mRNA_H-akashiwo_Contig1046.6.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1046.6.1
Unique NamemRNA_H-akashiwo_Contig1046.6.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: A0A7S3UUX5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUX5_HETAK)

HSP 1 Score: 542 bits (1396), Expect = 2.130e-191
Identity = 254/311 (81.67%), Postives = 277/311 (89.07%), Query Frame = 1
Query:    1 RVATKYSNGQAFDCRGLYATELIPEGEVIDEGLDENTVIMTRDEIINFDGPEQHKRNLINFSYMLDDDVYASILEPGDDATLYYNHSCDPNSWYAKDSHGKEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLYYRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLRKSGTGGHSDDAKGIFTCAPIPQGTAVLSWAGKVVHADRLAKCTEEEQHFSLQVAEDLFQIPDARNLRELPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTLGHACDNFKCGAGA 933
            R+ T+YS+GQAF+CRGL+A E IPEGEVID GLDENTVIMTRDEI+NF+GPEQHK+NLINFSYMLDDD YASILEPGDDATLYYNHSCDPNSWYAKDS+GKEIMVARR+I PGEEIVCHYGTFE+ELSFHAGMKCFCGA+NCEGVFTGL YRDP F+  YEGRLSPYLTRLS+GLSWYRPHLYLRKSGTGG   +AKG+FT   IPQG AVLSWAGKVVH DRL KCTEEEQHFSLQ+AEDL+QIPD    RELPDFVNHGC PTCGLLDATTLVALRDL+   +   DYAMSTAN++ + CDNFKC  GA
Sbjct:   26 RITTRYSDGQAFECRGLFAKETIPEGEVIDVGLDENTVIMTRDEILNFNGPEQHKKNLINFSYMLDDDCYASILEPGDDATLYYNHSCDPNSWYAKDSNGKEIMVARRNIHPGEEIVCHYGTFESELSFHAGMKCFCGASNCEGVFTGLSYRDPEFLTQYEGRLSPYLTRLSEGLSWYRPHLYLRKSGTGGDPMEAKGVFTSKAIPQGAAVLSWAGKVVHVDRLVKCTEEEQHFSLQIAEDLYQIPDGSKRRELPDFVNHGCAPTCGLLDATTLVALRDLQPGDEITYDYAMSTANSMANTCDNFKCECGA 336          
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: A0A0G4IQX1_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IQX1_PLABS)

HSP 1 Score: 211 bits (536), Expect = 3.570e-62
Identity = 125/312 (40.06%), Postives = 175/312 (56.09%), Query Frame = 1
Query:   34 FDCRGLYATELIPEGEVI---DEGLDENTVIMTRDEIINFDGPEQH--KRNLINFSYMLDDDVYASILEPGDDATLYYNHSCDPNSWYAKDSHGKEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLYYRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLRKSGTGGHSDDAKGIFTCAPIP-----QGTAVLSWAGKVVHADRLAK---CTEEEQHFSLQVAEDLFQIP---DARNLRELPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTLGHACDNFKC 921
            F CRGL+A   +P G +I   D+G  E   + TR +I      E H  +  L+ FSYML DD ++S  +P  D + ++NHSC PN+WY  D    E +VA RDI+ GE++V  Y   ETE S H+GMKC CG+  C GV T   +R  AFV+ Y G L+ Y+ R     SWY P   LR        D A G+F C   P      G  +L ++GKVVH D+L +    +  +   SLQV +DL+QIP   ++ +  E  D+VNH C+P+CG+LD+ T+VA+RD+++  +   DYAM     +    DNF C
Sbjct:   16 FACRGLFAKVDMPAGALIWWHDKGT-EPVDVYTRTQI------EAHPQREKLVMFSYMLGDDQFSSTADPESDPSFFFNHSCSPNTWYDTD----ERIVAMRDIKAGEQLVYDYSFTETEASLHSGMKCQCGSGQCRGVLTFSEWRSRAFVKRYHGHLTEYIWRKHSENSWYDPRAELRH-----RPDGALGMF-CRTTPGMAFRAGEKILVFSGKVVHRDQLLEPGALSARDWEMSLQVHQDLWQIPAWKESGDKCETTDYVNHSCDPSCGMLDSVTVVAIRDIQEGEEITIDYAMVNDGLITEPSDNFVC 310          
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: A0A485KN49_9STRA (Aste57867_9537 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN49_9STRA)

HSP 1 Score: 194 bits (494), Expect = 3.630e-56
