mRNA_H-akashiwo_Contig1048.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: A0A7S3LC45_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LC45_9STRA) HSP 1 Score: 200 bits (508), Expect = 9.110e-58 Identity = 111/258 (43.02%), Postives = 157/258 (60.85%), Query Frame = 2 Query: 77 LNEEVERKTCKAVQESKASGKPLGVAYEAVLKPMSVDGIWAGSPVYVRRSLMPTILVGSLGAIMMALSAPQCGLFPSMVCALVMFLWFDLYSGMLHVVLDEPLNISSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIHCFYSTALLSEPIPMLLASLKLFWAWYGQASHRFAHNPKISQIPIAK------FLVAVKHHKAHHQPPHEEDYCLIGIMNPMIDAMRTVSTNRFVWLGVFLSASIFDVV 832 LNE V + T K VQ++K +G+ L A E V + + AGSPVY RS + A+++ A + +C L MFL +D YSG+LHVVLD P NI+ PI+GQP LEFQWHH IP D+VRKDF DV GDLNV V+ + I+ + L+ + M++ LKL+ A++GQ SH+ AH ++ A F+++ K H +HH+PP++ D+CLIG NP IDA+R+++TN WL +F SI D+V Sbjct: 72 LNERVVKITAKEVQKAKQAGRKL--APEFVYAQQKMTTLTAGSPVYQLRSSVLVYAYAIGTALLILKGATMLHPLTTALCVLTMFLGYDFYSGVLHVVLDHPDNIALPILGQPCLEFQWHHAIPDDLVRKDFVDVCGDLNVVVMILAAINLYLLD--LNSGVAMVIGGLKLWMAYFGQFSHKSAHAFGPARGGFATWLQKYGFMISCKDHMSHHKPPYDVDFCLIGFCNPAIDALRSLTTNNAAWLSLFFVWSILDLV 325
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: A0A6U5EGY9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EGY9_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.780e-48 Identity = 103/274 (37.59%), Postives = 151/274 (55.11%), Query Frame = 2 Query: 68 IHKLNEEVERKTCKAVQE-------SKASGK-----PLGVAYEAVLKPMSVDGIWAGSPVYVRRSLMPTILVGSLGAIMMALSAPQCGLFPSMVCALVMFLWFDLYSGMLHVVLDEPLNISSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIHCFYSTALLSEPIP---MLLASLKLFWAWYGQASHRFAHN-----PKISQ-IPIAKFLVAVKHHKAHHQPPHEEDYCLIGIMNPMIDAMRTVSTNRFVWLGVFLSASIFD 826 I LN++VE+ T A+ E S+ G E V + + AG+PVY RS + M+ Q LF + + L +FL +DLYSG+LHVV D P NI P++GQP LEFQWHH IP D+VRKDF DV GDLN + + ++ + E + ++LA KL+ ++GQ SHR AH+ P+++ + +++ + H +HH+PPH+ D+CLIG+ NP++ AMR V+ NR WL VFL+ S+ D Sbjct: 49 IDALNDKVEKLTAAALAEHASALRRSRLPGPHDXXXXXXXXLEYVYAQRKMTTMVAGTPVYQLRSAYAVFSYLLITLAMIVYGMSQISLFATSLSLLTIFLGYDLYSGVLHVVFDHPDNIRLPVLGQPCLEFQWHHKIPDDLVRKDFVDVCGDLNTVALILFFVYGYLLFGPHREGVSGAALVLAGSKLWMGYFGQFSHRSAHSYGKHCPRLAAWLQKRGLMISPRAHLSHHKPPHDTDFCLIGVCNPIVAAMRRVTLNRHAWLAVFLTWSVLD 322
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: A0A7S3PX68_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX68_9STRA) HSP 1 Score: 158 bits (399), Expect = 3.460e-42 Identity = 95/298 (31.88%), Postives = 160/298 (53.69%), Query Frame = 2 Query: 8 MCQTDKMNEDVRTVASGRILIHKLNEEVERKTCKAVQESKASGKPLGVAYEAVLKPMSVDGIW-----AGSPVYVRRSLMPTILVGSLGAIMMALSAPQCGLFPSMVCALVMFLWFDLYSGMLHVVLDEPLNISSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIHC--FYSTALLSEPIPMLLASLKLFWAWYGQASHRFAHNPK------ISQIPIAKFLVAVKHHKAHHQPPHEEDYCLIGIMNPMIDAM-RTVSTNRFVWLGVFLSASIFDVVLLTAVVRKV 