mRNA_H-akashiwo_Contig1044.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1044.3.1
Unique NamemRNA_H-akashiwo_Contig1044.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: W7U800_9STRA (Nucleolar GTP-binding protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U800_9STRA)

HSP 1 Score: 630 bits (1624), Expect = 7.880e-219
Identity = 313/478 (65.48%), Postives = 378/478 (79.08%), Query Frame = 1
Query:   43 SKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGAT------------DYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGDSETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGEADLRTVAVNVINDWQRGKLPYFVAPPRADG 1440
            SK SDNP R  S VK KGG LRD+ TINRL+MYRGGK IRNK GK++GGTLMM D+ G   +T  TGR+QP+RRWFGNTRVI+QE+LDRFREEMT +A+DP+S++LRRKK+P+GLL ++E AQ RMNLL+TE +   F     RKRPKL+ G T            DY+ LL   +     Y+A   + ADG +    D+RV RR  LFDKGQS+RIW ELYKV+DCSDVVIQVLDARN+PGTRC  +E HLKKNA+HKH + ++NKCDLVP+W V+ WVR LS+ +PTLAFHASI N+FGKG+LINLLRQY+KLHQDKK ISVGV+GYPNVGKSSIINTLK KKVCK APVPGETKVWQYITLM+RI+LIDCPG+V + GD ET IVLKGVVRAERLPDPTEF+ A+LE VK +Y+   YG+  W+DA DF+ +LA++ G+L+K GE DL TVAV++IND+QRGKLP+FV PP  +G
Sbjct:   12 SKSSDNPNRKASDVKHKGGKLRDRATINRLQMYRGGKPIRNKKGKVVGGTLMMKDKVGGQAITGATGRVQPDRRWFGNTRVISQEDLDRFREEMTTRAADPFSIVLRRKKIPMGLLVDSEKAQ-RMNLLQTESFQATFGAKSTRKRPKLSSGVTEAAPRGVPSGNGDYASLLQRVEVEQAKYQAP--EHADGALVEELDYRVERRHDLFDKGQSRRIWGELYKVIDCSDVVIQVLDARNIPGTRCAHLERHLKKNASHKHLILIVNKCDLVPAWVVRRWVRLLSQHYPTLAFHASITNAFGKGSLINLLRQYAKLHQDKKQISVGVVGYPNVGKSSIINTLKSKKVCKVAPVPGETKVWQYITLMKRIYLIDCPGIVYDTGDDETAIVLKGVVRAERLPDPTEFVPAILEEVKREYVVRTYGVREWDDAQDFMTKLAKKTGKLVKGGEPDLNTVAVSLINDFQRGKLPHFVPPPVKEG 486          
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: A0A5D6XVC1_9STRA (Nucleolar GTP-binding protein 2 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVC1_9STRA)

HSP 1 Score: 617 bits (1592), Expect = 5.750e-216
Identity = 313/466 (67.17%), Postives = 368/466 (78.97%), Query Frame = 1
Query:   31 INKKSKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGDSETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGEADLRTVAVNVINDWQRGKLPYFVAPP 1428
            IN     +DNP R     +QK  N+RDK TINRL MYR   AIRNK GK++GGTLMM ++ G   +TAT+GRIQP+RRWFGNTRV+ Q+ELD+FR EM+ +A+DPYSV+LR +KLP+GLLQ+AE    RM LLETE Y DVF G R RKR K+A  ATDYS LL  AQ   D+YEAKG   +D N+   +DF+V     +F KGQSKRIW ELYKVLDCSDVVIQVLDARNVPGTRC  +E H++KNAAHKH +FVINKCDLVP+W  K WV++LS+  PTLAFHAS+NN FGKGALINLLRQ++KLHQDKK ISVG+IGYPNVGKSS+IN L+KK+VCK AP+PGETKVWQYITLMRRIFLIDCPG+V + GD E + VLKGVVRAERLP PTEFI A+LERVK +YL   Y I SW+D  DFL QLA + G+LL +GE D   VAV +IND+QRGKLP+FVAPP
