mRNA_H-akashiwo_Contig1044.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 206 bits (525), Expect = 2.300e-59 Identity = 100/205 (48.78%), Postives = 142/205 (69.27%), Query Frame = 1 Query: 4 KVEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIGKHFQLFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWKRGVDNKCADALSRL 618 K+EAV KL RPE+KKQVR LG+ YYR +P F+ AAPL+ T+ P + WD++CE AF ++K SLTS P+L +P + + FIVE DAS+TG+G +L+Q+T G + P+ Y SRL S E NYSA +LE L + ++ Q+FR Y++G+ F L +D +SL+ L +K P+GR ARWLM L EF ++ ++++G ADALSRL Sbjct: 312 KIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTK-DKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTR-PIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYRKGKLMAPADALSRL 514
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 195 bits (496), Expect = 1.460e-56 Identity = 92/191 (48.17%), Postives = 133/191 (69.63%), Query Frame = 1 Query: 4 KVEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIGKHFQLFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWK 576 K+EAV KL RPE+KKQVR LG+ YYR +P F+ AAPL+ T+ P + WD++CE AF ++K SLTS P+L +P + + FIVE DAS+TG+G +L+Q+T G + P+ Y SRL S E NYSA +LE L + ++ Q+FR Y++G+ F L +D +SL+ L +K P+GR ARWLM L EF ++ +++ Sbjct: 312 KIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTK-DKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTR-PIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYR 500
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A0B7N4W3_9FUNG (RT_RNaseH_2 domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N4W3_9FUNG) HSP 1 Score: 186 bits (471), Expect = 1.180e-55 Identity = 93/197 (47.21%), Postives = 132/197 (67.01%), Query Frame = 1 Query: 34 PETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIGKHFQ--LFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWKRGVDNKCADALSRL 618 P + KQVR+FLG+ YYR I GF+ A LH +T+ + KI W +E +AF +LK+ LTS P+L+ PDF + F V CDAS +G+G +L Q T +G + P++++SR +EKNY LELLA+ S Q++RPYL+G FQ + SD SL LL K+P+G LARW+ ILSE++F + +++G N+ AD LSRL Sbjct: 48 PTSIKQVRSFLGLASYYRRFINGFARIARQLHEQTKTTK--KIAWTDEATKAFYELKERLTSYPILRKPDFNKPFEVVCDASISGLGAILTQRTEEGHEYPIIFSSRSLRGSEKNYGISKLELLAVVWSVQQYRPYLLGSPFQVTIISDHSSLAGLLKTKQPTGILARWIEILSEYNFKIVYRKGRINEAADFLSRL 242
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A2G8KDB9_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KDB9_STIJA) HSP 1 Score: 191 bits (485), Expect = 7.930e-53 Identity = 94/205 (45.85%), Postives = 133/205 (64.88%), Query Frame = 1 Query: 4 KVEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIGKHFQLFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWKRGVDNKCADALSRL 618 KVEA+ P TK VR+FLG+ GYYR +IP F+ A+PL + T+ S P IEW E CE+AF LK+ +T P+L+ PDF +DFI++CDAS GIG VL Q DG + P++Y SR S +E+ YS + E LAI + Q+ YL G+ F + +D + L L +K + RL RW ++L E++F+++ K+G DN ADALSR+ Sbjct: 701 KVEAIINWPTPLTKTDVRSFLGLTGYYRKLIPDFAQIASPLTDLTKKSKPTVIEWTEGCEQAFLSLKELITCKPVLKSPDFEKDFILQCDASERGIGSVLSQTGEDGSEHPIIYISRKLSRSEEVYSTIEKECLAIVWAVQKLYVYLFGRKFLIQTDHKPLVWLDQMKLHNKRLTRWSVVLQEYNFTIQHKKGTDNSNADALSRV 905