859 MC+ D N+D + L E+V++ K +++K K + + VLK S +W AG+P+YV R+ I+ A+++A + L ++C + + +D+ SG LH+V D+ N+ P++GQP LEFQ HH P D+V++D DV+GDLN + V++ ++ + + +KLF A+YGQ SHR AH P I + F++ + H++HH+PPH++D+CL+GI NP+I+ M V+ NR+ W+ F ++F + L V+ +V Sbjct: 1 MCRAD-FNKDPNAI---------LEEQVQKLILK--EQAKEQTKDV----DPVLKIASQPQLWGSLKRAGTPIYVPRTHSLVIVYSIFSALILAWAIHDTSLLHFILCIIGSLVGYDILSGFLHIVFDDTRNLCLPVLGQPCLEFQMHHHFPYDLVKRDLLDVLGDLNTVTGILAVLNICPYFFCDPWNNTTHRFMLGMKLFMAYYGQFSHRSAHTPSSVHNKYIEALRKIGFMIPLDVHRSHHRPPHDKDFCLVGICNPLINFMYHHVTRNRWFWMCGFFGVALFGIPLEAYVMDRV 282
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: A0A8J2S8L3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8L3_9STRA) HSP 1 Score: 134 bits (338), Expect = 3.850e-33 Identity = 85/224 (37.95%), Postives = 124/224 (55.36%), Query Frame = 2 Query: 200 GSPVYVRRSLMPTILVGSLGAIMMALSAPQCGLFPSMVCALVMFLWFDLYSGMLHVVLDEPLN---ISSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIHCFYSTALL--SEPIPMLLASLKLFWAWYGQASHRFAHNPKISQIPIAKFLVAV------KHHKAHHQPPHEEDYCLIGIMNPMIDAM-RTVSTNRFVWLGVFLSASIFDVVL 835 G+ VY R + ++G++ + +AP F M+ A M+L +D YSG+LHV LD+P N + S I+ Q LEFQWHH IP D K F DLN+ V+ + V++C LL + L LKLF+A++GQ HR AH PK + +FL + H HH+PPH+E++CLIG M+P ++ + + TN +VW G++L S DV L Sbjct: 76 GALVYPNRIVWLPWVMGAVAGYLCT-TAPSLRAFLWMLPA--MYLGYDFYSGVLHVALDDPKNMQGVKSYILFQGCLEFQWHHAIPYDGASKPFIACCADLNIIVLILMVLNC----GLLGYTSGTRAALTGLKLFFAYFGQYCHRAAHTPKSKRPQWVQFLQSTGFMTPQAKHNGHHRPPHDENFCLIGKMDPAVNGLIKLCGTNDWVWFGLWLGLSCCDVAL 292
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: A0A7S1VG18_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VG18_9EUKA) HSP 1 Score: 129 bits (323), Expect = 2.430e-31 Identity = 93/275 (33.82%), Postives = 125/275 (45.45%), Query Frame = 2 Query: 68 IHKLNEEVERKTCKAVQESKASGKPLGVAYEAVLKPMSVDGIWAGSPVYVRRSLMPTILVGSLGAIMMALSAPQCGLFPSMVCALVMFLWFDLYSGMLHVVLDEPLNISSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIHCFYSTALL-----SEPIPMLLASLKLFWAWYGQASHRFAHNPK------ISQIPIAKFLVAVKHHKAHHQPPHEEDYCLIGIMNPMIDAMRTVSTNRFVWLGVFLSASIFDVVLLTAVVRKV 859 I KLN V KT K GV +E V G+ VY R + + + + AP S+ L+M+ W DLY +LHVVLD P I+ P I LEFQWHH IP+DI RK+F +V GDLN V A V+ F L + M L K A++GQ SHR AH P+ + Q+ A ++ HK HH L G N +I A+ N + WLG F+ ++FDVVL T ++ + Sbjct: 11 IDKLNARVAEKTANV-----NGAKAKGVEFEQVR---------LGAQVYHHRFRSIVYGLALISTYFVTVGAPSVA--ASVASLLLMYFWVDLYGAVLHVVLDNPKFITLPGIDAGCLEFQWHHHIPSDITRKEFVEVCGDLN-GVAAFHVVFIFGVLKYLLRWDFDTNLAMTLMGAKALLAYFGQYSHRMAHTPESLRPSIVRQLQAAHIMLPATIHKKHHDTYDGSFPILSGHTNGLISALLDKVPNDYAWLGTFVVMTLFDVVLFTKLLAPI 268