Sbjct:    5 INTTKASADNPNRK-LPQRQKAANMRDKATINRLNMYRNSGAIRNKKGKVVGGTLMMGNKQGGQAITATSGRIQPDRRWFGNTRVVGQKELDKFRNEMSLKAADPYSVVLRSRKLPMGLLQDAEKVT-RMKLLETESYDDVFNGKRTRKRAKIA--ATDYSALLDRAQAGADSYEAKG---SDRNIHVEQDFKVETSHDVFSKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIRKNAAHKHLIFVINKCDLVPNWVTKKWVQKLSETTPTLAFHASMNNPFGKGALINLLRQFAKLHQDKKQISVGLIGYPNVGKSSVINALRKKRVCKVAPIPGETKVWQYITLMRRIFLIDCPGIVYDQGDDEVETVLKGVVRAERLPAPTEFIAAILERVKKEYLTKVYQIESWKDEWDFLEQLALKCGKLLPKGEPDFNNVAVQMINDFQRGKLPWFVAPP 463          
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: K3WX25_GLOUD (Nucleolar GTP-binding protein 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WX25_GLOUD)

HSP 1 Score: 603 bits (1556), Expect = 1.400e-210
Identity = 302/466 (64.81%), Postives = 369/466 (79.18%), Query Frame = 1
Query:   31 INKKSKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGDSETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGEADLRTVAVNVINDWQRGKLPYFVAPP 1428
            IN K   +DNP R   K +QK  N+RDK TINRL MYR   AIRNK GKI+GG+LMM ++ G  ++T+ + R+QP+RRWFGNTRV+ Q+ELD+FR EM+ +A+DPYSV+LR +KLP+GLLQ++E    RM LLETE + DVF G R RKR K+A  A DY  LL+  Q   D+YEAKG   +D N+   +DF+V     +F+KGQSKRIW ELYKVLDCSDVVIQVLDARNVPGTRC  +E H+KKNAAHKH +FVINKCDLVP+W  K WV++LS+  PTLAFHAS+NN FGKGALINLLRQ++KLHQDKK ISVG+IGYPNVGKSS+IN L+KK+VCK AP+PGETKVWQYITLMRRIFLIDCPG+V + GD E + VLKGVVRAE+LP PT+FI A+L+RVK +YL   Y I SW+D  DFL Q+A + G+LL++GE D   VAV +IND+QRGK+P+FVAPP
Sbjct:    5 INTKKASADNPNRQVPK-RQKAANMRDKATINRLNMYRNSGAIRNKKGKIVGGSLMMGNKQGGQEITSGSARVQPDRRWFGNTRVVGQKELDKFRNEMSLKAADPYSVVLRSRKLPMGLLQDSEKVT-RMKLLETESFEDVFNGKRTRKRAKIA--ANDYESLLSRVQTTTDSYEAKG---SDRNIHVEQDFKVEVSHDVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIKKNAAHKHLIFVINKCDLVPNWVTKKWVQKLSETTPTLAFHASMNNPFGKGALINLLRQFAKLHQDKKQISVGLIGYPNVGKSSVINALRKKRVCKVAPIPGETKVWQYITLMRRIFLIDCPGIVYDQGDDEVETVLKGVVRAEKLPQPTDFIPAILDRVKKEYLTKVYHIESWKDEWDFLEQMAIKCGKLLQKGEPDFNNVAVQMINDYQRGKIPWFVAPP 463          
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: A0A8K1C6Q5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6Q5_PYTOL)

HSP 1 Score: 595 bits (1533), Expect = 3.480e-207
Identity = 303/472 (64.19%), Postives = 363/472 (76.91%), Query Frame = 1
Query:   13 GVKHAAINKKSKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGDSETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGEADLRTVAVNVINDWQRGKLPYFVAPP 1428
            G K   IN K   +DNP R   K +QK  N+RDK TINRL MYR   AIRNK GKI+GG+LMM +R    ++T    RIQP+RRWFGNTRVI Q ELD+FR EM+ +A+DPYSV+LR +KLP+GLLQ++E  Q RM LLETE Y DVF G R RKR K+A  A DY  LL  AQ   + YEAKG   +D N+   +DF+      +F KGQS+RIW ELYKVLDCSDVVIQVLDARNVPGTRC  +E H++KNAAHKH +FVINKCDLVP+W  K WV++LS+  PTLAFHAS+NN+FGKGALINLLRQ++KLHQDKK ISVG+IGYPNVGKSS+IN L+KKKVCK AP+PGETKVWQYITLMRRIFLIDCPG+V + GD E + VLKGVVRAERLP PT+F+  +L+RVK +Y+   Y I +W+D  DFL QLA + G+LL +GE D   VAV +IND+QRGKLP+F+ PP