Identity = 120/309 (38.83%), Postives = 167/309 (54.05%), Query Frame = 1
Query:   34 FDCRGLYATELIPEGEVID--EGLDENTVIMTRDEIINFDGPEQHKRNLINFSYMLDDDVYASILEPGDDATLYYNHSCDPNSWYAKDSHGKEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLYYRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLRKSGTGGHSDDAKGIFTCAPIPQGTAVLSWAGKVVHADRLAK---CTEEEQHFSLQVAEDLFQIP---DARNLRELPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTLGHACDNFKCGAGAA 936
            FDCRGL+A E +  G  +   +   E  V  TR EI+    PE+ K  LINFSYM++DD +AS LEP  DA  Y+NHSCDPN W+  D  GK  +V  R ++ GE++   Y   ETE S H GM+C CGA  C G+     +R   F++   G ++ Y+ R      WY   + LR          A+    C  I +G  VL ++GKV+H D+L +    T  +   SLQV  DL+QIP   +  +  E  D++NH C+P+CG+LD+ T+VA+RDL    +   DY M    +     DNF C  G+A
Sbjct:   16 FDCRGLFAQEDLAAGTTVWLWDTATEPLVTFTRKEILAH--PEREK--LINFSYMVNDDCFASTLEPEADACWYFNHSCDPNCWFEGD--GK--IVTLRPVKKGEQLCYDYACTETESSLHYGMQCRCGAAACRGLLKFSDWRSRGFLKKNLGHVTDYIMRKHAENGWYDTRMELRYKSKTSMGLFARETSDCK-ILKGDIVLMFSGKVIHKDQLLERGAMTSRDFEMSLQVQRDLWQIPAWKETGDKCETSDYINHSCDPSCGMLDSVTVVAIRDLYPGEEITIDYCMVNDGSNDQPSDNFTCMCGSA 315          
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: A0A7S3XKY8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKY8_HETAK)

HSP 1 Score: 184 bits (468), Expect = 1.630e-55
Identity = 90/99 (90.91%), Postives = 91/99 (91.92%), Query Frame = 1
Query:  640 WAGKVVHADRLAKCTEEEQHFSLQVAEDLFQIPDARNLRELPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTLGHACDNFKCGAGAA 936
            WAGKVVHADRLAKCTEEEQHFSLQVAEDLFQIPDARNLRELPDFVNHGCEPTCGLLDATTLVALRDLR   +   DYAMSTANTLGHACDNFKC  GAA
Sbjct:    1 WAGKVVHADRLAKCTEEEQHFSLQVAEDLFQIPDARNLRELPDFVNHGCEPTCGLLDATTLVALRDLRPGDEITYDYAMSTANTLGHACDNFKCECGAA 99          
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: A0A0H5R216_9EUKA (Uncharacterized protein n=9 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R216_9EUKA)

HSP 1 Score: 191 bits (486), Expect = 8.110e-55
Identity = 124/318 (38.99%), Postives = 162/318 (50.94%), Query Frame = 1
Query:    4 VATKYSNGQAFDCRGLYATELIPEGEVIDEGLDENTVIMTRDEIINFDGPEQHKRNLINFSYMLDDDVYASILEPGDDATLYY-NHSCDPNSWYAKDSHGKEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLYYRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLRKSGTGGHSDDAKGIFTCAPIP-----QGTAVLSWAGKVVHADRLAK---CTEEEQHFSLQVAEDLFQIP---DARNLRELPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTLGHACDNFKC 921
            V  K  +   F+C GL+A E +P G  I           TR EI    G    K  L+ FSYM DDD Y S L+P   +  YY NHSCDPN W+  DS     +V    ++ GE +   Y   ETE S H GMKC CG +NC GV T   +R  AFV+ Y G LS ++ R     SWY P   LR    G       G+F C  +P      G  VL ++GKVVH  +L +    +  +   SLQV  DL QIP   ++ +  E  D++NH C+P+CG+LD+ T+VALRD+    +   DYAM     +    DNFKC
Sbjct:    6 VDVKRFDDYGFECVGLFAKEDLPAGTAI-WVYKWPYESFTRAEIEAHPG----KSALMKFSYMADDDRYESCLDPQKSSLSYYFNHSCDPNCWFDTDSK----IVTMIPVRKGEPLTYDYALTETESSLHYGMKCLCGKSNCRGVLTFDQWRSRAFVKKYYGHLSEFIWRKHCENSWYDPRAELRSKANG-----ELGMF-CRTLPGMEFRAGDKVLVFSGKVVHRTQLLEEGALSARDLQMSLQVDSDLVQIPAWKESGDFSETTDYINHSCDPSCGMLDSVTVVALRDIELGEEITIDYAMVNDGLIQGPSDNFKC 308          
