mRNA_H-akashiwo_Contig1042.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 318 bits (814), Expect = 5.040e-96 Identity = 179/450 (39.78%), Postives = 264/450 (58.67%), Query Frame = 1 Query: 1 LAKKIE-DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRVILSLAAEQGLSLSQLDVQTAFLNGTLTEELYMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRC*------------------------KVGDA--VTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEY--KANEDDINRFRP------WWGLLA---------------GSQPGQTLCCCRQGLQISEGSGNKSIKLGGGTILCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKALN 1200 LAKK + DG L KYK RL A+GYSQ G+DY TF+PVVS+ SLR +L++AA + + + +D++TAFL+G L E++YM+QPEG+ P V KLKKSLYGLKQ+P+C KV T +++YVDDI +AS+D ++ +K + Y ++D G++E+ LG+K+ R+ +TI +SQ FI++A KF P P++ +D+++N + + + + +FR W L S L L+ + +K + LGG L AY DADFC++R G+S +G+ +FLG SP++W+SR+Q VT TTEAEY++L DVMWL+ LL LG+KQ + EDN ACI+WA + TV++ RH+HV+YHY +E+ Q KEIEVKY++T Q+ D+FTK L+ Sbjct: 534 LAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 272 bits (696), Expect = 3.800e-85 Identity = 147/340 (43.24%), Postives = 203/340 (59.71%), Query Frame = 1 Query: 259 EFPDHVWKLKKSLYGLKQSPRC*KVGDAVTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYKANEDDINRFRPWWGLLAG----SQPGQTLCCCR-QGLQIS----------------EGSGNKSIKLGGGTILCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKALNEKSFE 1215 E DH+ L G + + G V +YVDD+ I+ + V+ K +L KY +TD G+L LG+K+ R+ K H+SQ+ FIKDAL KFG D+ P KTP+D T+DL+ +KA D N +R G LA ++P + Q QI+ +G+ ++S++LGG +L A+ D+DFC DRVDGKSVTGYI+FLGD+P+VW+S+LQ +VTT T EAEYLAL KD+MWLR LL E+G Q +PT V EDN+AC+ WA ++ V ++NRH HV+YH +E I + YI T +QV D+ TKALN +FE Sbjct: 2 ELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 341
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: A0A401H607_9APHY (Transposon Ty5-1 protein n=4 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H607_9APHY) HSP 1 Score: 265 bits (678), Expect = 6.230e-80 Identity = 164/451 (36.36%), Postives = 239/451 (52.99%), Query Frame = 1 Query: 16 EDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRVILSLAAEQGLSLSQLDVQTAFLNGTLTEELYMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPR----------------------C*KV---GDAVTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYKANEDDINRFRPWWGLLAG-----------------------SQPGQT-LCCCRQGLQISEGSGNKSIKLG--------GGTILCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKAL 1197 ++G + KYK RLVAKGYSQ PG+DY TF PVV ++R IL LAA + Q+DV+ A+LNGTL EE+YM QPEG+ D + V KLKK+LYGLKQS R C + GD + VT++VDD+ I +ND + LK L+ + +TD G+ +G++I R+ K+TI +SQ+++I+ L K G + P+DP L KE +D+ +R + L+ + PG ++ L+ G+ I G +I Y DAD+ D D KS++GY+ LG+ + W+S+ Q +V + TTEAEY+A E AK+ +WLR L E+GF+Q PT + EDNTA IS A + K++H V +HYVRE + K I++ Y T + + D+ TK+L Sbjct: 93 KEGEIIKYKARLVAKGYSQIPGMDYTETFVPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTY--RVCKLKKTLYGLKQSGREWNIVLNRKLLDARFKRLFSDPCAYIRIKGDKIEIVTVWVDDLLIFTNDCALMDQLKRELRNMFEVTDLGEPRKIVGIEIERDRSKRTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLE--KEEPETDDECDRDNGYASLVGSLMYAAIATRPDIAHAVQRLSSFTANPGMAHWTAAKRVLRYLSGTRELGIIYGPIADVKPEDQSIFVGYSDADYANDIRDRKSISGYLFKLGNGTITWSSKKQTTVASSTTEAEYMASAEAAKEAVWLRTLFKEIGFEQQDPTILFEDNTAAISIARDPQFHAKSKHFDVKHHYVREKLRDKYIDIHYCPTEDMIADILTKSL 539