Sbjct:    3 GGKMKGINTKKASADNPNRQIPK-RQKAANMRDKATINRLNMYRNSGAIRNKKGKIVGGSLMMKNRTAGQEITGQA-RIQPDRRWFGNTRVIGQRELDKFRNEMSIKAADPYSVVLRTRKLPMGLLQDSEKVQ-RMKLLETESYEDVFNGKRTRKRAKIA--ANDYEALLNRAQEGAEQYEAKG---SDRNIVVQQDFKEEVSHDVFSKGQSRRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVENHIRKNAAHKHLIFVINKCDLVPNWVTKKWVQKLSETTPTLAFHASLNNAFGKGALINLLRQFAKLHQDKKQISVGLIGYPNVGKSSVINALRKKKVCKVAPIPGETKVWQYITLMRRIFLIDCPGIVYDTGDDEVETVLKGVVRAERLPQPTDFVPGILQRVKKEYIVKVYNIDTWKDEWDFLEQLALKMGKLLPKGEPDFNNVAVQMINDFQRGKLPWFLPPP 466          
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: M4BSB5_HYAAE (Nucleolar GTP-binding protein 2 n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BSB5_HYAAE)

HSP 1 Score: 592 bits (1527), Expect = 2.460e-206
Identity = 300/499 (60.12%), Postives = 371/499 (74.35%), Query Frame = 1
Query:   31 INKKSKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGDSETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGEADLRTVAVNVINDWQRGKLPYFVAPPRADGSAXXXXXXXXXXXXXXXYGDDDAPTLVDE 1527
            IN      DNP R     +QK  N+RDK+TI RL MYR    IRNK GKI+GGTLMM ++ G  ++T+ +GR+QP+RRWFGNTRV+ Q+ELD+FR EM+ + +DPYSV+LR +KLP+GLLQE++    RM LLETE Y DVF G R RKR K+A  ATDY+ LL+ AQ + + YE KG    D N+   ++F+      +F+KGQSKRIW ELYKVLDCSDVVIQVLDARNVPGTRC  +E H++KNA+HKH +FVINKCDLVP+W  K WV++LS+  PTLAFHAS++N FGKGALINLLRQ++KLHQ+KK ISVG+IGYPNVGKSS+IN L+KKKVCK AP+PGETKVWQYITLMRRIFLIDCPG+V + GD E + VLKGVVRAERLP PT+FI  +LERVK ++L   YGI  W+D  DFL +LA + G+LL +GE D   VAV++IND+QRGKLP+F+APP                       D D P ++DE
Sbjct:    5 INTTKASGDNPNRK-VPTRQKAANMRDKSTIKRLNMYRNSGPIRNKGGKIVGGTLMMKNKVGGQEITSASGRVQPDRRWFGNTRVVGQKELDKFRNEMSLKTADPYSVVLRTRKLPMGLLQESDKTS-RMKLLETESYDDVFNGKRGRKRAKVA--ATDYASLLSKAQESAEKYETKGN---DRNIVVEQEFKDEVSHDVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIRKNASHKHLIFVINKCDLVPNWVTKRWVQKLSETTPTLAFHASMSNPFGKGALINLLRQFAKLHQEKKQISVGLIGYPNVGKSSVINALRKKKVCKVAPIPGETKVWQYITLMRRIFLIDCPGIVYDTGDDEIETVLKGVVRAERLPQPTDFILTILERVKKEFLIKVYGIEEWKDEWDFLEKLANKCGKLLPKGEPDYNNVAVHMINDYQRGKLPWFIAPPMRAEELAALEQKGDDAPLNEAEADKDEPVVLDE 496          
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: A0A0P1B5V0_PLAHL (Nucleolar GTP-binding protein 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5V0_PLAHL)

HSP 1 Score: 588 bits (1516), Expect = 1.150e-204
Identity = 293/466 (62.88%), Postives = 367/466 (78.76%), Query Frame = 1
Query:   31 INKKSKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGDSETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGEADLRTVAVNVINDWQRGKLPYFVAPP 1428