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A4Y2VDI0_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2VDI0_ARAVE) HSP 1 Score: 180 bits (457), Expect = 1.320e-52 Identity = 92/204 (45.10%), Postives = 125/204 (61.27%), Query Frame = 1 Query: 4 KVEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIGKHFQLFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWKRGVDNKCADALSR 615 K++AV RPET +R+FLG+C YYR + FS A PLH T + W EECE++FN LKQ+LTS P+L +P +DFI++ DAS GIG VL Q G+ + + Y S+ E+NY ELLAI S + FR YL G+ F L +D SL+ LLN K P G++ARW+ L E+DF ++ ++G + ADALSR Sbjct: 81 KIKAVVDWPRPETIHDLRSFLGLCTYYRRFVKNFSTIARPLHKLTETKS--NFNWTEECEKSFNSLKQALTSSPILTYPRTDKDFILDTDASNEGIGAVLSQNIGNEERV-IAYFSKSLGKPERNYCVTRKELLAIVKSIEHFRHYLYGQKFLLRTDHASLRWLLNFKEPEGQIARWIQRLQEYDFEIQHRKGTSHGNADALSR 281
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A267FMQ5_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FMQ5_9PLAT) HSP 1 Score: 189 bits (480), Expect = 3.880e-52 Identity = 96/206 (46.60%), Postives = 130/206 (63.11%), Query Frame = 1 Query: 4 KVEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIG-KHFQLFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWKRGVDNKCADALSRL 618 KVE + + P T ++V+ FLGM G+YR IPGFS TA LH+ + S W +CE AF +LK LT+ P+L+ PDF + F++ CD+S+ +G VL Q GD + PV + SR + AE+NYSA D ELLA+ S + FR YL+ F+++SD R LQ LL K P GRLARWL L +F F L ++ G+DN DALSR+ Sbjct: 192 KVEVIRSMPSPTTNEEVKRFLGMLGFYRRFIPGFSQTARVLHDVSVKSRD--FAWSSDCERAFRELKDRLTTAPVLRLPDFTKQFVLSCDSSQFAVGAVLSQLHGDA-ELPVAFASRTLNKAERNYSATDRELLALVWSLKHFRTYLLSVPSFRVYSDHRPLQGLLATKDPEGRLARWLSTLQQFSFELLYRPGMDNVVPDALSRV 394
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A1B6IU21_9HEMI (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6IU21_9HEMI) HSP 1 Score: 187 bits (476), Expect = 6.470e-52 Identity = 92/205 (44.88%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 4 KVEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIGKHFQLFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWKRGVDNKCADALSRL 618 K+EAV + +P+ +K++R F+G+C YYR +P F+ A PL + + +K W +CE AF KLK+ LT+ PLL +PDF + FI+ DAS IG VL QE +G++ P+ Y SR +SAE+NYS + ELLA+ + + FR YL G+ F L++D +++ LL+LK PS RL RW + L+E+D+ + K GV NK AD LSR+ Sbjct: 525 KIEAVKEFPQPKNEKEIRGFIGLCSYYRRHVPNFADIAKPLTKLIKKN--EKFNWTSDCETAFKKLKEKLTTEPLLIYPDFSKSFILSTDASNVAIGAVLGQEI-NGVEHPIAYASRQLNSAEQNYSVTERELLAVVWAVKYFRCYLYGRSFSLYTDHSAIKWLLSLKDPSSRLTRWALKLAEYDYKVYHKPGVKNKNADCLSRV 726
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A1X7TAF5_AMPQE (RT_RNaseH domain-containing protein n=4 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TAF5_AMPQE) HSP 1 Score: 175 bits (443), Expect = 1.580e-51 Identity = 87/205 (42.44%), Postives = 130/205 (63.41%), Query Frame = 1 Query: 4 KVEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIGKHFQLFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWKRGVDNKCADALSRL 618 K+EA+ +ARP+TKK VRTFLG+ GYYR + ++ A PL TR P+++ W E+ E AF KLK +LT+ PL++ P+F + FI++ DAS G+G +L Q + + PV Y S+ E+ YS + E LAI + + F YLIG+ F + +D R+LQ L K + RL RW +IL ++F+++ ++G+ N ADALSRL Sbjct: 18 KIEAIINMARPQTKKDVRTFLGITGYYRRFLQDYASIAEPLTELTRKKLPERVIWSEKAELAFQKLKTALTTAPLMKNPNFNQTFILQTDASGVGVGAILSQGEENLDEGPVAYFSKKLLPREQAYSTVEKECLAIILAIKHFSAYLIGRSFIIQTDHRALQWLHKFKEKNARLTRWSLILQPYNFTIQHRKGLANANADALSRL 222