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: A0A6G0X2H4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2H4_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.620e-54
Identity = 113/310 (36.45%), Postives = 167/310 (53.87%), Query Frame = 1
Query:    4 VATKYSNGQAFDCRGLYATELIPEGEVI--DEGLDENTVIMTRDEIINFDGPEQHKRNLINFSYMLDDDVYASILEPGDDATLYYNHSCDPNSWYAKDSHGKEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLYYRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLR-KSGTGGHSDDAKGIFTC----APIPQGTAVLSWAGKVVHADRLAKC---TEEEQHFSLQVAEDLFQIPDARNLRE---LPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTL 894
            V  K  N   F+C GL+A E IPEG ++   EG D      T+ EI+        K  LI +SYM  DD + S L P  D + Y+NHSCDP  WY     G E ++ RR ++ GE++   Y   ETE S H G++C CG+ NC G  T   +R  A+V+  +G L+ Y+ +     SWY P   +R K+G+      ++G+F      A I     V+ ++GKV+H D+LA+    ++ +   SLQVA  L+QIP  +   E     DF+NH C+P+CG+ D+ T++A+RD+    +   DYAM    T+
Sbjct:    6 VDVKKFNDYGFECMGLFAKEDIPEGTLVWYAEGHD-ILDCYTKAEIL----AHPQKDMLITYSYMRGDDRFCSTLNPSSDPSWYFNHSCDPTCWYE----GDERIITRRAVKKGEQLTYDYSCTETESSMHYGLRCLCGSANCRGTLTFSEWRSRAYVRANKGHLNDYIWQKHSEHSWYDPRTEVRSKAGS------SRGLFARIQKDAVIKANEIVVVFSGKVIHRDQLAEAGAFSKRDFEMSLQVAPHLWQIPSWKESGEQYDTSDFINHSCDPSCGMRDSVTVIAIRDIHPGDEITIDYAMVNDGTI 300          
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: A0A6G0XAD9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAD9_9STRA)

HSP 1 Score: 189 bits (479), Expect = 6.370e-54
Identity = 114/308 (37.01%), Postives = 162/308 (52.60%), Query Frame = 1
Query:   34 FDCRGLYATELIPEGEV--IDEGLDENTVIMTRDEIINFDGPEQHKRNLINFSYMLDDDVYASILEPGDDATLYYNHSCDPNSWYAKDSHGKEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLYYRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLRKSGTGGHSDDAKGIF----TCAPIPQGTAVLSWAGKVVHADRLAK---CTEEEQHFSLQVAEDLFQIP---DARNLRELPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTLGHACDNFKC 921
            F C GL+A E +    V  I +   E  V  TR EI+  D PE+ K  L+NFSYM++DD +AS  EP  D   Y+NHSCDPN W+     G + +V RR +  GE++   Y   ETE S H GM+C CGA+ C G      +R   F++   G ++ Y+ R      WY   + LR       S  + G+F    +   I +G  VL ++GK++H D L +    T  +   SLQV  DL+QIP   +  +  E  D++NH C+P+CG+LD+ T+VA+RDL    +   DY M    +     DNF C
Sbjct:   16 FKCHGLFAQEDLDANTVVWIWDRATEPLVTFTRKEIM--DHPEREK--LVNFSYMVNDDCFASTTEPEADPCWYFNHSCDPNCWFE----GDDKIVTRRPVLKGEQLCYDYACTETESSLHYGMECRCGADTCRGQLKFTDWRSRGFIKKNLGHVTDYIMRKHAENGWYDTRMELRYK-----SKTSMGLFCREESDCKILKGDIVLMFSGKIIHKDHLLERNAMTPRDFEMSLQVHRDLWQIPAWKETGDKCETSDYINHSCDPSCGMLDSVTVVAIRDLYPGEEITIDYCMVNDGSNDQPSDNFTC 310          
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: A0A067BML2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BML2_SAPPC)

HSP 1 Score: 187 bits (476), Expect = 1.600e-53