            IN     +DNP R   K +QK  N+RDK+TI RL MYR    IRNK GK++GG+LMM ++AG  ++T+T+GR+QP+RRWFGNTRV+ Q+ELD+FR EM+ +A+DPYSV+LR +KLP+GLLQE+     RM LL+TE Y +VF G R+RKR K+   ATDY+ LL+ A+   D YE KG    D N+   +DF+      +F+KGQSKRIW ELYKVLDCSDVVIQVLDARNVPGTRC  +E H++KNAAHKH +FVINKCDLVP+W  K WV++LS+  PTLAFHAS++  FGKGALINLLRQ++KLHQ+KK ISVG+IGYPNVGKSS+IN L+KKKVCK AP+PGETKVWQYITLMRRIFLIDCPG+V + GD E + VLKGVVRAERLP PT+FI  +L+RVK +++   YGI  W+D  DFL +LA + G+LL++GE D   VAV++IND+QRGKLP+F+APP
Sbjct:    5 INTTKASADNPNRKIPK-RQKAANMRDKSTIKRLNMYRNSGPIRNKAGKVVGGSLMMKNKAGGQEITSTSGRVQPDRRWFGNTRVVGQKELDKFRNEMSLKAADPYSVVLRTRKLPMGLLQESNKTT-RMKLLDTESYQEVFNGKRSRKRAKID--ATDYAALLSKAKENVDKYETKG---PDRNIVVEQDFKEEVSHDVFNKGQSKRIWGELYKVLDCSDVVIQVLDARNVPGTRCEHVEKHIRKNAAHKHLIFVINKCDLVPNWVTKRWVQKLSETTPTLAFHASMSKPFGKGALINLLRQFAKLHQEKKQISVGLIGYPNVGKSSVINALRKKKVCKVAPIPGETKVWQYITLMRRIFLIDCPGIVYDTGDDEIETVLKGVVRAERLPQPTDFILTILQRVKKEFIVKVYGIDEWKDEWDFLEKLANKSGKLLQKGEPDYNNVAVHMINDYQRGKLPWFIAPP 463          
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: A0A7R9UBE2_9STRA (Nucleolar GTP-binding protein 2 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE2_9STRA)

HSP 1 Score: 574 bits (1479), Expect = 1.910e-200
Identity = 289/424 (68.16%), Postives = 339/424 (79.95%), Query Frame = 1
Query:   13 GVKHAAINKKSKGSDNPLRDGSKVKQK--GGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGDSETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIP 1278
            G KHAA+NKKS  +DNP RDGS+ K K  GG +RDK TI RLKMYR GKAIRNK G++IGGTL M DRAGDV++TA TGR+QP+RRWFGNTR +A EELD FRE+MT +A+DPYSVILRRKK+P+GLL EA   +   +LL+ E Y   F   R RKRPKL E  +  + L+A+A+ A +AYE KGG GAD NVER  D        +F KGQSKRIWSELYKVLDCSDVV+QVLDARN+PGTR   IE +L+K+AAHKH +F++NKCDLVP+W  + WVR LS  +PT+AFHASI+NSFGKGALINLLRQ+SKLH DKK ISVG+IGYPNVGKSSIINTL KKKVCK AP+PGETKVWQYITLMRRIFLID PGVV + G+ E + VLKGVVRAERLPDPT F+  +LERVK +Y+  AYG+P
Sbjct:    3 GGKHAALNKKSTSADNPNRDGSRKKSKRSGGTMRDKTTIERLKMYRSGKAIRNKKGEVIGGTLQMADRAGDVQITAQTGRVQPDRRWFGNTRTVAPEELDAFREQMTTKAADPYSVILRRKKVPMGLLAEAREKRDGGHLLQAESYESTFGARRTRKRPKLGEQQSSLTALMASAEKATEAYEQKGGAGADTNVERELDHYEAVSHDVFAKGQSKRIWSELYKVLDCSDVVLQVLDARNIPGTRSSHIERYLRKHAAHKHLVFIVNKCDLVPAWVARKWVRALSSDYPTIAFHASISNSFGKGALINLLRQFSKLHGDKKEISVGIIGYPNVGKSSIINTLMKKKVCKVAPIPGETKVWQYITLMRRIFLIDSPGVVHDEGEDEVETVLKGVVRAERLPDPTSFVAPILERVKKEYISRAYGLP 426          
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: F0W5L7_9STRA (Nucleolar GTP-binding protein 2 n=2 Tax=Albugo TaxID=65356 RepID=F0W5L7_9STRA)

HSP 1 Score: 573 bits (1478), Expect = 3.060e-199
Identity = 295/472 (62.50%), Postives = 363/472 (76.91%), Query Frame = 1
Query:   16 VKHAAINKKSKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGD-SETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGEADLRTVAVNVINDWQRGKLPYFVAPP 1428