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: A0A2N9FIJ5_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FIJ5_FAGSY) HSP 1 Score: 272 bits (696), Expect = 7.160e-79 Identity = 163/448 (36.38%), Postives = 248/448 (55.36%), Query Frame = 1 Query: 19 DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRVILSLAAEQGLSLSQLDVQTAFLNGTLTEELYMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRC*-------------------------KVGDAVTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYKANEDDI----NRFRPWWGLLAGS-------------------QPGQT-LCCCRQGLQISEGSGNKSIKL-GGGTILCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKALNEKSF 1212 DG + +YK RLVAKG+ QQ G+D+ TF+PVV P++R++LSLAA+ L QLD+ AFL+G L E++YM QP GF DP PDHV KL+KSLYGLKQ+PR + G V Y+ +YVDDI + N VA+L A L + + + D G L FLGL+I+ N + + V Q ++I D L+KF +C PA TP S++++ + + DD+ ++R G L + +P T L ++ L+ +G+ + I+ G + L A+ D+D+ D D +S TG VFLG++P+ W S+ Q +V+ +TEAEY AL A ++ WLR +L +LG T+ DNT+ I+ A+ + +H+ V+YH+VRE + ++ + +I+T +Q+ DLFTK L + F Sbjct: 598 DGSISRYKARLVAKGFHQQAGLDFDETFSPVVKPPTVRIVLSLAAQHQWPLRQLDISNAFLHGFLKEDVYMIQPPGFVDPTHPDHVCKLQKSLYGLKQAPRAWFERFTSHLLTIGFVASTADPSLFVLRTGSTVLYLLLYVDDIILTGNSSSAVASLIAQLAETFELKDLGPLRFFLGLQIDYN--RTGLFVHQRKYISDLLLKFNMTNCKPASTP------FSISQKLQPSTDDVLPDPTQYRSLVGALQYATFTRPDITYAVNQVCQYMHKPNSTHLVAAKRILRYLQGTLHLGIRFQSGSSSLTAFTDSDWAGDPYDRRSTTGITVFLGNNPITWVSKKQHTVSRSSTEAEYRALATGAAELAWLRQVLCDLGVYLPTAPTMWCDNTSAIALASNPVFHSRTKHIEVDYHFVRERVVRGDLHLHFISTEDQLADLFTKPLTTQRF 1037
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: A0A2N9F3A0_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F3A0_FAGSY) HSP 1 Score: 271 bits (692), Expect = 2.220e-78 Identity = 156/423 (36.88%), Postives = 237/423 (56.03%), Query Frame = 1 Query: 19 DGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRVILSLAAEQGLSLSQLDVQTAFLNGTLTEELYMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRC*-------------------------KVGDAVTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYKANEDDINRFRPWWGLLAGSQPGQTLCCCRQGLQISEGSGNKSIKLGGGTILCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKALNEKSF 1212 +G + +YK RLVAKG+ QQ G+D+ TF+PVV P++R++LSLAA+ SL QLD+ AFL+G L E++YM QP GF DP DHV KL+KSLYGLKQ+PR + G V Y+ +YVDDI + SN VA+L A L + + + D G L FLGL+I+ N + + V Q ++I D L+KF +C PA TP S++++ + + DD+ + L G+ T + + ++ G + L A+ D+D+ D D +S TG VFLG++P+ W S+ Q V+ +TEAEY AL A ++ WLR +L +LG T+ DNT+ I+ A+ + +H+ V+YH++RE + ++ + +I+T +Q+ DLFTK L + F Sbjct: 616 NGSISRYKARLVAKGFHQQAGLDFDETFSPVVKPPTVRIVLSLAAQHQWSLRQLDISNAFLHGFLKEDVYMIQPPGFVDPTHSDHVCKLQKSLYGLKQAPRAWFERFTSHLLTIGFVASTADPSLFVLRTGSTVLYLLLYVDDIILTSNSSSAVASLIAQLAETFELKDLGPLRFFLGLQIDYN--RTGLFVHQRKYISDLLLKFNMTNCKPASTP------FSISQKLQPSTDDVLPDPTQYRSLVGALQYAT---------FTRPNITYAVNQSGSSSLTAFTDSDWAGDPYDHRSTTGITVFLGNNPITWVSKKQHIVSRSSTEAEYRALATGAAELAWLRQVLCDLGVYLPTAPTMWCDNTSAIALASNPVFHSRTKHIEVDYHFIRERVVRGDLHLHFISTEDQLADLFTKPLTTQRF 1021