Identity = 113/324 (34.88%), Postives = 169/324 (52.16%), Query Frame = 1
Query:    4 VATKYSNGQAFDCRGLYATELIPEGEVIDEGLDENTV-IMTRDEIINFDGPEQHKRNLINFSYMLDDDVYASILEPGDDATLYYNHSCDPNSWYAKDSHGKEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLYYRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLR-KSGTGGHSDDAKGIFTC----APIPQGTAVLSWAGKVVHADRLAK---CTEEEQHFSLQVAEDLFQIPDARNLRE---LPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTLGHACDNFKCGAGAAS 939
            V  K  +   F+C GL+A E +P+G +I    D + V I T+ EI+        K  LI +SYM  DD + + L P  D + Y+NHSCDP +WY     G E +   RD++ GE++   Y   ETE S H G++C CG   C GV T   +R   F++     L+ ++ +     SWY P   +R KSG      DA G+F      A I +G  +  ++GK+VH D + +    ++ +   SLQVA  L+QIP  +   E     D++NH C+P+CG+ D+ T+ A+RD+    +   DYAM    ++    DNF C  G+AS
Sbjct:    6 VDVKKFHDYGFECMGLFAKEDLPKGTLIWYSQDIDVVDIYTKAEIL----AHPQKDTLITYSYMRGDDKFGTTLNPSSDPSWYFNHSCDPTTWYE----GDERITTCRDVKKGEQLTYDYACTETESSMHYGLQCLCGTAACRGVLTFSEWRSRKFIKKNRDHLNDHVWKKHSENSWYDPRAEVRAKSG------DAMGLFARLHKDAVIKKGEIICVFSGKIVHRDHILEPGAVSKRDFEMSLQVAPTLWQIPSWKESGEKCDTSDYINHSCDPSCGMKDSVTVHAIRDIYPGDEITIDYAMVNDGSMEQESDNFDCQCGSAS 315          
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: W4FEK5_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FEK5_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.730e-53
Identity = 111/304 (36.51%), Postives = 161/304 (52.96%), Query Frame = 1
Query:   34 FDCRGLYATELIPEGEVID--EGLDENTVIMTRDEIINFDGPEQHKRNLINFSYMLDDDVYASILEPGDDATLYYNHSCDPNSWYAKDSHGKEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLYYRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLRKSGTGGHSDDAKGIFTCAPIPQGTAVLSWAGKVVHADRLAK---CTEEEQHFSLQVAEDLFQIP---DARNLRELPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTLGHACDNFKC 921
            F+C GL+A E +P    +   + + E  V  TR E+++   P++ K  LINFSYM++DD +A+   P +DA  Y+NHSCDPN W+  D  GK  +V RR ++ GE++   Y   ETE S H  M C CGA  C G      +R   F++   G ++ Y+ R      WY   + LR           + +  C  I +G  VL ++GK+VH D L +    T  +   SLQV  DL+QIP   +  +  E  D++NH C+P+CG+LD+ T+VA+RDL    +   DY M    T     DNF C
Sbjct:   16 FECHGLFAQEDLPVNTPVWVWDTVTEPLVTFTRKEVMSH--PDRQK--LINFSYMVNDDCFATTTAPEEDACWYFNHSCDPNCWFEGD--GK--IVTRRAVKKGEQLCYDYACTETESSLHVDMNCRCGAETCRGQLKFNDWRSRGFMKKNLGHVTDYIMRKHAENGWYDTRMELRYKSKSSMGLFCREVSDCK-ILKGEIVLMFSGKIVHKDTLLERGAMTPRDFEMSLQVQRDLWQIPAWKETGDKIETSDYINHSCDPSCGMLDSVTVVAIRDLHPGEEITIDYCMVNDGTNSDPSDNFTC 310          
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Match: A0A024U8P3_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024U8P3_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.420e-52
Identity = 110/304 (36.18%), Postives = 163/304 (53.62%), Query Frame = 1
Query:    4 VATKYSNGQAFDCRGLYATELIPEGEVI--DEGLDENTVIMTRDEIINFDGPEQHKRNLINFSYMLDDDVYASILEPGDDATLYYNHSCDPNSWYAKDSHGKEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLYYRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLR-KSGTGGHSDDAKGIFTC----APIPQGTAVLSWAGKVVHADRLAK---CTEEEQHFSLQVAEDLFQIPDARNLRE---LPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAM 876