             KH  IN K   +DNP R   K +QK  N+RDK+TI+RL MYRGG  IRN  GKI+GGTLMM ++ G  K   ++ R+QP+RRWFGNTRV++Q+ELDRFR EM+ QASDPYS++LR +KLP+GL+Q+A     RM LLETE Y DVF G R RKR K  E   DY  LL   Q   + Y++KG   +D N++   +F+      +F+KGQSKRIW ELYKVLDCSDVVIQVLDAR+VPGTRC ++EAHL+K+A+HKH +FVINKCDLVP+W  K W + L +  PTL FHASI N FGKGALINLLRQ+++LH DKK ISVGVIG+PNVGKSS+IN L+KKKVC  AP+PGETKVWQYITLMRRIFLIDCPGVV ++G   E + VLKG+VRAERLP PT+FIGA+L+RVK +Y+   YGI  W+D  DFL QLA++ G+LL++GE D   VAV+VIND+QRGKLP+FV+PP
Sbjct:    2 TKHNGINTKKASADNPNRKIPK-RQKAANMRDKSTIHRLNMYRGGGPIRNAKGKIVGGTLMMANKQGG-KDIQSSARVQPDRRWFGNTRVVSQKELDRFRSEMSLQASDPYSIVLRDRKLPMGLIQDATKVS-RMKLLETETYRDVFDGKRVRKRMK--ESNLDYESLLGKVQKETEKYDSKG---SDSNIKIEPEFKDQVSHDIFNKGQSKRIWGELYKVLDCSDVVIQVLDARDVPGTRCRQVEAHLRKDASHKHLIFVINKCDLVPNWVAKKWAQILRETTPTLVFHASITNPFGKGALINLLRQFARLHPDKKQISVGVIGFPNVGKSSVINALRKKKVCNVAPIPGETKVWQYITLMRRIFLIDCPGVVYDSGAVDEVETVLKGIVRAERLPQPTDFIGAILDRVKKEYVVNVYGIEQWKDEWDFLDQLARKSGKLLQKGEPDFNNVAVHVINDFQRGKLPWFVSPP 465          
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: D8LTC1_ECTSI (Nucleolar GTP-binding protein 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTC1_ECTSI)

HSP 1 Score: 580 bits (1494), Expect = 4.030e-199
Identity = 297/467 (63.60%), Postives = 344/467 (73.66%), Query Frame = 1
Query:   40 KSKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGDSETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGEADLRTVAVNVINDWQRGKLPYFVAPPRADG 1440
            KS  S NP R    +K  GGNLRDK TINRL MY+  K IR+K GK++GG  MM +R+GD  +TA TGR+ P+RRWFGNTRVI QEELD+FREEM+ +++DPYSV+LRRKKLP+GLLQE +    RMNLLETE Y+DV   GR RKRPKL  G  D S LLA+A+                                               VLDCSDVVIQVLDARNVPGTRCP +E HLKKNA+HKH +FVINK DLVP+W  K WV+ LS  HPTLAFHASI NSFGKGALINLLRQ++KLH DKK ISVGV+GYPNVGKSSIINTLKKKKVCK APVPGETKVWQYI LMRRIF++DCPGVV + GD E +IVLKGVVRAE+LPDPT+F+ A+L RVK +Y+R  YG+ +WEDA DF+ +LA R GRLL  GE D  +VAVN+IND+QRGKLPYFVAPP A+G
Sbjct:    4 KSGSSANPHRSTDGLKANGGNLRDKATINRLNMYKA-KGIRDKKGKLVGGAYMMKNRSGDQAITAETGRVAPDRRWFGNTRVIKQEELDKFREEMSTRSTDPYSVVLRRKKLPMGLLQEPDKVS-RMNLLETESYSDVLANGRRRKRPKLGGGVNDLSTLLASAE-----------------------------------------------VLDCSDVVIQVLDARNVPGTRCPHLERHLKKNASHKHLIFVINKVDLVPTWVTKKWVKLLSATHPTLAFHASITNSFGKGALINLLRQFAKLHPDKKQISVGVVGYPNVGKSSIINTLKKKKVCKVAPVPGETKVWQYIALMRRIFIVDCPGVVYDDGDDEIEIVLKGVVRAEKLPDPTDFVPAILSRVKEEYVRRLYGVAAWEDATDFMTKLAARSGRLLAGGEPDFHSVAVNIINDYQRGKLPYFVAPPLAEG 421          
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Match: W4HBT8_9STRA (Nucleolar GTP-binding protein 2 n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HBT8_9STRA)

HSP 1 Score: 558 bits (1437), Expect = 2.170e-192
Identity = 293/473 (61.95%), Postives = 349/473 (73.78%), Query Frame = 1