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: H3H4L3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4L3_PHYRM) HSP 1 Score: 271 bits (694), Expect = 4.570e-78 Identity = 159/461 (34.49%), Postives = 249/461 (54.01%), Query Frame = 1 Query: 7 KKIEDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRVILSLAAEQGLSLSQLDVQTAFLNGTLTEELYMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRC*-------------------------KVGDAVTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNK-EYKANEDDINRFRPWWG-------LLAGSQPG--------------------QTLCCCRQGLQISEGSG---NKSIKLGGGTILCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELG-FKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKALNEKSFEI 1218 K+ + G ++++K RLVAKG+SQ+ GIDY TFAPV S+R++LSLAA+ GL L Q+DV+TAFLNG L E++YM QP+G+ D + PDHV KLK+SLYGLKQSPR + G + +V +YVDD+ +AS+ D + + K L K++ +TD G+LE FLG++I + G + V Q++F+K L KFG P KTP DP + L+ N E +D + P+ L+ ++P Q L + LQ + G ++ +G +C Y DAD+ D +S +GY + + W S+ Q++V +TEAEY+AL E ++V+WL+ L ELG + + EDN I+ A ++ +H+ + YH+VRE + ++ ++Y++T++ + D+ TKA+ F + Sbjct: 709 KENQAGEVERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRDGQDMIFVALYVDDLVLASSSDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREDSVG----MCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEVVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAIPATQFSV 1165
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: A0A2N9H3I2_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H3I2_FAGSY) HSP 1 Score: 259 bits (662), Expect = 8.280e-78 Identity = 158/449 (35.19%), Postives = 241/449 (53.67%), Query Frame = 1 Query: 7 KKIEDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRVILSLAAEQGLSLSQLDVQTAFLNGTLTEELYMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRC*-------------------------KVGDAVTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLS-VNKEYKANEDDINRFRPWWG---LLAGSQPGQT-----------------LCCCRQGLQISEGSGNKSIKLGGGTI-LCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKALNEKSF 1212 K+ DG + +YK RL AKGY QQ G+DY TF+PVV ++R+ILS+AA+Q SL QLDV AFL+G L E +YM+QP GF DP++P HV +L+K+LYGLKQ+P + G V Y+ +YVDDI + N + +L L +++ I D G+L+ FLGL+I+ +H Q ++ D L KF C P TP + LS + K+ D FR G L ++P + L ++ L+ +G+ + + G + L A+ D+D+ D +D +S TG IVFLG +P+ W S+ Q +V +TEAEY AL CA D+ W+R +L +LG P T+ DN + ++ AT + +H+ V+YH++RE +++++ +I+T +Q+ D+ TKAL F Sbjct: 78 KRNSDGSIARYKARLDAKGYHQQQGMDYDETFSPVVKPATVRLILSIAAQQNWSLKQLDVSNAFLHGLLKENVYMQQPPGFIDPQYPKHVCQLQKALYGLKQAPCAWFERFTSHLLTMGFTPSLANPSLFLYRQGSTVVYLLLYVDDIIVTGNQPTAIQSLITKLAQEFDIKDLGQLKFFLGLQIDYRSSGFFVH--QHKYATDLLAKFNMSTCKPCSTPF---VSLSRIRKDDGIPLPDPTPFRSMVGGLQYLTFTRPDLSYAVNHICQFMHQPTDHHLVAAKRILRYVQGTLHHGLTFRPGPLSLTAFTDSDWAGDPMDRRSTTGLIVFLGHNPITWQSKKQPTVARSSTEAEYRALANCAADLAWVRMVLKDLGIFLHAPPTIWCDNLSALALATNPVFHARTKHVEVDYHFIREKVTNRDLQLHHISTDDQLADILTKALPSPRF 521