            V  K  N   F+C GL+A E +P+G ++   EG D      T+ EI+        +  LI +SYM  DD + S L P  D + Y+NHSCDP  WY     G E +   RD++ GE++   Y   ETE S H G++C CG   C GV T   +R  A+ +  +G L+ Y+       SWY P   +R KSG      D++G+F      A I  G  V+ ++GK+VH +++++    ++ +   SLQVA DL+QIP  +   E     DF+NH C+P+CG+ D+ T+VA+RD+    +   DYAM
Sbjct:    6 VQVKQFNDYGFECWGLFAKEDLPKGTLVWYAEGHDVLDTY-TKAEIL----AHPQRETLITYSYMRGDDKFCSTLNPSSDPSWYFNHSCDPTCWYE----GDERITTCRDVKKGEQLAYDYSCTETESSMHYGLRCLCGTAACRGVLTFSEWRSRAYARKNKGHLNDYVWEKHTENSWYDPRAEVRTKSG------DSRGMFARIQKDALIKAGEIVVVFSGKIVHRNQVSEPGAISKRDLEMSLQVAPDLWQIPSWKESGEKYDTSDFINHSCDPSCGMWDSVTVVAIRDIHPGDEITIDYAM 294          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1046.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3UUX5_HETAK2.130e-19181.67Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A0G4IQX1_PLABS3.570e-6240.06Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A485KN49_9STRA3.630e-5638.83Aste57867_9537 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S3XKY8_HETAK1.630e-5590.91Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0H5R216_9EUKA8.110e-5538.99Uncharacterized protein n=9 Tax=Spongospora subter... [more]
A0A6G0X2H4_9STRA1.620e-5436.45Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0XAD9_9STRA6.370e-5437.01Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A067BML2_SAPPC1.600e-5334.88Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
W4FEK5_9STRA1.730e-5336.51Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A024U8P3_9STRA1.420e-5236.18Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1046contigH-akashiwo_Contig1046:243562..244500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog157072.XP_008873751.1
PFAMsBromodomain,FYRC,Jas,PHD,SET,zf-HC5HC2H
Model size939
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.39e-53
EggNOG OGsCOG2940@1|root,KOG4443@2759|Eukaryota
Descriptionhistone methyltransferase activity (H3-K4 specific)
Cds size939
COG categoryDK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387061.7321482-CDS-H-akashiwo_Contig1046:243561..2445001681387061.7321482-CDS-H-akashiwo_Contig1046:243561..244500Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1046 243562..244500 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1046.6.1prot_H-akashiwo_Contig1046.6.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1046 243562..244500 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1046.6.1

>prot_H-akashiwo_Contig1046.6.1 ID=prot_H-akashiwo_Contig1046.6.1|Name=mRNA_H-akashiwo_Contig1046.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=313bp
RVATKYSNGQAFDCRGLYATELIPEGEVIDEGLDENTVIMTRDEIINFDG
PEQHKRNLINFSYMLDDDVYASILEPGDDATLYYNHSCDPNSWYAKDSHG
KEIMVARRDIQPGEEIVCHYGTFETELSFHAGMKCFCGANNCEGVFTGLY