Query:   19 KHAAINKKSKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGGKAIRNKDGKIIGGTLMMNDRAGDVKMTATTG--RIQPNRRWFGNTRVIAQEELDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYADVFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTEDFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRIEAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINNSFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCKTAPVPGETKVWQYITLMRRIFLIDCPGVVVEA-GDSETDIVLKGVVRAERLPDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGEADLRTVAVNVINDWQRGKLPYFVAPP 1428
            K   +N K   SDNP R   K KQK  N+RDK TI RL MYR   AIRNK+GKI+GG+LMM  R G V M   T   RI P+RRWFGNTRV+ Q+ELD+FR EM  +A+DPYSV+LR +KLP+ L+Q++ A   RM LLETE + + F   R+RKR KL  G  D   L+  A    D YE KG    D N+E  E+F+      +F+KGQS+RIW ELYKVLDCSDVVIQVLDARNVPGTR   IE HL+ NAAHKH ++VINKCDLVP+W  K WV+ LSK  PTLAFHAS+N+ FGKGALINLLRQ++KLHQ+KK ISVG+IGYPNVGKSS+IN L+KK+VCK AP+PGETKVWQYITLMRRIFLIDCPGVV +   D E + VLKGVVRAE+LP P EFI  +L+RVK +++   YGIP W D   FL QLA + G+LL +GEAD   VAV VIND+ RGKLP+F+APP
Sbjct:    9 KRLGLNTKGASSDNPNRKIPK-KQKAANMRDKGTIKRLNMYRNSGAIRNKEGKIVGGSLMMAGRQGGVTMNDPTASSRIAPDRRWFGNTRVVGQKELDKFRNEMHVKAADPYSVVLRTRKLPMSLIQDS-AKVTRMKLLETETFEETFGKQRSRKRAKL-NGVGDLEALMNRASDQADKYETKG---VDRNIEVVEEFKDATSHDVFNKGQSRRIWGELYKVLDCSDVVIQVLDARNVPGTRSEHIERHLRSNAAHKHLVYVINKCDLVPNWVTKKWVQILSKTTPTLAFHASLNSPFGKGALINLLRQFAKLHQEKKQISVGIIGYPNVGKSSVINALRKKRVCKVAPIPGETKVWQYITLMRRIFLIDCPGVVYDGVNDGEVETVLKGVVRAEKLPQPAEFIQPILDRVKKEHVIKVYGIPDWTDDNHFLDQLAIKSGKLLPKGEADHNNVAVQVINDFIRGKLPWFIAPP 475          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1044.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7U800_9STRA7.880e-21965.48Nucleolar GTP-binding protein 2 n=2 Tax=Monodopsid... [more]
A0A5D6XVC1_9STRA5.750e-21667.17Nucleolar GTP-binding protein 2 n=1 Tax=Pythium br... [more]
K3WX25_GLOUD1.400e-21064.81Nucleolar GTP-binding protein 2 n=1 Tax=Globispora... [more]
A0A8K1C6Q5_PYTOL3.480e-20764.19Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BSB5_HYAAE2.460e-20660.12Nucleolar GTP-binding protein 2 n=22 Tax=Peronospo... [more]
A0A0P1B5V0_PLAHL1.150e-20462.88Nucleolar GTP-binding protein 2 n=1 Tax=Plasmopara... [more]
A0A7R9UBE2_9STRA1.910e-20068.16Nucleolar GTP-binding protein 2 (Fragment) n=1 Tax... [more]
F0W5L7_9STRA3.060e-19962.50Nucleolar GTP-binding protein 2 n=2 Tax=Albugo Tax... [more]
D8LTC1_ECTSI4.030e-19963.60Nucleolar GTP-binding protein 2 n=2 Tax=Ectocarpus... [more]
W4HBT8_9STRA2.170e-19261.95Nucleolar GTP-binding protein 2 n=10 Tax=Aphanomyc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1044contigH-akashiwo_Contig1044:305875..307503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog65071.PYU1_T009523
PFAMsMMR_HSR1,NGP1NT
Model size1629
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.29e-211