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: A0A401GA31_9APHY (Integrase catalytic domain-containing protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GA31_9APHY) HSP 1 Score: 265 bits (678), Expect = 1.200e-77 Identity = 167/453 (36.87%), Postives = 241/453 (53.20%), Query Frame = 1 Query: 16 EDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRVILSLAAEQGLSLSQLDVQTAFLNGTLTEELYMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPR----------------------C*KV---GDAVTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYKANEDDINRFRPWWGLLAG-----------------------SQPGQ---TLCCCRQGLQISEGSGNKSIKLG--------GGTILCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKAL 1197 ++G + KYK RLVAKGYSQ PG+DY TFAPVV ++R IL LAA + Q+DV+ A+LNGTL EE+YM QPEG+ D + V KLKK+LYGLKQS R C + GD + VT++VDD+ I +ND + LK L+ + +TD G+ +G++I R+ K+TI +SQ+++I+ L K G + P+DP L KE +D+ +R + L+ + PG T C L+ G+ I G +I Y DAD+ D D KS++GY+ LG+ ++W+S+ Q +V + TTEAEY+A E AK+ +WLR L E+GF+Q PT + EDNTA IS A + K++H V +HYVRE + K I++ Y T + + D+ TK+L Sbjct: 349 KEGEIIKYKARLVAKGYSQIPGMDYTETFAPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTY--RVCKLKKTLYGLKQSGREWNIVLNRKLLDAGFKRLFSDPCAYIRIKGDKIEIVTVWVDDLLIFTNDCALMDQLKRELRNMFEVTDLGEPRKIVGIEIERDRSKQTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLE--KEEPKTDDECDRDNGYASLVGSLMYAAIATRPDIAHAVQRLSSFTANPGMAHWTAAKCV--LRYLSGTRELGIIYGPIADVKPEDQSIFVGYSDADYANDIRDRKSISGYLFKLGNGTIMWSSKKQTTVASSTTEAEYMASAEAAKEAVWLRTLFKEIGFEQQDPTILFEDNTAAISIARDPQFHAKSKHFDVKHHYVREKLRDKYIDIHYCPTEDMIADILTKSL 795
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: A0A2N9IXX5_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IXX5_FAGSY) HSP 1 Score: 266 bits (681), Expect = 1.310e-77 Identity = 157/451 (34.81%), Postives = 243/451 (53.88%), Query Frame = 1 Query: 7 KKIEDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRVILSLAAEQGLSLSQLDVQTAFLNGTLTEELYMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRC*-------------------------KVGDAVTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYKANEDDINRFRPWWGLLAGSQ-----------------------PGQTLCCCRQGLQISEGSGNKSIKLGGGTI-LCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKALNEKSF 1212 K+ DG + +YK RLVAKGY QQ G+DY TF+PVV ++R+ILS+AA+Q SL QLDV AFL+G L E +YM+QP GF DP++P HV +L+K+LYGLKQ+PR + G V Y+ +YVDDI + N V +L L +++ I D G+L+ FLGL+I+ +H Q ++ D L KF C P TP +S+++ K + ++ P+ ++ G Q L ++ L+ +G+ + + G + L A+ D+D+ D +D +S TG IVFLG +P+ W S+ Q +V +TEAEY AL CA D+ W+R +L +LG P T+ DN + ++ AT + +H+ V+YH++RE +++++ +I+T +Q+ D+ TKAL F Sbjct: 427 KRNSDGSIARYKARLVAKGYHQQQGMDYDETFSPVVKPATVRLILSIAAQQNWSLKQLDVSNAFLHGLLKENVYMQQPPGFIDPQYPKHVCQLQKALYGLKQAPRAWFERFTSHLLTMGFTPSLADPSLFLYRQGSTVVYLLLYVDDIIVTGNQPTVVQSLITKLAQEFDIKDLGQLKFFLGLQIDYRSSGFFVH--QQKYATDLLAKFNMSTCKPCSTPF-----VSLSRIRKDDGIPLSDPTPFRSMVGGLQYLTFTRPDLSYAVNHICQFMHQPTDHHLVAAKRILRYVQGTLHHGLTFRPGPLSLTAFTDSDWAGDPMDRRSTTGLIVFLGHNPITWQSKKQPTVARSSTEAEYRALANCAADLAWVRMVLKDLGIFLHAPPTIWCDNLSALALATNPVFHARTKHVEVDYHFIREKVTNRDLQLHHISTDDQLADILTKALPSPRF 870