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: A0A0V0QU69_PSEPJ (Lipid_desat domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QU69_PSEPJ) HSP 1 Score: 129 bits (324), Expect = 5.940e-31 Identity = 69/187 (36.90%), Postives = 109/187 (58.29%), Query Frame = 2 Query: 329 FLWFDLYSGMLHVVLDEPLNI---SSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIHCFYST-ALLSEPIPMLLASLKLFWAWYGQASHRFAHNPK------ISQIPIAKFLVAVKHHKAHHQPPHEEDYCL-IGIMNPMIDAMRTVSTNRFVWLGVFLSASIFDVVLLTAVVRK 856 F W+DL+SG+LHV LD+P N+ S I+ +P LEFQWHH IP DI K + +GDLN +G+I F +LS P M+L+ K F+A+YGQ SH+ +H + ++ + + L++ K HK HH H++++C+ G N +I ++ ++TN VW +F + FD L+ ++ K Sbjct: 138 FFWYDLFSGILHVCLDDPRNLIGWRSAILYKPCLEFQWHHVIPADIASKPYYQSIGDLN---FVVGLIFAFQCCMGILSNPTAMVLSGFKFFFAYYGQFSHKMSHTFEGDRSIFVNLLQKSHILLSEKDHKVHHTN-HDDNFCIGSGTFNGVIRSLLKITTNPNVWFCIFGYSLFFDAFTLSFIIDK 320
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: D7FL42_ECTSI (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL42_ECTSI) HSP 1 Score: 114 bits (285), Expect = 7.810e-26 Identity = 65/193 (33.68%), Postives = 105/193 (54.40%), Query Frame = 2 Query: 287 QCGLFPSMVCALVMFLWFDLYSGMLHVVLDEPLNISSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIHCFYSTALL----SEPIPMLLAS-LKLFWAWYGQASHRFAHNPKISQIPIAKFL------VAVKHHKAHHQPPHEEDYCLIGIMNPMIDAMRTVSTNRFVWLGVFLSASIFDVV 832 +CG+ P++ VM+ D YSG+LHVVLD+ N++ P++ QPA+EFQ+HH IP D + F + +GDLN +G +H TAL S+ +L A K+ A++G +HR AH K + +L ++ HK HH PPH+++YCL+G+ + + + W+ +FL + D + Sbjct: 73 ECGVAPTVGAFAVMYFVLDFYSGVLHVVLDDDWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLN---FIVG-LHLALFTALFVRGGSQDFMLLTAGGWKMVLAYWGIWNHRQAHQLKSKRPRWCTYLQNNGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTWLGRRNLGSIFWIALFLGLTALDTI 261
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: A0A6H5L5I7_9PHAE (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I7_9PHAE) HSP 1 Score: 114 bits (285), Expect = 5.170e-25 Identity = 66/193 (34.20%), Postives = 104/193 (53.89%), Query Frame = 2 Query: 287 QCGLFPSMVCALVMFLWFDLYSGMLHVVLDEPLNISSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIHCFYSTALL----SEPIPMLLAS-LKLFWAWYGQASHRFAHNPKISQIPIAKFL------VAVKHHKAHHQPPHEEDYCLIGIMNPMIDAMRTVSTNRFVWLGVFLSASIFDVV 832 +CG+ P++ VM+ D YSG+LHVVLD+ N+ P++ QPA+EFQ+HH IP D + F + +GDLN +G +H TAL S+ +L A K+ A++G +HR AH K + +L ++ HK HH PPH+++YCL+G+ + + + W+ +FL + D V Sbjct: 178 ECGVAPTVGAFAVMYFVLDFYSGVLHVVLDDDWNMKVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLN---FIVG-LHLALFTALFVRGGSQDFMLLTAGGWKMVLAYWGIWNHRQAHQLKSKRPRWCTYLQNNGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTWLGRRNLGSIFWIALFLGLTALDTV 366