EggNOG OGsCOG1161@1|root,KOG2423@2759|Eukaryota,1MEPE@121069|Pythiales
Ec32 ortholog descriptionNgp1, nucleolar GTPase
Ec32 orthologEc-12_006010.1
DescriptionNucleolar GTP-binding protein 2
Cds size1629
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387061.5518527-CDS-H-akashiwo_Contig1044:305874..3075031681387061.5518527-CDS-H-akashiwo_Contig1044:305874..307503Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1044 305875..307503 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1044.3.1prot_H-akashiwo_Contig1044.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1044 305875..307503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1044.3.1

>prot_H-akashiwo_Contig1044.3.1 ID=prot_H-akashiwo_Contig1044.3.1|Name=mRNA_H-akashiwo_Contig1044.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=543bp
MGKHGVKHAAINKKSKGSDNPLRDGSKVKQKGGNLRDKNTINRLKMYRGG
KAIRNKDGKIIGGTLMMNDRAGDVKMTATTGRIQPNRRWFGNTRVIAQEE
LDRFREEMTAQASDPYSVILRRKKLPIGLLQEAEAAQQRMNLLETEGYAD
VFTGGRNRKRPKLAEGATDYSRLLAAAQGAGDAYEAKGGQGADGNVERTE
DFRVIRRESLFDKGQSKRIWSELYKVLDCSDVVIQVLDARNVPGTRCPRI
EAHLKKNAAHKHFLFVINKCDLVPSWCVKGWVRELSKAHPTLAFHASINN
SFGKGALINLLRQYSKLHQDKKNISVGVIGYPNVGKSSIINTLKKKKVCK
TAPVPGETKVWQYITLMRRIFLIDCPGVVVEAGDSETDIVLKGVVRAERL
PDPTEFIGAVLERVKPQYLRAAYGIPSWEDAPDFLAQLAQRQGRLLKEGE
ADLRTVAVNVINDWQRGKLPYFVAPPRADGSAAAAAPGGGGGGEDDRYGD
DDAPTLVDEVAAGAKVEGDEEGEGASGEEEEEEGGGEGQGEEE
back to top

mRNA from alignment at H-akashiwo_Contig1044:305875..307503-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1044.3.1 ID=mRNA_H-akashiwo_Contig1044.3.1|Name=mRNA_H-akashiwo_Contig1044.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1629bp|location=Sequence derived from alignment at H-akashiwo_Contig1044:305875..307503- (Heterosigma akashiwo CCMP452)
ATGGGAAAGCACGGGGTGAAGCACGCGGCCATCAACAAGAAGTCAAAAGG CTCGGATAACCCGCTCAGAGATGGGTCCAAGGTCAAGCAAAAGGGCGGCA ACTTGCGCGACAAGAACACCATAAACCGTCTGAAAATGTACAGAGGAGGT AAAGCTATCCGTAACAAGGACGGTAAGATCATCGGCGGCACCCTCATGAT GAACGACCGGGCGGGCGACGTGAAAATGACCGCCACGACCGGCCGCATCC AACCCAACCGCCGGTGGTTCGGCAACACCCGGGTGATCGCCCAGGAGGAG CTGGACCGGTTCCGTGAGGAGATGACCGCGCAGGCCTCAGACCCGTACAG CGTGATCCTCCGGCGGAAGAAGCTGCCCATCGGGCTGCTGCAGGAGGCCG AGGCCGCGCAGCAGCGCATGAACCTGCTGGAGACGGAGGGTTACGCGGAC GTGTTCACGGGCGGGCGCAACCGCAAGCGGCCCAAGCTGGCCGAAGGCGC CACGGACTACTCGCGGCTGCTGGCGGCCGCGCAGGGCGCGGGCGACGCCT ACGAGGCCAAGGGCGGCCAGGGGGCCGACGGGAACGTGGAGCGCACGGAG GACTTCCGCGTGATCCGCCGGGAGTCGCTCTTCGACAAGGGCCAGTCCAA GCGCATCTGGAGCGAGCTGTACAAGGTGCTGGACTGCTCGGACGTGGTCA TCCAGGTGCTGGACGCCCGCAACGTGCCGGGCACGCGCTGCCCGCGCATC GAGGCGCACCTCAAGAAGAACGCCGCGCACAAGCACTTCCTCTTCGTGAT CAACAAGTGCGACCTCGTGCCCAGCTGGTGCGTCAAGGGCTGGGTGCGCG AGCTGAGCAAGGCGCACCCCACGCTGGCCTTCCACGCGTCCATCAACAAC TCCTTCGGCAAGGGCGCACTGATCAACCTGCTCCGCCAATACTCCAAGCT