YRDPAFVQLYEGRLSPYLTRLSKGLSWYRPHLYLRKSGTGGHSDDAKGIF
TCAPIPQGTAVLSWAGKVVHADRLAKCTEEEQHFSLQVAEDLFQIPDARN
LRELPDFVNHGCEPTCGLLDATTLVALRDLRQAAKSRCDYAMSTANTLGH
ACDNFKCGAGAAS
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mRNA from alignment at H-akashiwo_Contig1046:243562..244500+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1046.6.1 ID=mRNA_H-akashiwo_Contig1046.6.1|Name=mRNA_H-akashiwo_Contig1046.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=939bp|location=Sequence derived from alignment at H-akashiwo_Contig1046:243562..244500+ (Heterosigma akashiwo CCMP452)
CGAGTCGCAACAAAGTACTCAAACGGCCAAGCCTTTGACTGCCGTGGCCT GTATGCGACGGAACTGATTCCCGAGGGCGAAGTGATTGACGAGGGTCTCG ATGAAAACACAGTGATCATGACCAGGGATGAGATCATCAATTTTGATGGG CCTGAGCAACACAAAAGAAATCTTATCAATTTCTCATATATGCTGGATGA TGATGTGTACGCTTCGATTTTGGAACCAGGCGACGATGCCACTCTATACT ACAACCACTCTTGCGACCCTAACTCCTGGTATGCAAAGGATTCACATGGC AAAGAGATCATGGTGGCTCGCAGAGACATACAACCTGGCGAAGAGATCGT CTGCCACTACGGCACTTTTGAAACCGAACTGAGCTTTCATGCTGGCATGA AGTGCTTCTGTGGAGCTAACAACTGCGAAGGTGTGTTCACAGGCCTATAC TACCGGGACCCAGCATTTGTGCAGCTTTATGAAGGTCGGCTGTCTCCGTA CTTGACACGTCTTTCCAAGGGCCTGTCTTGGTACCGCCCCCACCTCTACC TTCGCAAAAGTGGGACAGGTGGACACTCTGATGATGCGAAGGGAATTTTC ACCTGTGCGCCCATCCCCCAGGGTACTGCTGTCCTGTCCTGGGCTGGCAA GGTTGTACATGCTGACAGGCTGGCCAAGTGCACGGAGGAAGAGCAGCACT TCTCCCTGCAAGTTGCCGAGGATCTCTTCCAGATACCGGACGCAAGGAAC CTGCGAGAGCTCCCCGACTTTGTGAACCACGGCTGCGAACCGACCTGCGG CTTGCTCGACGCGACGACCCTGGTGGCGCTGCGGGACCTTCGCCAGGCGG CGAAATCACGATGCGACTACGCCATGTCAACCGCCAACACCCTGGGCCAC GCCTGCGACAACTTCAAGTGCGGTGCGGGGGCGGCGTCT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1046:243562..244500+

>mRNA_H-akashiwo_Contig1046.6.1 ID=mRNA_H-akashiwo_Contig1046.6.1|Name=mRNA_H-akashiwo_Contig1046.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=939bp|location=Sequence derived from alignment at H-akashiwo_Contig1046:243562..244500+ (Heterosigma akashiwo CCMP452)
CGAGTCGCAACAAAGTACTCAAACGGCCAAGCCTTTGACTGCCGTGGCCT
GTATGCGACGGAACTGATTCCCGAGGGCGAAGTGATTGACGAGGGTCTCG
ATGAAAACACAGTGATCATGACCAGGGATGAGATCATCAATTTTGATGGG
CCTGAGCAACACAAAAGAAATCTTATCAATTTCTCATATATGCTGGATGA
TGATGTGTACGCTTCGATTTTGGAACCAGGCGACGATGCCACTCTATACT
ACAACCACTCTTGCGACCCTAACTCCTGGTATGCAAAGGATTCACATGGC
AAAGAGATCATGGTGGCTCGCAGAGACATACAACCTGGCGAAGAGATCGT
CTGCCACTACGGCACTTTTGAAACCGAACTGAGCTTTCATGCTGGCATGA
AGTGCTTCTGTGGAGCTAACAACTGCGAAGGTGTGTTCACAGGCCTATAC
TACCGGGACCCAGCATTTGTGCAGCTTTATGAAGGTCGGCTGTCTCCGTA
CTTGACACGTCTTTCCAAGGGCCTGTCTTGGTACCGCCCCCACCTCTACC
TTCGCAAAAGTGGGACAGGTGGACACTCTGATGATGCGAAGGGAATTTTC
ACCTGTGCGCCCATCCCCCAGGGTACTGCTGTCCTGTCCTGGGCTGGCAA
GGTTGTACATGCTGACAGGCTGGCCAAGTGCACGGAGGAAGAGCAGCACT
TCTCCCTGCAAGTTGCCGAGGATCTCTTCCAGATACCGGACGCAAGGAAC
CTGCGAGAGCTCCCCGACTTTGTGAACCACGGCTGCGAACCGACCTGCGG
CTTGCTCGACGCGACGACCCTGGTGGCGCTGCGGGACCTTCGCCAGGCGG
CGAAATCACGATGCGACTACGCCATGTCAACCGCCAACACCCTGGGCCAC
GCCTGCGACAACTTCAAGTGCGGTGCGGGGGCGGCGTCT
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