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: A0A7Y2FPK9_9DELT (Lipid_desat domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y2FPK9_9DELT) HSP 1 Score: 99.8 bits (247), Expect = 1.880e-20 Identity = 60/188 (31.91%), Postives = 90/188 (47.87%), Query Frame = 2 Query: 323 VMFLWFDLYSGMLHVVLDEPLNISSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIH---CFYSTALLSEPIPMLLASLKLFWAWYGQASHRFAHNPKISQIPIA------KFLVAVKHHKAHHQPPHEEDYCLIGIMNPMIDAMRTVSTNRFVWLGVFLSASIFDVVLLTAVVRKV 859 V + + D YSG+LHVVLD P + P+IG P +EFQWHH P DI + DV GDLNV ++ C +ST ++A + W + Q SHR AH ++ +A + L+ H HH + L G +I M V N + WL +F+ + D+V + +V ++ Sbjct: 91 VFYFYIDFYSGVLHVVLDNPRFVRLPLIGVPCVEFQWHHTFPYDISTRRLFDVWGDLNVLLLVKSAFLFGICGFSTT------TFMVAGVGYAWGYANQFSHRLAHTAPRNRPKLAVWMQEHRLLMPPAVHHVHHNDHTQAFPVLSGHSRGLIQGMLRVIPNGYFWLVLFVVLTALDLVAICWLVDRI 272
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Match: A0A4D9D5K9_9STRA (Lipid_desat domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5K9_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.720e-15 Identity = 53/172 (30.81%), Postives = 87/172 (50.58%), Query Frame = 2 Query: 329 FLWFDLYSGMLHVVLDEPLNISSPIIGQPALEFQWHHFIPTDIVRKDFSDVVGDLNVPVIAMGVIHCFYSTALLSEPIPMLLASLKLFWAWYGQASHRFAHNPKISQIPIAK------FLVAVKHHKAHHQPPHEEDYCLIGIMNPMIDAM-RTVSTNRFVWLGVFLSASIF 823 +++ +LYS +LH+VLD P I P + QP EF HH +P +I ++ + D+ GDLNV V + I+ + + ++A+ A+ GQ +HR AH P P A+ LV+ H+AHH+ L G +I + V +++VWL +F ++F Sbjct: 113 YVYMELYSAVLHIVLDNPAFIKVPGLDQPVFEFLAHHILPVEIAQRRYRDICGDLNVIVGLIFAINLLLFDWMKDGRVMCVVAAGGAM-AYLGQFAHRQAHMPPSKVSPFARALQDAGLLVSPHLHRAHHRTYDRGFAILGGWSEGLITTLYHHVVPSQYVWLALFAVMTVF 283 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1048.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1048.4.1 >prot_H-akashiwo_Contig1048.4.1 ID=prot_H-akashiwo_Contig1048.4.1|Name=mRNA_H-akashiwo_Contig1048.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=294bp MCQTDKMNEDVRTVASGRILIHKLNEEVERKTCKAVQESKASGKPLGVAYback to top mRNA from alignment at H-akashiwo_Contig1048:173165..174254+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1048.4.1 ID=mRNA_H-akashiwo_Contig1048.4.1|Name=mRNA_H-akashiwo_Contig1048.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1090bp|location=Sequence derived from alignment at H-akashiwo_Contig1048:173165..174254+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1048:173165..174254+ >mRNA_H-akashiwo_Contig1048.4.1 ID=mRNA_H-akashiwo_Contig1048.4.1|Name=mRNA_H-akashiwo_Contig1048.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=882bp|location=Sequence derived from alignment at H-akashiwo_Contig1048:173165..174254+ (Heterosigma akashiwo CCMP452)back to top |