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A2B4R9W3_STYPI (Retrovirus-related Pol polyprotein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R9W3_STYPI) HSP 1 Score: 176 bits (447), Expect = 3.110e-51 Identity = 90/204 (44.12%), Postives = 126/204 (61.76%), Query Frame = 1 Query: 7 VEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIGKHFQLFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWKRGVDNKCADALSRL 618 VE + RP TKKQVR+F+G+ GYYRD IP F+ AAPL + TR P+K+EW E E+A+ +K LTS P+L+ PD + + + DAS +GIG VLMQ+ + + PV Y S+ + AE+NYS + E LAI S +RF YL G F L +D L+ + + K +GRL RW M L + F ++ +G +N AD LSR+ Sbjct: 105 VEKIKDAPRPSTKKQVRSFMGLAGYYRDFIPNFAAIAAPLSDLTRKGQPNKVEWSEAQEKAYRTIKSYLTSEPILRLPDPAKTYFLRTDASNSGIGAVLMQKHNEKL-FPVCYASKKLTGAERNYSTIEKECLAIVWSIKRFHLYLYGVSFVLQTDHEPLKYMNSAKFNNGRLMRWAMFLQSYSFRVEAIKGSENVGADYLSRV 307
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Match: A0A4Y1ZPU2_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y1ZPU2_ARAVE) HSP 1 Score: 175 bits (444), Expect = 4.310e-51 Identity = 89/205 (43.41%), Postives = 125/205 (60.98%), Query Frame = 1 Query: 1 QKVEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNPDKIEWDEECEEAFNKLKQSLTSGPLLQFPDFRRDFIVECDASRTGIGGVLMQETGDGMKAPVVYTSRLTSSAEKNYSAFDLELLAIAHSCQRFRPYLIGKHFQLFSDQRSLQSLLNLKRPSGRLARWLMILSEFDFSLKWKRGVDNKCADALSR 615 +K++AV RP+ +R+FLG+C YYR + FS A PLH T + W +ECE++FN LKQ+LTS P+L +P +DFI++ DAS GIG VL Q TG+ + + Y S+ E+NY ELLAI S + F YL G+ F L +D SL+ LLN K P G++ARW+ L E+DF ++ ++G + ADALSR Sbjct: 58 EKIKAVVDWPRPDKIHDLRSFLGLCTYYRLFVKNFSTIARPLHKLTEAKS--NFNWTDECEKSFNSLKQALTSSPILTYPWTDKDFILDTDASNEGIGAVLSQNTGNEERV-IAYFSKSLGKPERNYCVTRKELLAIVKSIEHFHHYLYGRKFLLRTDHTSLRWLLNFKEPEGQIARWIQRLQEYDFEIQHRKGTSHGNADALSR 259 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1044.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1044.1.1 >prot_H-akashiwo_Contig1044.1.1 ID=prot_H-akashiwo_Contig1044.1.1|Name=mRNA_H-akashiwo_Contig1044.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=206bp QKVEAVSKLARPETKKQVRTFLGMCGYYRDMIPGFSMTAAPLHNKTRLSNback to top mRNA from alignment at H-akashiwo_Contig1044:244087..244704- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1044.1.1 ID=mRNA_H-akashiwo_Contig1044.1.1|Name=mRNA_H-akashiwo_Contig1044.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=618bp|location=Sequence derived from alignment at H-akashiwo_Contig1044:244087..244704- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1044:244087..244704- >mRNA_H-akashiwo_Contig1044.1.1 ID=mRNA_H-akashiwo_Contig1044.1.1|Name=mRNA_H-akashiwo_Contig1044.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=618bp|location=Sequence derived from alignment at H-akashiwo_Contig1044:244087..244704- (Heterosigma akashiwo CCMP452)back to top |