GCACCAGGACAAGAAGAACATCTCCGTGGGCGTCATCGGCTACCCCAACG TCGGCAAGAGCTCCATCATCAACACCCTCAAGAAGAAGAAGGTCTGCAAG ACCGCGCCCGTGCCGGGGGAGACCAAGGTCTGGCAGTACATCACGCTCAT GCGGCGCATCTTCCTCATCGACTGCCCCGGGGTGGTGGTCGAGGCCGGGG ACTCGGAGACCGACATTGTGCTCAAGGGCGTGGTGCGCGCCGAGCGGCTG CCCGACCCGACCGAGTTCATCGGCGCCGTGCTGGAGCGCGTGAAGCCGCA GTACCTGCGCGCGGCCTACGGCATCCCGTCCTGGGAGGACGCGCCCGACT TCCTGGCGCAGCTGGCCCAGCGGCAGGGCCGGCTGCTCAAGGAGGGCGAG GCCGACCTGCGCACCGTGGCCGTCAACGTGATCAACGACTGGCAGCGGGG GAAGCTGCCCTACTTTGTGGCCCCCCCGCGGGCCGACGGCAGCGCCGCTG CCGCCGCCCCTGGCGGTGGCGGCGGCGGGGAGGACGACCGCTACGGGGAC GACGACGCCCCCACTCTGGTGGACGAGGTGGCGGCCGGGGCCAAGGTGGA GGGCGACGAGGAGGGCGAGGGGGCGTCTGGCGAGGAGGAGGAGGAGGAGG GGGGGGGCGAAGGGCAGGGAGAAGAAGAA
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1044:305875..307503-

>mRNA_H-akashiwo_Contig1044.3.1 ID=mRNA_H-akashiwo_Contig1044.3.1|Name=mRNA_H-akashiwo_Contig1044.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1629bp|location=Sequence derived from alignment at H-akashiwo_Contig1044:305875..307503- (Heterosigma akashiwo CCMP452)
ATGGGAAAGCACGGGGTGAAGCACGCGGCCATCAACAAGAAGTCAAAAGG
CTCGGATAACCCGCTCAGAGATGGGTCCAAGGTCAAGCAAAAGGGCGGCA
ACTTGCGCGACAAGAACACCATAAACCGTCTGAAAATGTACAGAGGAGGT
AAAGCTATCCGTAACAAGGACGGTAAGATCATCGGCGGCACCCTCATGAT
GAACGACCGGGCGGGCGACGTGAAAATGACCGCCACGACCGGCCGCATCC
AACCCAACCGCCGGTGGTTCGGCAACACCCGGGTGATCGCCCAGGAGGAG
CTGGACCGGTTCCGTGAGGAGATGACCGCGCAGGCCTCAGACCCGTACAG
CGTGATCCTCCGGCGGAAGAAGCTGCCCATCGGGCTGCTGCAGGAGGCCG
AGGCCGCGCAGCAGCGCATGAACCTGCTGGAGACGGAGGGTTACGCGGAC
GTGTTCACGGGCGGGCGCAACCGCAAGCGGCCCAAGCTGGCCGAAGGCGC
CACGGACTACTCGCGGCTGCTGGCGGCCGCGCAGGGCGCGGGCGACGCCT
ACGAGGCCAAGGGCGGCCAGGGGGCCGACGGGAACGTGGAGCGCACGGAG
GACTTCCGCGTGATCCGCCGGGAGTCGCTCTTCGACAAGGGCCAGTCCAA
GCGCATCTGGAGCGAGCTGTACAAGGTGCTGGACTGCTCGGACGTGGTCA
TCCAGGTGCTGGACGCCCGCAACGTGCCGGGCACGCGCTGCCCGCGCATC
GAGGCGCACCTCAAGAAGAACGCCGCGCACAAGCACTTCCTCTTCGTGAT
CAACAAGTGCGACCTCGTGCCCAGCTGGTGCGTCAAGGGCTGGGTGCGCG
AGCTGAGCAAGGCGCACCCCACGCTGGCCTTCCACGCGTCCATCAACAAC
TCCTTCGGCAAGGGCGCACTGATCAACCTGCTCCGCCAATACTCCAAGCT
GCACCAGGACAAGAAGAACATCTCCGTGGGCGTCATCGGCTACCCCAACG
TCGGCAAGAGCTCCATCATCAACACCCTCAAGAAGAAGAAGGTCTGCAAG
ACCGCGCCCGTGCCGGGGGAGACCAAGGTCTGGCAGTACATCACGCTCAT
GCGGCGCATCTTCCTCATCGACTGCCCCGGGGTGGTGGTCGAGGCCGGGG
ACTCGGAGACCGACATTGTGCTCAAGGGCGTGGTGCGCGCCGAGCGGCTG
CCCGACCCGACCGAGTTCATCGGCGCCGTGCTGGAGCGCGTGAAGCCGCA
GTACCTGCGCGCGGCCTACGGCATCCCGTCCTGGGAGGACGCGCCCGACT
TCCTGGCGCAGCTGGCCCAGCGGCAGGGCCGGCTGCTCAAGGAGGGCGAG
GCCGACCTGCGCACCGTGGCCGTCAACGTGATCAACGACTGGCAGCGGGG
GAAGCTGCCCTACTTTGTGGCCCCCCCGCGGGCCGACGGCAGCGCCGCTG
CCGCCGCCCCTGGCGGTGGCGGCGGCGGGGAGGACGACCGCTACGGGGAC
GACGACGCCCCCACTCTGGTGGACGAGGTGGCGGCCGGGGCCAAGGTGGA
GGGCGACGAGGAGGGCGAGGGGGCGTCTGGCGAGGAGGAGGAGGAGGAGG
GGGGGGGCGAAGGGCAGGGAGAAGAAGAA
back to top