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Match: A0A2N9HB73_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HB73_FAGSY) HSP 1 Score: 258 bits (658), Expect = 3.970e-76 Identity = 163/452 (36.06%), Postives = 241/452 (53.32%), Query Frame = 1 Query: 7 KKIEDGVLKKYKGRLVAKGYSQQPGIDYAATFAPVVSAPSLRVILSLAAEQGLSLSQLDVQTAFLNGTLTEELYMEQPEGFRDPEFPDHVWKLKKSLYGLKQSPRC*-------------------------KVGDAVTYVTIYVDDIAIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYKANEDDINRFRPWWGLLAGSQ------PGQT-----LCCCRQG------------LQISEGSGNKSIKLGGGTI-LCAYCDADFCTDRVDGKSVTGYIVFLGDSPVVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEDNTACISWATEITVTRKNRHLHVNYHYVRELFQQKEIEVKYINTSEQVGDLFTKALNEKSFE 1215 K+ DG + +YK RLVAKG+ QQ G+DYA TF+PVV P++R+ILSLAA+ +L QLDV AFL+G L E +YM QP GF D + HV L KSLYGLKQ+PR K G + Y+ +YVDDI I +D V+ + + L + + D G L FLGL+I+ K V QS++I D L+KF C A TP+ + LS + D + P+ L+ Q P T +C C L+ +GS +K + G + L A+ DAD+ D VD +S +G VFLG++P+ W S+ Q +V+ +TEAEY +L A ++ WLR ++ +LG + DNT+ ++ A+ + + +H+ V+YH+VRE + +I +++I+T +QV D+FTKAL F+ Sbjct: 187 KRATDGSVSRYKARLVAKGFHQQVGVDYAETFSPVVKPPTVRIILSLAAQNRWNLCQLDVSNAFLHGFLKETVYMAQPTGFIDVDQSSHVCHLHKSLYGLKQAPRAWFERFTSHLLTLGFTASVADASLFVLKQGSVIVYLLLYVDDIIITGSDSTVVSTIISQLSTTFEVKDLGPLRYFLGLQIDYK--KAGFFVHQSKYITDLLMKFKMSDCKAASTPIATSPVLSTSCS-----DSLADPTPYRSLVGALQYATFTRPNITFAVNRVCQCMHNSSSAHLVVAKRILRYLKGSLDKGVLFQPGPLTLTAFTDADWAGDPVDRRSTSGITVFLGNNPITWLSKKQHTVSRSSTEAEYRSLATGAAELAWLRQVICDLGLYLSSAPIMWCDNTSALALASSLVFHGRTKHIEVDYHFVRERVVRGDICLQFISTDDQVADIFTKALPTPRFQ 631 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1042.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1042.3.1 >prot_H-akashiwo_Contig1042.3.1 ID=prot_H-akashiwo_Contig1042.3.1|Name=mRNA_H-akashiwo_Contig1042.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=209bp MDPTMDLSVNKEYKANEDDINRFRPWWGLLAGSQPGQTLCCCRQGLQISEback to top mRNA from alignment at H-akashiwo_Contig1042:58352..59707- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1042.3.1 ID=mRNA_H-akashiwo_Contig1042.3.1|Name=mRNA_H-akashiwo_Contig1042.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1356bp|location=Sequence derived from alignment at H-akashiwo_Contig1042:58352..59707- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1042:58352..59707- >mRNA_H-akashiwo_Contig1042.3.1 ID=mRNA_H-akashiwo_Contig1042.3.1|Name=mRNA_H-akashiwo_Contig1042.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=627bp|location=Sequence derived from alignment at H-akashiwo_Contig1042:58352..59707- (Heterosigma akashiwo CCMP452)back to top |