGGTATAAAGAATGAAATTATTATTTTCTCGGCTCCGTATAT
TTTAGATATGTTGCATCTTTTGTTCAACAAAATGCTCCATTCGCGTTATT
TTCCTGAGCAATGGAATCTCGTCATGATTGCACCGTTGTTCAAGAGTGGT
GATCAAAACGATACCAATAATTATCGGGGTATATCTTTGTTGTCCTGCCT
TGGGAAGCTGTTCAGTACAATCCTCAATCAATATTTGTCGTCTAGAATTG
ATAGGGCACGCCTTTTGTCCGACCTTCAGGGCGGTTTTTGTAGACGTAGA
GGATGCCACGAGCAGAGTTTTTTGCTTTTATCTTCTCTGTATTCTGCAAA
GAGGCGTCGTCCGGGCCGTGTGTTTTGTGCCTTTGTCGACTTTAGGAAAG
CATACGACACAGTTCGCCATTCCATTCTGTGGAACCGTTTGTTATCTTTG
GGTATGGGCCCTAAATTGGTAGAATTACTAAAAAGCATCTATACCAAGGT
CAAGTGCTCAGTCCGGCATGGTACCAACCTCTCTTCGTTCTTTGGCTATC
TAGTTGGAGTTCGGCAAGGCTGTGTCCTTTCCCCTCTTGTATTTAATTTA
TTCATTGACGAGTTGGTTAAAATTCTCGCGGAGATGATGTGCAGGTAG
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